MGE detailed information
MGE type: Prophage MGE length: 50440 bp
Accession: NZ_CP024466 Location: 2155226..2205665 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Accession: NZ_CP024466 Location: 2155226..2205665 Organism: Shigella dysenteriae strain BU53M1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPZ97_RS12030 () | 2151675..2152676 | + | 1002 | WP_000566392.1 | low-specificity L-threonine aldolase | - |
| CPZ97_RS12035 () | 2152687..2154117 | + | 1431 | WP_001136565.1 | SDR family oxidoreductase | - |
| CPZ97_RS12040 () | 2154216..2155229 | + | 1014 | WP_005016000.1 | NAD(P)-dependent oxidoreductase | - |
| CPZ97_RS12045 () | 2155226..2156056 | - | 831 | WP_134802075.1 | N-acetylmuramoyl-L-alanine amidase AmiD | - |
| CPZ97_RS12050 () | 2156053..2156376 | - | 324 | WP_001160737.1 | heavy metal-binding domain-containing protein | - |
| CPZ97_RS12060 () | 2156587..2156994 | - | 408 | Protein_2272 | pentapeptide repeat-containing protein | - |
| CPZ97_RS12065 () | 2157050..2157747 | + | 698 | Protein_2273 | IS1 family transposase | - |
| CPZ97_RS12070 () | 2157763..2158284 | - | 522 | Protein_2274 | pentapeptide repeat-containing protein | - |
| CPZ97_RS12085 () | 2159318..2160079 | + | 762 | Protein_2276 | pentapeptide repeat-containing protein | - |
| CPZ97_RS12090 () | 2160137..2160831 | + | 695 | WP_134801557.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS12100 () | 2161235..2161752 | + | 518 | Protein_2278 | lipoprotein | - |
| CPZ97_RS12105 () | 2161970..2162698 | + | 729 | WP_000027205.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CPZ97_RS12110 () | 2162716..2163447 | + | 732 | WP_000756570.1 | arginine ABC transporter substrate-binding protein | - |
| CPZ97_RS12115 () | 2163454..2164170 | + | 717 | WP_001001693.1 | arginine ABC transporter permease ArtQ | - |
| CPZ97_RS12120 () | 2164170..2164838 | + | 669 | WP_000464490.1 | arginine ABC transporter permease ArtM | - |
| CPZ97_RS12125 () | 2165129..2165449 | + | 321 | Protein_2283 | hypothetical protein | VF |
| CPZ97_RS12140 () | 2166216..2166356 | - | 141 | Protein_2285 | HNH endonuclease | - |
| CPZ97_RS12145 () | 2166394..2167116 | - | 723 | WP_134802076.1 | DNA-binding protein | - |
| CPZ97_RS12150 () | 2167191..2167868 | - | 678 | WP_000957540.1 | phage antirepressor Ant | - |
| CPZ97_RS12155 () | 2168189..2168518 | + | 330 | WP_024258354.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CPZ97_RS12160 () | 2168508..2168816 | + | 309 | WP_000147081.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| CPZ97_RS12165 () | 2168813..2169034 | - | 222 | WP_001254231.1 | NinE family protein | - |
| CPZ97_RS12170 () | 2169031..2169441 | - | 411 | WP_000814621.1 | recombination protein NinB | - |
| CPZ97_RS12180 () | 2170859..2171863 | + | 1005 | Protein_2293 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CPZ97_RS12185 () | 2171921..2172481 | - | 561 | WP_001215754.1 | DUF1175 domain-containing protein | - |
| CPZ97_RS12190 () | 2172478..2172819 | - | 342 | Protein_2295 | DUF2138 family protein | - |
| CPZ97_RS12195 () | 2173055..2175682 | - | 2628 | WP_134802078.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| CPZ97_RS12200 () | 2175829..2176551 | + | 723 | WP_000990765.1 | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | - |
| CPZ97_RS12205 () | 2176692..2180444 | - | 3753 | Protein_2298 | AIDA-I family autotransporter adhesin YfaL/EhaC | - |
| CPZ97_RS12210 () | 2181140..2183425 | + | 2286 | WP_001075157.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| CPZ97_RS12215 () | 2183571..2184701 | + | 1131 | WP_000332037.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| CPZ97_RS12220 () | 2184701..2184955 | + | 255 | WP_000124825.1 | ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE | - |
| CPZ97_RS12225 () | 2185009..2185659 | - | 651 | Protein_2302 | lipopolysaccharide kinase InaA | - |
| CPZ97_RS12230 () | 2185740..2186930 | - | 1191 | WP_000660231.1 | MFS transporter | - |
| CPZ97_RS12235 () | 2187095..2187966 | + | 872 | Protein_2304 | LysR family transcriptional regulator | - |
| CPZ97_RS12240 () | 2188011..2189090 | - | 1080 | WP_000779098.1 | glycerophosphodiester phosphodiesterase | - |
| CPZ97_RS12245 () | 2189095..2190453 | - | 1359 | WP_000948705.1 | glycerol-3-phosphate transporter | - |
| CPZ97_RS12250 () | 2190726..2192354 | + | 1629 | WP_000857263.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit A | - |
| CPZ97_RS12255 () | 2192344..2193603 | + | 1260 | WP_001209957.1 | glycerol-3-phosphate dehydrogenase subunit GlpB | - |
| CPZ97_RS12260 () | 2193600..2194790 | + | 1191 | WP_001000380.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit C | - |
| CPZ97_RS12265 () | 2194983..2195909 | + | 927 | WP_000140558.1 | hypothetical protein | VF |
| CPZ97_RS12270 () | 2195950..2196753 | - | 804 | WP_134802079.1 | 2-keto-3-deoxy-L-rhamnonate aldolase | - |
| CPZ97_RS12275 () | 2196771..2197847 | - | 1077 | Protein_2312 | MFS transporter | - |
| CPZ97_RS12280 () | 2197905..2198602 | + | 698 | WP_134801667.1 | IS1 family transposase | - |
| CPZ97_RS12285 () | 2198612..2199634 | + | 1023 | WP_094110609.1 | L-rhamnonate dehydratase | - |
| CPZ97_RS12290 () | 2199691..2199909 | + | 219 | Protein_2315 | MFS transporter | - |
| CPZ97_RS12295 () | 2199925..2200622 | - | 698 | Protein_2316 | IS1 family transposase | - |
| CPZ97_RS12300 () | 2200678..2200875 | - | 198 | Protein_2317 | L-rhamnonate dehydratase | - |
| CPZ97_RS12305 () | 2200890..2201348 | - | 459 | Protein_2318 | hypothetical protein | VF |
| CPZ97_RS27680 () | 2201287..2201427 | - | 141 | WP_171547755.1 | hypothetical protein | - |
| CPZ97_RS12315 () | 2201407..2202101 | + | 695 | WP_134802080.1 | IS1 family transposase IS1N | Transposase |
| CPZ97_RS12320 () | 2202116..2202712 | + | 597 | Protein_2321 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| CPZ97_RS12325 () | 2202716..2203683 | + | 968 | Protein_2322 | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | - |
| CPZ97_RS12330 () | 2203683..2205665 | + | 1983 | Protein_2323 | Bifunctional polymyxin resistance protein ArnA | VF |
| CPZ97_RS12335 () | 2205662..2206552 | + | 891 | WP_000169752.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
| CPZ97_RS12340 () | 2206552..2208204 | + | 1653 | WP_000844007.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
| CPZ97_RS12345 () | 2208201..2208536 | + | 336 | WP_000638028.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
| CPZ97_RS12350 () | 2208536..2208922 | + | 387 | WP_000523884.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
| CPZ97_RS12355 () | 2208916..2209180 | - | 265 | Protein_2328 | signal transduction protein PmrD | - |
| CPZ97_RS12360 () | 2209290..2210645 | - | 1356 | WP_000577578.1 | o-succinylbenzoate--CoA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|