MGE detailed information
MGE type: Prophage MGE length: 45695 bp
Accession: NZ_CP024282 Location: 4243424..4289118 Organism: Escherichia albertii strain 2014C-4356 Replicon: chromosome
Accession: NZ_CP024282 Location: 4243424..4289118 Organism: Escherichia albertii strain 2014C-4356 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCF14_RS21680 () | 4239262..4240125 | + | 864 | WP_059217927.1 | spermidine/putrescine ABC transporter permease PotB | - |
| CCF14_RS21685 () | 4240358..4240522 | - | 165 | WP_001357468.1 | tail fiber assembly protein | - |
| CCF14_RS21690 () | 4240631..4240716 | + | 86 | Protein_3986 | YkgJ family cysteine cluster protein | - |
| CCF14_RS21695 () | 4240739..4241329 | - | 591 | WP_099588087.1 | T3SS effector guanine nucleotide exchange factor EspM2 | - |
| CCF14_RS21700 () | 4241513..4242139 | + | 627 | WP_024262848.1 | T3SS effector NleG family protein | - |
| CCF14_RS21705 () | 4242240..4243298 | + | 1059 | WP_099588088.1 | T3SS effector EspW | - |
| CCF14_RS21710 () | 4243424..4244059 | - | 636 | WP_099588089.1 | hypothetical protein | VF |
| CCF14_RS21715 () | 4244331..4244600 | - | 270 | WP_062859942.1 | phage tail fiber C-terminal domain-containing protein | - |
| CCF14_RS21720 () | 4244602..4245915 | - | 1314 | WP_099588090.1 | ISNCY family transposase KIS | Transposase |
| CCF14_RS21725 () | 4245977..4249385 | - | 3409 | Protein_3993 | host specificity protein J | - |
| CCF14_RS21730 () | 4249446..4250093 | - | 648 | WP_099588091.1 | tail assembly protein | - |
| CCF14_RS21735 () | 4249991..4250734 | - | 744 | WP_099588092.1 | C40 family peptidase | - |
| CCF14_RS21740 () | 4250739..4251437 | - | 699 | WP_099588093.1 | phage minor tail protein L | - |
| CCF14_RS21745 () | 4251437..4251778 | - | 342 | WP_001114907.1 | phage tail protein | - |
| CCF14_RS21750 () | 4251771..4254998 | - | 3228 | WP_099588094.1 | phage tail tape measure protein | - |
| CCF14_RS21755 () | 4255045..4255323 | - | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| CCF14_RS21760 () | 4255347..4255718 | - | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| CCF14_RS21765 () | 4255733..4256374 | - | 642 | Protein_4001 | phage tail protein | - |
| CCF14_RS21775 () | 4256428..4257105 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS21780 () | 4257105..4257452 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS21785 () | 4257472..4259043 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| CCF14_RS28435 () | 4259073..4259144 | - | 72 | Protein_4005 | phage tail protein | - |
| CCF14_RS21795 () | 4259204..4259548 | - | 345 | WP_047627858.1 | DUF3168 domain-containing protein | - |
| CCF14_RS21800 () | 4259545..4259991 | - | 447 | WP_198406513.1 | HK97 gp10 family phage protein | - |
| CCF14_RS21805 () | 4259991..4260329 | - | 339 | WP_001147814.1 | phage head closure protein | - |
| CCF14_RS21810 () | 4260338..4260655 | - | 318 | WP_000719066.1 | head-tail connector protein | - |
| CCF14_RS21815 () | 4260732..4261949 | - | 1218 | WP_000766109.1 | phage major capsid protein | - |
| CCF14_RS21820 () | 4261964..4262563 | - | 600 | WP_099588097.1 | HK97 family phage prohead protease | - |
| CCF14_RS21825 () | 4262556..4263782 | - | 1227 | WP_099588098.1 | phage portal protein | - |
| CCF14_RS28440 () | 4263772..4263933 | - | 162 | WP_000811487.1 | hypothetical protein | - |
| CCF14_RS21830 () | 4263930..4265687 | - | 1758 | WP_099588099.1 | terminase large subunit | - |
| CCF14_RS21835 () | 4265687..4266169 | - | 483 | WP_099588100.1 | phage terminase small subunit P27 family | - |
| CCF14_RS21840 () | 4266312..4266656 | - | 345 | Protein_4016 | HNH endonuclease | - |
| CCF14_RS21845 () | 4266677..4266973 | - | 297 | WP_099588101.1 | hypothetical protein | - |
| CCF14_RS21850 () | 4267043..4267243 | - | 201 | WP_052931673.1 | Rz1 family lipoprotein | - |
| CCF14_RS28445 () | 4267465..4267602 | - | 138 | WP_198406514.1 | hypothetical protein | - |
| CCF14_RS21855 () | 4267760..4268293 | - | 534 | WP_025237239.1 | lysozyme | - |
| CCF14_RS21860 () | 4268357..4268707 | - | 351 | WP_052931675.1 | YdfR family protein | - |
| CCF14_RS21865 () | 4268712..4268927 | - | 216 | WP_000839572.1 | class II holin family protein | - |
| CCF14_RS21885 () | 4269727..4270545 | - | 819 | WP_072250181.1 | CPBP family intramembrane metalloprotease | - |
| CCF14_RS21890 () | 4270688..4271056 | - | 369 | WP_059217965.1 | antitermination protein | - |
| CCF14_RS21895 () | 4271049..4271426 | - | 378 | WP_059274539.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CCF14_RS21900 () | 4271427..4272482 | - | 1056 | WP_099588102.1 | DUF968 domain-containing protein | - |
| CCF14_RS21905 () | 4272484..4272762 | - | 279 | WP_059274501.1 | hypothetical protein | - |
| CCF14_RS21910 () | 4272930..4273085 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 4273097..4273155 | + | 59 | - | - | Antitoxin Detail |
| CCF14_RS21915 () | 4273691..4274464 | + | 774 | WP_059274496.1 | alpha/beta hydrolase | - |
| CCF14_RS21920 () | 4274820..4275230 | - | 411 | WP_059274497.1 | DUF977 family protein | - |
| CCF14_RS21925 () | 4275238..4275999 | - | 762 | WP_059274498.1 | DUF1627 domain-containing protein | - |
| CCF14_RS21930 () | 4276023..4276769 | - | 747 | WP_059274499.1 | ATP-binding protein | - |
| CCF14_RS21935 () | 4276776..4277738 | - | 963 | WP_072250167.1 | helix-turn-helix domain-containing protein | - |
| CCF14_RS21940 () | 4277762..4278187 | - | 426 | WP_059217916.1 | Rha family transcriptional regulator | - |
| CCF14_RS21945 () | 4278210..4278506 | - | 297 | WP_059217915.1 | toxin YdaS | - |
| CCF14_RS21950 () | 4278630..4279106 | + | 477 | WP_099588103.1 | DNA-binding transcriptional repressor RacR | - |
| CCF14_RS21960 () | 4279424..4279576 | + | 153 | WP_032205458.1 | DUF1391 family protein | - |
| CCF14_RS21965 () | 4279588..4279962 | + | 375 | WP_059274551.1 | hypothetical protein | - |
| CCF14_RS28450 () | 4279948..4280301 | - | 354 | WP_198406517.1 | hypothetical protein | - |
| CCF14_RS21980 () | 4280492..4280680 | + | 189 | WP_000449200.1 | hypothetical protein | - |
| CCF14_RS21985 () | 4280677..4280868 | + | 192 | WP_001090222.1 | DUF1482 family protein | - |
| CCF14_RS21990 () | 4280962..4283433 | + | 2472 | WP_099588104.1 | exonuclease | - |
| CCF14_RS21995 () | 4283495..4283764 | + | 270 | WP_000003742.1 | excisionase | - |
| CCF14_RS22000 () | 4283733..4284851 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| CCF14_RS22005 () | 4285018..4285812 | + | 795 | WP_000580318.1 | spermidine/putrescine ABC transporter permease PotC | - |
| CCF14_RS22010 () | 4285809..4286855 | + | 1047 | WP_054410786.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| CCF14_RS22015 () | 4286913..4287374 | + | 462 | WP_032330099.1 | DUF3592 domain-containing protein | - |
| CCF14_RS22020 () | 4287371..4288159 | + | 789 | WP_059259568.1 | hypothetical protein | - |
| CCF14_RS22025 () | 4288297..4289118 | - | 822 | WP_000952753.1 | NAD-dependent protein deacylase | - |
| CCF14_RS22030 () | 4289134..4290045 | - | 912 | WP_000291317.1 | N-acetylglucosamine kinase | - |
| CCF14_RS22035 () | 4290073..4291317 | - | 1245 | WP_001251383.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| CCF14_RS22040 () | 4291317..4292018 | - | 702 | WP_001059716.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| CCF14_RS22045 () | 4292011..4293210 | - | 1200 | WP_000284708.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|