MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 169693 bp
Accession: NZ_CP024278 Location: 718465..888157 Organism: Escherichia coli strain ATCC 43896 Replicon: chromosome
Accession: NZ_CP024278 Location: 718465..888157 Organism: Escherichia coli strain ATCC 43896 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS031_RS03730 () | 716609..717907 | + | 1299 | WP_000841103.1 | alpha-ketoglutarate permease | - |
| CS031_RS03735 () | 717904..718227 | - | 324 | WP_001300818.1 | YfiM family lipoprotein | - |
| CS031_RS03740 () | 718273..719628 | - | 1356 | WP_000949265.1 | CDP-diacylglycerol--serine O-phosphatidyltransferase | - |
| CS031_RS28185 () | 719612..719653 | - | 42 | WP_211180504.1 | protein PssL | - |
| CS031_RS03745 () | 719742..722402 | - | 2661 | WP_000082969.1 | protein lysine acetyltransferase | - |
| CS031_RS03750 () | 722434..723132 | - | 699 | WP_001343689.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| CS031_RS03755 () | 723201..723620 | - | 420 | WP_001098726.1 | thioredoxin TrxC | - |
| CS031_RS03765 () | 723827..724864 | + | 1038 | WP_001760210.1 | tRNA/rRNA methyltransferase | - |
| CS031_RS03770 () | 724912..725601 | - | 690 | WP_001262723.1 | uracil-DNA glycosylase | - |
| CS031_RS03775 () | 725906..726289 | + | 384 | WP_000627807.1 | autonomous glycyl radical cofactor GrcA | - |
| CS031_RS03780 () | 726344..726931 | - | 588 | WP_000189206.1 | cysteine/O-acetylserine transporter | - |
| CS031_RS03785 () | 727034..727915 | + | 882 | WP_001297408.1 | LysR family transcriptional regulator | - |
| CS031_RS03790 () | 727948..729282 | - | 1335 | WP_001696609.1 | ATP-dependent RNA helicase SrmB | - |
| CS031_RS03795 () | 729414..730151 | + | 738 | WP_001297411.1 | tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN | - |
| CS031_RS03800 () | 730136..731758 | - | 1623 | WP_001094498.1 | L-aspartate oxidase | - |
| CS031_RS27660 () | 732014..732169 | + | 156 | WP_001303621.1 | rpoE leader peptide RseD | - |
| CS031_RS03805 () | 732166..732741 | + | 576 | WP_001295364.1 | hypothetical protein | VF |
| CS031_RS03810 () | 732774..733424 | + | 651 | WP_001168459.1 | hypothetical protein | VF |
| CS031_RS03815 () | 733424..734380 | + | 957 | WP_000812053.1 | hypothetical protein | VF |
| CS031_RS03820 () | 734377..734856 | + | 480 | WP_000589070.1 | hypothetical protein | VF |
| CS031_RS03825 () | 735054..736853 | + | 1800 | WP_000790168.1 | translation elongation factor 4 | - |
| CS031_RS03830 () | 736869..737843 | + | 975 | WP_000002542.1 | signal peptidase I | - |
| CS031_RS03840 () | 738115..738795 | + | 681 | WP_001068343.1 | ribonuclease III | - |
| CS031_RS03845 () | 738792..739697 | + | 906 | WP_000020737.1 | GTPase Era | - |
| CS031_RS03850 () | 739709..740437 | + | 729 | WP_000399393.1 | DNA repair protein RecO | - |
| CS031_RS03855 () | 740449..741180 | + | 732 | WP_001297412.1 | Pyridoxine 5'-phosphate synthase | VF |
| CS031_RS03860 () | 741180..741560 | + | 381 | WP_000986029.1 | holo-ACP synthase | - |
| - () | 741582..741658 | - | 77 | NuclAT_12 | - | - |
| - () | 741582..741658 | - | 77 | NuclAT_12 | - | - |
| - () | 741582..741658 | - | 77 | NuclAT_12 | - | - |
| - () | 741582..741658 | - | 77 | NuclAT_12 | - | - |
| CS031_RS03875 () | 741981..742061 | + | 81 | WP_000128776.1 | type I toxin-antitoxin system toxin ShoB | - |
| CS031_RS03880 () | 742255..742515 | - | 261 | WP_001196283.1 | 4Fe-4S dicluster ferredoxin YfhL | - |
| CS031_RS03885 () | 742571..743419 | - | 849 | WP_001013779.1 | MurR/RpiR family transcriptional regulator | - |
| CS031_RS03890 () | 743628..744263 | + | 636 | WP_000190655.1 | phosphatidylglycerophosphatase C | - |
| CS031_RS03895 () | 744321..744824 | + | 504 | WP_001297409.1 | tRNA adenosine(34) deaminase TadA | - |
| CS031_RS03900 () | 744821..746377 | - | 1557 | WP_000734193.1 | membrane-bound lytic murein transglycosylase MltF | - |
| CS031_RS03910 () | 746635..750522 | + | 3888 | WP_000970115.1 | phosphoribosylformylglycinamidine synthase | - |
| CS031_RS03915 () | 751098..752525 | + | 1428 | WP_001297612.1 | two component system sensor histidine kinase QseE/GlrK | - |
| CS031_RS03920 () | 752690..753403 | + | 714 | WP_001215888.1 | two-component system QseEF-associated lipoprotein QseG | - |
| CS031_RS03925 () | 753393..754727 | + | 1335 | WP_001298983.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| CS031_RS03930 () | 754788..755126 | + | 339 | WP_000717694.1 | nitrogen regulatory protein P-II | - |
| CS031_RS03935 () | 755171..756361 | - | 1191 | WP_000883124.1 | NO-inducible flavohemoprotein | - |
| CS031_RS03940 () | 756689..757942 | + | 1254 | WP_000919159.1 | serine hydroxymethyltransferase | - |
| CS031_RS03945 () | 758006..759199 | - | 1194 | WP_001299519.1 | ROK family protein | - |
| CS031_RS03950 () | 759317..762598 | + | 3282 | WP_001388179.1 | DUF5107 domain-containing protein | - |
| CS031_RS03955 () | 762695..763678 | + | 984 | WP_001124907.1 | substrate-binding domain-containing protein | - |
| CS031_RS03960 () | 763701..765212 | + | 1512 | WP_001696600.1 | sugar ABC transporter ATP-binding protein | - |
| CS031_RS03965 () | 765237..766235 | + | 999 | WP_001276671.1 | ABC transporter permease | - |
| CS031_RS03970 () | 766268..767362 | + | 1095 | WP_000700800.1 | zinc-binding dehydrogenase | - |
| CS031_RS03975 () | 767374..768246 | + | 873 | WP_000158551.1 | aldose 1-epimerase | - |
| CS031_RS03980 () | 768294..768716 | - | 423 | WP_001094726.1 | DoxX family protein | - |
| CS031_RS03985 () | 768813..770015 | - | 1203 | WP_000660797.1 | phenylpropionate dioxygenase ferredoxin reductase subunit | - |
| CS031_RS03990 () | 770025..770837 | - | 813 | WP_001281377.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | - |
| CS031_RS03995 () | 770834..771154 | - | 321 | WP_001080102.1 | bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | - |
| CS031_RS04000 () | 771154..771672 | - | 519 | WP_001276072.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| CS031_RS04005 () | 771669..773030 | - | 1362 | WP_000211172.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| CS031_RS04010 () | 773166..774056 | + | 891 | WP_000423257.1 | DNA-binding transcriptional regulator HcaR | - |
| CS031_RS04015 () | 774216..775355 | + | 1140 | WP_000244189.1 | 3-phenylpropionate MFS transporter | - |
| CS031_RS04020 () | 775347..776627 | - | 1281 | WP_000983009.1 | stationary phase inducible protein CsiE | - |
| CS031_RS04025 () | 776818..777672 | - | 855 | WP_001297705.1 | alpha/beta hydrolase | - |
| CS031_RS04030 () | 777817..778620 | - | 804 | WP_000553451.1 | inositol-1-monophosphatase | - |
| CS031_RS04035 () | 778739..779476 | + | 738 | WP_000940018.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| CS031_RS04040 () | 779777..780265 | + | 489 | WP_001241357.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| CS031_RS04045 () | 780377..781591 | + | 1215 | WP_001295373.1 | cysteine desulfurase | - |
| CS031_RS04050 () | 781619..782005 | + | 387 | WP_000331707.1 | Fe-S cluster assembly scaffold IscU | - |
| CS031_RS04055 () | 782022..782345 | + | 324 | WP_000028953.1 | iron-sulfur cluster assembly protein IscA | - |
| CS031_RS04060 () | 782441..782956 | + | 516 | WP_000384411.1 | co-chaperone HscB | - |
| CS031_RS04065 () | 782973..784823 | + | 1851 | WP_001196613.1 | Fe-S protein assembly chaperone HscA | - |
| CS031_RS04070 () | 784825..785160 | + | 336 | WP_001124469.1 | ISC system 2Fe-2S type ferredoxin | - |
| CS031_RS04075 () | 785172..785372 | + | 201 | WP_000523616.1 | Fe-S cluster assembly protein IscX | - |
| CS031_RS04080 () | 785431..786714 | + | 1284 | WP_000133608.1 | aminopeptidase PepB | - |
| CS031_RS04085 () | 786856..787632 | + | 777 | WP_001297328.1 | enhanced serine sensitivity protein SseB | - |
| CS031_RS04090 () | 788125..788970 | - | 846 | WP_000108626.1 | 3-mercaptopyruvate sulfurtransferase | - |
| CS031_RS04095 () | 789177..794138 | + | 4962 | WP_001696560.1 | alpha2-macroglobulin | - |
| CS031_RS04100 () | 794139..796451 | + | 2313 | WP_001137684.1 | peptidoglycan glycosyltransferase PbpC | - |
| CS031_RS04105 () | 796600..797031 | + | 432 | WP_001696558.1 | nucleoside-diphosphate kinase | - |
| CS031_RS04110 () | 797181..798335 | + | 1155 | WP_000003317.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| CS031_RS04120 () | 798620..799633 | + | 1014 | WP_001090844.1 | cytoskeleton protein RodZ | - |
| CS031_RS04125 () | 799660..800778 | + | 1119 | WP_000551820.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| CS031_RS04130 () | 800889..802163 | + | 1275 | WP_001107180.1 | histidine--tRNA ligase | - |
| CS031_RS04135 () | 802181..802801 | + | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| CS031_RS04140 () | 802812..803990 | + | 1179 | WP_001177043.1 | outer membrane protein assembly factor BamB | - |
| CS031_RS04145 () | 804108..805580 | + | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| CS031_RS04150 () | 805649..805864 | + | 216 | WP_001297332.1 | zinc ribbon domain-containing protein | - |
| CS031_RS04155 () | 805861..807231 | - | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| CS031_RS04160 () | 807393..808859 | + | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| CS031_RS04165 () | 808928..810505 | + | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| CS031_RS04175 () | 810814..812001 | + | 1188 | WP_001696555.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CS031_RS04180 () | 812050..814011 | + | 1962 | WP_000687641.1 | AAA family ATPase | - |
| CS031_RS04185 () | 814008..815873 | + | 1866 | WP_000199052.1 | ATP-dependent helicase | - |
| CS031_RS04190 () | 815997..817040 | - | 1044 | WP_001342896.1 | hypothetical protein | - |
| CS031_RS04195 () | 817136..817357 | + | 222 | WP_024168710.1 | AlpA family phage regulatory protein | - |
| CS031_RS04200 () | 817362..818225 | + | 864 | WP_001162383.1 | helicase RepA family protein | - |
| CS031_RS04205 () | 818212..818967 | + | 756 | WP_000206936.1 | hypothetical protein | - |
| CS031_RS04210 () | 820086..820862 | + | 777 | WP_001174503.1 | P-type conjugative transfer protein TrbJ | - |
| CS031_RS04215 () | 820865..821062 | + | 198 | WP_000790452.1 | hypothetical protein | - |
| CS031_RS04220 () | 821065..822360 | + | 1296 | WP_001409911.1 | P-type conjugative transfer protein TrbL | - |
| CS031_RS04225 () | 822416..822613 | + | 198 | WP_001076796.1 | hypothetical protein | - |
| CS031_RS04230 () | 822634..822888 | + | 255 | WP_000395519.1 | hypothetical protein | - |
| CS031_RS04235 () | 822961..823203 | + | 243 | WP_000213950.1 | type I toxin-antitoxin system ptaRNA1 family toxin | - |
| CS031_RS04240 () | 823236..824930 | - | 1695 | WP_001696538.1 | hypothetical protein | - |
| CS031_RS04250 () | 825462..826001 | - | 540 | WP_000755179.1 | DUF5384 family protein | - |
| CS031_RS04255 () | 826017..826535 | - | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| CS031_RS04265 () | 826846..827037 | - | 192 | WP_000076001.1 | DUF2633 family protein | - |
| CS031_RS28000 () | 827055..827207 | + | 153 | WP_000017552.1 | hypothetical protein | - |
| CS031_RS04275 () | 827389..829632 | + | 2244 | WP_000772726.1 | hypothetical protein | VF |
| CS031_RS04280 () | 829671..831212 | - | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| CS031_RS04285 () | 831217..833283 | - | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| CS031_RS04290 () | 833454..834092 | - | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| CS031_RS04295 () | 834092..835129 | - | 1038 | WP_001295474.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| CS031_RS04305 () | 835454..836080 | + | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| CS031_RS04310 () | 836166..837455 | + | 1290 | WP_000198328.1 | uracil permease | - |
| CS031_RS04315 () | 837550..838251 | + | 702 | WP_001307333.1 | DnaA inactivator Hda | - |
| CS031_RS04320 () | 838389..838748 | - | 360 | WP_000166467.1 | arsenate reductase (glutaredoxin) | - |
| CS031_RS04325 () | 838769..840232 | - | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| CS031_RS04330 () | 840445..841506 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| CS031_RS04340 () | 841544..842392 | - | 849 | WP_001244724.1 | formate transporter | - |
| CS031_RS04345 () | 842414..844426 | - | 2013 | WP_001251569.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| CS031_RS04350 () | 844456..844869 | - | 414 | WP_000133936.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| CS031_RS04355 () | 844862..845620 | - | 759 | WP_000075569.1 | hydrogenase 4 catalytic subunit HyfI | - |
| CS031_RS04360 () | 845617..846162 | - | 546 | WP_000916058.1 | hydrogenase 4 subunit H | - |
| CS031_RS04365 () | 846172..847839 | - | 1668 | WP_001102276.1 | hydrogenase 4 catalytic subunit HyfG | - |
| CS031_RS04370 () | 847829..849410 | - | 1582 | Protein_799 | hydrogenase 4 subunit F | - |
| CS031_RS04375 () | 849415..850065 | - | 651 | WP_000147987.1 | hydrogenase 4 membrane subunit | - |
| CS031_RS04380 () | 850077..851308 | - | 1232 | Protein_801 | hydrogenase 4 subunit D | - |
| CS031_RS04385 () | 851325..852272 | - | 948 | WP_001317255.1 | hydrogenase 4 subunit HyfC | - |
| CS031_RS04390 () | 852283..854300 | - | 2018 | Protein_803 | hydrogenase 4 subunit B | - |
| CS031_RS04395 () | 854300..854917 | - | 618 | WP_001299064.1 | hydrogenase 4 subunit HyfA | - |
| CS031_RS04400 () | 855170..855640 | - | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| CS031_RS04405 () | 855640..856212 | - | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| CS031_RS04410 () | 856358..857236 | + | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| CS031_RS04415 () | 857253..858287 | + | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| CS031_RS04420 () | 858500..859213 | + | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| CS031_RS04425 () | 859367..859594 | + | 228 | WP_001696518.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| CS031_RS04430 () | 859594..859992 | + | 399 | WP_000911329.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| CS031_RS04435 () | 860139..861002 | + | 864 | WP_001267498.1 | neutral zinc metallopeptidase | - |
| CS031_RS04440 () | 861017..863032 | + | 2016 | WP_001388162.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| CS031_RS04445 () | 863106..863804 | + | 699 | WP_000679812.1 | esterase | - |
| CS031_RS04450 () | 863885..864085 | - | 201 | WP_000383836.1 | YpfN family protein | - |
| CS031_RS04455 () | 864113..865240 | - | 1128 | WP_001277801.1 | succinyl-diaminopimelate desuccinylase | - |
| CS031_RS04460 () | 865244..865600 | - | 357 | WP_000258247.1 | ArsC family reductase | - |
| CS031_RS27665 () | 865981..866040 | + | 60 | WP_001386977.1 | protein YpfM | - |
| CS031_RS04475 () | 866139..869252 | - | 3114 | WP_001760194.1 | Multidrug resistance protein MdtB | VF |
| CS031_RS04480 () | 869416..871116 | - | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| CS031_RS04485 () | 871322..873301 | + | 1980 | WP_001078871.1 | formate-dependent uric acid utilization protein AegA | - |
| CS031_RS04490 () | 873369..873944 | + | 576 | WP_000193711.1 | GDP-mannose pyrophosphatase NudK | - |
| CS031_RS04495 () | 874070..875113 | + | 1044 | WP_001270528.1 | DUF1176 domain-containing protein | - |
| CS031_RS04500 () | 875209..877212 | - | 2004 | WP_096974495.1 | transketolase | - |
| CS031_RS04505 () | 877232..878182 | - | 951 | WP_001003709.1 | transaldolase | - |
| CS031_RS04510 () | 878471..880750 | + | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| CS031_RS04520 () | 881043..881378 | + | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| CS031_RS04525 () | 881391..881870 | + | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| CS031_RS04530 () | 881845..882546 | + | 702 | WP_000733903.1 | ethanolamine utilization acetate kinase EutQ | - |
| CS031_RS04535 () | 882543..883346 | + | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| CS031_RS04540 () | 883343..884359 | + | 1017 | WP_000582977.1 | phosphate acetyltransferase | - |
| CS031_RS04545 () | 884398..884691 | + | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| CS031_RS04550 () | 884798..885085 | + | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| CS031_RS04555 () | 885097..886500 | + | 1404 | WP_001075711.1 | Gamma-glutamyl phosphate reductase | VF |
| CS031_RS04560 () | 886511..887347 | + | 837 | WP_000929729.1 | ethanolamine utilization protein EutJ | - |
| CS031_RS04565 () | 887337..888524 | + | 1188 | WP_001315777.1 | ethanolamine utilization ethanol dehydrogenase EutG | - |
| CS031_RS04570 () | 888641..889867 | + | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| CS031_RS04575 () | 889864..891267 | + | 1404 | WP_001097478.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| CS031_RS04580 () | 891279..892640 | + | 1362 | WP_000769961.1 | ethanolamine ammonia-lyase subunit alpha | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|