MGE detailed information
MGE type: Genomic_island MGE length: 13414 bp
Accession: NZ_CP024315 Location: 2354062..2367475 Organism: Rhodococcus ruber strain P14 Replicon: chromosome
Accession: NZ_CP024315 Location: 2354062..2367475 Organism: Rhodococcus ruber strain P14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS378_RS10455 () | 2349541..2349993 | - | 453 | WP_010593309.1 | MarR family transcriptional regulator | - |
| CS378_RS10460 () | 2350133..2351317 | + | 1185 | WP_010593310.1 | MFS transporter | - |
| CS378_RS10465 () | 2351522..2352088 | - | 567 | WP_029539935.1 | dihydrofolate reductase family protein | - |
| CS378_RS10470 () | 2352295..2352918 | - | 624 | WP_010593312.1 | GyrI-like domain-containing protein | - |
| CS378_RS10480 () | 2353148..2353759 | - | 612 | Protein_2072 | ABC transporter permease | - |
| CS378_RS25670 () | 2353763..2354065 | - | 303 | Protein_2073 | DUF1048 domain-containing protein | - |
| CS378_RS10485 () | 2354062..2354391 | - | 330 | WP_010593314.1 | PadR family transcriptional regulator | - |
| CS378_RS10490 () | 2354673..2356181 | + | 1509 | WP_010593315.1 | hypothetical protein | - |
| CS378_RS10495 () | 2356217..2357326 | + | 1110 | WP_010593316.1 | hypothetical protein | - |
| CS378_RS10500 () | 2357683..2358963 | - | 1281 | WP_010593317.1 | multidrug effflux MFS transporter | - |
| CS378_RS10505 () | 2359044..2360066 | - | 1023 | WP_010593318.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| CS378_RS10510 () | 2360209..2361102 | + | 894 | WP_010593319.1 | helix-turn-helix transcriptional regulator | - |
| CS378_RS10515 () | 2361136..2362878 | - | 1743 | WP_157179996.1 | hypothetical protein | - |
| CS378_RS10520 () | 2363124..2363621 | - | 498 | WP_010593321.1 | hypothetical protein | - |
| CS378_RS10525 () | 2363985..2365043 | - | 1059 | WP_010593322.1 | mannan endo-1,4-beta-mannosidase | - |
| CS378_RS10530 () | 2365230..2365478 | + | 249 | WP_029539937.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| CS378_RS10535 () | 2365475..2365855 | + | 381 | WP_043804893.1 | type II toxin-antitoxin system VapC family toxin | - |
| CS378_RS10540 () | 2366008..2366847 | + | 840 | WP_010593325.1 | hypothetical protein | - |
| CS378_RS10545 () | 2366910..2367266 | - | 357 | WP_010593326.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CS378_RS10550 () | 2367263..2367475 | - | 213 | WP_010593327.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| CS378_RS10555 () | 2367686..2368267 | + | 582 | WP_010593328.1 | GNAT family N-acetyltransferase | - |
| CS378_RS10560 () | 2368275..2368670 | - | 396 | Protein_2089 | hypothetical protein | - |
| CS378_RS10565 () | 2368794..2370077 | + | 1284 | WP_029539938.1 | competence/damage-inducible protein A | - |
| CS378_RS10570 () | 2370522..2371433 | + | 912 | WP_029539939.1 | formylglycine-generating enzyme family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|