MGE detailed information
MGE type: IScluster/Tn MGE length: 12426 bp
Accession: NZ_CP024466 Location: 2158300..2170725 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Accession: NZ_CP024466 Location: 2158300..2170725 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ97_RS12040 () | 2154216..2155229 | + | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
| CPZ97_RS12045 () | 2155226..2156056 | - | 831 | WP_134802075.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| CPZ97_RS12050 () | 2156053..2156376 | - | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| CPZ97_RS12060 () | 2156587..2156994 | - | 408 | Protein_2272 | pentapeptide repeat-containing protein | - |
| CPZ97_RS12065 () | 2157050..2157747 | + | 698 | Protein_2273 | IS1 family transposase | - |
| CPZ97_RS12070 () | 2157763..2158284 | - | 522 | Protein_2274 | pentapeptide repeat-containing protein | - |
| CPZ97_RS12085 () | 2159318..2160079 | + | 762 | Protein_2276 | pentapeptide repeat-containing protein | - |
| CPZ97_RS12090 () | 2160137..2160831 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS12100 () | 2161235..2161752 | + | 518 | Protein_2278 | lipoprotein | - |
| CPZ97_RS12105 () | 2161970..2162698 | + | 729 | WP_000027205.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CPZ97_RS12110 () | 2162716..2163447 | + | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| CPZ97_RS12115 () | 2163454..2164170 | + | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| CPZ97_RS12120 () | 2164170..2164838 | + | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| CPZ97_RS12125 () | 2165129..2165449 | + | 321 | Protein_2283 | hypothetical protein | VF |
| CPZ97_RS12140 () | 2166216..2166356 | - | 141 | Protein_2285 | HNH endonuclease | - |
| CPZ97_RS12145 () | 2166394..2167116 | - | 723 | WP_134802076.1 | DNA-binding protein | - |
| CPZ97_RS12150 () | 2167191..2167868 | - | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| CPZ97_RS12155 () | 2168189..2168518 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPZ97_RS12160 () | 2168508..2168816 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CPZ97_RS12165 () | 2168813..2169034 | - | 222 | WP_001254231.1 | NinE family protein | - |
| CPZ97_RS12170 () | 2169031..2169441 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| CPZ97_RS12180 () | 2170859..2171863 | + | 1005 | Protein_2293 | tyrosine-type recombinase/integrase | - |
| CPZ97_RS12185 () | 2171921..2172481 | - | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| CPZ97_RS12190 () | 2172478..2172819 | - | 342 | Protein_2295 | DUF2138 family protein | - |
| CPZ97_RS12195 () | 2173055..2175682 | - | 2628 | WP_134802078.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|