MGE detailed information
MGE type: Genomic_island MGE length: 41283 bp
Accession: NZ_CP024289 Location: 3212701..3253983 Organism: Escherichia coli O178:H19 strain 2012C-4431 Replicon: chromosome
Accession: NZ_CP024289 Location: 3212701..3253983 Organism: Escherichia coli O178:H19 strain 2012C-4431 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5960_RS16825 () | 3208020..3208922 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| A5960_RS16830 () | 3208942..3209445 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| A5960_RS16835 () | 3209458..3209988 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| A5960_RS16840 () | 3209998..3212634 | - | 2637 | WP_000121021.1 | fimbrial usher FimD | - |
| A5960_RS16845 () | 3212701..3213426 | - | 726 | WP_000066573.1 | type 1 fimbria chaperone FimC | - |
| A5960_RS16850 () | 3213463..3214002 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| A5960_RS16855 () | 3214067..3214615 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| A5960_RS16865 () | 3215095..3215691 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| A5960_RS16870 () | 3216169..3216771 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| A5960_RS16885 () | 3218226..3218942 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| A5960_RS16890 () | 3218962..3220068 | + | 1107 | WP_001542605.1 | N-acetylneuraminate epimerase | - |
| A5960_RS16895 () | 3220133..3221113 | + | 981 | WP_033547771.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| A5960_RS16900 () | 3221121..3221243 | - | 123 | WP_001338066.1 | hypothetical protein | - |
| A5960_RS16905 () | 3221325..3222197 | + | 873 | WP_000168559.1 | HNH endonuclease | - |
| A5960_RS16910 () | 3222367..3224442 | + | 2076 | WP_033547770.1 | AAA family ATPase | - |
| A5960_RS16915 () | 3224435..3225778 | + | 1344 | WP_000504877.1 | McrC family protein | - |
| A5960_RS16920 () | 3225775..3226161 | + | 387 | WP_000148644.1 | hypothetical protein | - |
| A5960_RS16925 () | 3226212..3228359 | + | 2148 | WP_001040176.1 | N-6 DNA methylase | - |
| A5960_RS16930 () | 3228359..3229831 | + | 1473 | WP_028985238.1 | restriction endonuclease subunit S | - |
| A5960_RS16935 () | 3229849..3231135 | + | 1287 | WP_099528416.1 | hypothetical protein | - |
| A5960_RS16940 () | 3231132..3235418 | + | 4287 | WP_028985239.1 | hypothetical protein | - |
| A5960_RS16945 () | 3235429..3236277 | + | 849 | WP_028985240.1 | hypothetical protein | - |
| A5960_RS16950 () | 3236280..3237437 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| A5960_RS16955 () | 3237427..3239112 | + | 1686 | WP_000323665.1 | ATP-binding protein | - |
| A5960_RS16960 () | 3239249..3239662 | + | 414 | WP_001368082.1 | hypothetical protein | - |
| A5960_RS16965 () | 3239659..3241128 | + | 1470 | WP_001022619.1 | serine/threonine protein kinase | - |
| A5960_RS16970 () | 3241330..3242594 | - | 1265 | Protein_3116 | tyrosine-type recombinase/integrase | - |
| A5960_RS16975 () | 3243091..3243465 | - | 375 | WP_033805147.1 | TA system toxin CbtA family protein | Toxin Detail |
| A5960_RS16980 () | 3243504..3243869 | - | 366 | WP_033805146.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| A5960_RS16985 () | 3243895..3244116 | - | 222 | WP_033805145.1 | DUF987 domain-containing protein | - |
| A5960_RS16990 () | 3244113..3244655 | - | 543 | WP_033805144.1 | DNA repair protein RadC | - |
| A5960_RS16995 () | 3244668..3245108 | - | 441 | WP_033805143.1 | antirestriction protein | - |
| A5960_RS17000 () | 3245139..3245960 | - | 822 | WP_047082063.1 | DUF945 domain-containing protein | - |
| A5960_RS17005 () | 3246062..3246292 | - | 231 | WP_033805141.1 | DUF905 domain-containing protein | - |
| A5960_RS17010 () | 3246364..3246813 | - | 450 | WP_033805140.1 | hypothetical protein | - |
| A5960_RS17015 () | 3246810..3247262 | - | 453 | WP_033805139.1 | hypothetical protein | - |
| A5960_RS17020 () | 3247299..3247868 | - | 570 | WP_033805138.1 | hypothetical protein | - |
| A5960_RS17025 () | 3247868..3248572 | - | 705 | WP_033805137.1 | WYL domain-containing protein | - |
| A5960_RS17030 () | 3248772..3249647 | - | 876 | WP_033805136.1 | GTPase family protein | - |
| A5960_RS17035 () | 3249748..3250524 | - | 777 | WP_033805151.1 | hypothetical protein | - |
| A5960_RS17040 () | 3251164..3251370 | + | 207 | WP_033805135.1 | AlpA family transcriptional regulator | - |
| A5960_RS17045 () | 3251467..3252060 | + | 594 | WP_033805134.1 | hypothetical protein | - |
| A5960_RS17050 () | 3252257..3252832 | + | 576 | WP_033805133.1 | inovirus-type Gp2 protein | - |
| A5960_RS17055 () | 3253004..3253321 | + | 318 | WP_045133805.1 | hypothetical protein | - |
| A5960_RS17060 () | 3253621..3253983 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| A5960_RS17065 () | 3254040..3256295 | - | 2256 | WP_001083255.1 | hypothetical protein | - |
| A5960_RS17070 () | 3256292..3256834 | - | 543 | WP_001097549.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|