MGE detailed information
MGE type: Mobilizable plasmid MGE length: 100184 bp
Accession: NZ_CP024277 Location: 1..100184 Organism: Escherichia coli O6:H16 strain M9682-C1 Replicon: plasmid unnamed2
Accession: NZ_CP024277 Location: 1..100184 Organism: Escherichia coli O6:H16 strain M9682-C1 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG40_RS25225 () | 477..824 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| COG40_RS25230 () | 844..2415 | + | 1572 | WP_047608463.1 | IS66 family transposase ISCro1 | Transposase |
| COG40_RS25235 () | 2419..3231 | - | 813 | WP_001393437.1 | hypothetical protein | - |
| COG40_RS25245 () | 4145..5002 | - | 858 | WP_000130971.1 | incFII family plasmid replication initiator RepA | - |
| COG40_RS25250 () | 4995..5069 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| COG40_RS25260 () | 5306..5560 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| COG40_RS25265 () | 5800..6390 | - | 591 | WP_001393319.1 | DUF2726 domain-containing protein | - |
| COG40_RS25270 () | 6542..7168 | - | 627 | WP_001393151.1 | hypothetical protein | - |
| COG40_RS25275 () | 7580..7789 | - | 210 | WP_001297500.1 | hypothetical protein | - |
| COG40_RS25280 () | 7920..8480 | - | 561 | WP_000840475.1 | fertility inhibition protein FinO | - |
| COG40_RS25285 () | 8583..9443 | - | 861 | WP_000704511.1 | putative protein YcjY | VF |
| COG40_RS25290 () | 9502..9984 | - | 483 | Protein_12 | type-F conjugative transfer system pilin acetylase TraX | - |
| COG40_RS25295 () | 9987..11192 | - | 1206 | Protein_13 | conjugal transfer protein TraH | - |
| COG40_RS25300 () | 11179..11571 | - | 393 | WP_000138370.1 | F-type conjugal transfer protein TrbF | - |
| COG40_RS25305 () | 11525..11899 | - | 375 | WP_071594518.1 | P-type conjugative transfer protein TrbJ | - |
| COG40_RS25310 () | 11829..12158 | - | 330 | Protein_16 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| COG40_RS25315 () | 12311..13039 | - | 729 | WP_001230775.1 | type-F conjugative transfer system secretin TraK | - |
| COG40_RS25320 () | 13026..13592 | - | 567 | WP_000399782.1 | type IV conjugative transfer system protein TraE | - |
| COG40_RS25325 () | 13614..13925 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| COG40_RS25330 () | 13930..14292 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| COG40_RS25335 () | 14325..14552 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| COG40_RS25340 () | 14689..15360 | - | 672 | WP_024171742.1 | conjugal transfer transcriptional regulator TraJ | - |
| COG40_RS25345 () | 15554..15937 | - | 384 | WP_000124827.1 | relaxosome protein TraM | - |
| COG40_RS25355 () | 16260..16862 | + | 603 | WP_013188482.1 | hypothetical protein | VF |
| COG40_RS25360 () | 17158..17979 | - | 822 | WP_001393327.1 | DUF945 domain-containing protein | - |
| COG40_RS25365 () | 18096..18383 | - | 288 | WP_000107522.1 | hypothetical protein | - |
| COG40_RS25375 () | 18539..18841 | - | 303 | WP_001272235.1 | hypothetical protein | - |
| COG40_RS26355 () | 19158..19518 | + | 361 | Protein_28 | hypothetical protein | - |
| COG40_RS25395 () | 19756..19914 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 19979..20173 | - | 195 | NuclAT_0 | - | - |
| - () | 19979..20173 | - | 195 | NuclAT_0 | - | - |
| - () | 19979..20173 | - | 195 | NuclAT_0 | - | - |
| - () | 19979..20173 | - | 195 | NuclAT_0 | - | - |
| COG40_RS25400 () | 20185..20904 | - | 720 | WP_001276221.1 | plasmid SOS inhibition protein A | - |
| COG40_RS25405 () | 20901..21335 | - | 435 | WP_047608279.1 | conjugation system SOS inhibitor PsiB | - |
| COG40_RS26360 () | 21390..23357 | - | 1968 | Protein_32 | ParB/RepB/Spo0J family partition protein | - |
| COG40_RS25420 () | 23432..23788 | - | 357 | Protein_33 | IS3 family transposase | - |
| COG40_RS25425 () | 23853..25004 | + | 1152 | WP_001254933.1 | IS30 family transposase IS30D | Transposase |
| COG40_RS25430 () | 25011..25907 | + | 897 | Protein_35 | IS3 family transposase ISSd1 | Transposase |
| COG40_RS25435 () | 26228..26602 | - | 375 | WP_013188479.1 | Heat-labile enterotoxin B chain | VF |
| COG40_RS25440 () | 26599..27375 | - | 777 | WP_001378495.1 | Heat-labile enterotoxin A chain | VF |
| COG40_RS25450 () | 27691..27963 | + | 273 | WP_000019162.1 | hypothetical protein | - |
| COG40_RS25455 () | 27944..28435 | + | 492 | Protein_39 | IS91 family transposase ISSbo1 | Transposase |
| COG40_RS25460 () | 28585..28880 | + | 296 | Protein_40 | IS3 family transposase ISCARN101 | Transposase |
| COG40_RS25465 () | 28985..29724 | + | 740 | Protein_41 | IS3 family transposase IS629 | Transposase |
| COG40_RS25475 () | 30397..31905 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| COG40_RS25480 () | 31995..32468 | + | 474 | Protein_43 | IS3 family transposase IS629 | Transposase |
| COG40_RS25485 () | 32512..33378 | - | 867 | Protein_44 | IS110 family transposase ISEc45 | Transposase |
| COG40_RS25490 () | 33439..33633 | + | 195 | Protein_45 | transposase domain-containing protein | - |
| COG40_RS25495 () | 33899..34105 | - | 207 | Protein_46 | IS5 family transposase IS903B | Transposase |
| COG40_RS25500 () | 34256..34474 | - | 219 | WP_013188501.1 | Heat-stable enterotoxin A3/A4 | VF |
| COG40_RS25505 () | 34852..35271 | + | 420 | Protein_48 | IS3 family transposase ISBmu11 | Transposase |
| COG40_RS25510 () | 35464..35793 | + | 330 | WP_000471255.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| COG40_RS25515 () | 35774..36055 | + | 282 | WP_000780221.1 | helix-turn-helix transcriptional regulator | - |
| COG40_RS25525 () | 36378..37322 | + | 945 | WP_000710536.1 | hypothetical protein | - |
| COG40_RS25530 () | 37389..37739 | - | 351 | WP_001393279.1 | plasmid partitioning/stability family protein | - |
| COG40_RS25535 () | 37742..38704 | - | 963 | WP_000959870.1 | plasmid segregation protein ParM | - |
| COG40_RS25540 () | 38719..39067 | + | 349 | Protein_54 | hypothetical protein | - |
| COG40_RS25545 () | 39171..40187 | + | 1017 | WP_000219392.1 | IS110 family transposase ISShdy1 | Transposase |
| COG40_RS25550 () | 40303..41511 | + | 1209 | WP_000343720.1 | IS256 family transposase IS1414 | Transposase |
| COG40_RS25555 () | 41508..41681 | + | 174 | WP_044307862.1 | transposase domain-containing protein | - |
| COG40_RS25560 () | 41778..42005 | + | 228 | Protein_58 | IS21 family transposase | - |
| COG40_RS25565 () | 42074..42568 | - | 495 | WP_001203081.1 | DUF2919 family protein | - |
| COG40_RS25570 () | 42565..44478 | - | 1914 | WP_001393184.1 | UDP-glucose:protein N-beta-glucosyltransferase | VF |
| COG40_RS25575 () | 44550..44735 | - | 186 | WP_000894830.1 | hypothetical protein | - |
| COG40_RS25580 () | 44760..49310 | - | 4551 | WP_069985299.1 | Heme/hemopexin-binding protein | VF |
| COG40_RS25585 () | 49400..51211 | - | 1812 | WP_001393122.1 | Heme/hemopexin transporter protein HuxB | VF |
| COG40_RS25590 () | 51413..52021 | - | 609 | Protein_64 | IS3 family transposase IS2 | Transposase |
| COG40_RS25595 () | 52103..52468 | + | 366 | WP_000124092.1 | hypothetical protein | - |
| COG40_RS25600 () | 52468..53651 | + | 1184 | Protein_66 | IS91 family transposase ISEc37 | Transposase |
| COG40_RS25605 () | 53679..54842 | + | 1164 | Protein_67 | IS3 family transposase ISEc17 | Transposase |
| COG40_RS25610 () | 54895..55269 | + | 375 | Protein_68 | IS1 family transposase IS1N | Transposase |
| COG40_RS25615 () | 55341..56585 | - | 1245 | WP_001416764.1 | hypothetical protein | - |
| COG40_RS25620 () | 56854..58017 | - | 1164 | Protein_70 | IS3 family transposase ISEc17 | Transposase |
| COG40_RS25625 () | 58084..58329 | - | 246 | Protein_71 | IS256 family transposase IS1414 | Transposase |
| COG40_RS25630 () | 58491..58847 | - | 357 | WP_013188496.1 | hypothetical protein | - |
| COG40_RS25645 () | 60726..61888 | - | 1163 | Protein_74 | IS3 family transposase ISEc17 | Transposase |
| COG40_RS25650 () | 62070..62696 | - | 627 | WP_000593828.1 | ABC transporter ATP-binding protein | - |
| COG40_RS25655 () | 62689..63456 | - | 768 | WP_001394312.1 | hypothetical protein | - |
| COG40_RS25660 () | 63419..64621 | - | 1203 | WP_000836404.1 | TolC family protein | - |
| COG40_RS25665 () | 64618..65748 | - | 1131 | WP_001394310.1 | hypothetical protein | - |
| COG40_RS25670 () | 66307..67125 | - | 819 | Protein_79 | IS630 family transposase | - |
| COG40_RS25675 () | 67172..67537 | + | 366 | WP_000124138.1 | hypothetical protein | - |
| COG40_RS25680 () | 67537..68369 | + | 833 | Protein_81 | IS91 family transposase IS91 | Transposase |
| COG40_RS25690 () | 68643..69340 | + | 698 | Protein_82 | IS1 family transposase IS1G | Transposase |
| COG40_RS25695 () | 69463..69656 | - | 194 | Protein_83 | ANR family transcriptional regulator | - |
| COG40_RS25700 () | 69855..70652 | + | 798 | WP_000346363.1 | CFA/I fimbrial subunit D | VF |
| COG40_RS25705 () | 71021..71853 | - | 833 | Protein_85 | IS91 family transposase IS91 | Transposase |
| COG40_RS25710 () | 71853..72218 | - | 366 | WP_000124138.1 | hypothetical protein | - |
| COG40_RS25715 () | 72386..72640 | - | 255 | WP_001342360.1 | IS3 family transposase ISPa31 | Transposase |
| COG40_RS26365 () | 73032..73538 | - | 507 | WP_013188494.1 | CS3 fimbrial subunit A | VF |
| COG40_RS25725 () | 73560..74048 | - | 489 | WP_001704935.1 | hypothetical protein | - |
| COG40_RS25730 () | 74168..76621 | - | 2454 | WP_001391303.1 | F1 capsule-anchoring protein | VF |
| COG40_RS25735 () | 76587..77312 | - | 726 | WP_001391304.1 | Chaperone protein caf1M | VF |
| COG40_RS25740 () | 77791..78043 | - | 253 | Protein_92 | integrase core domain-containing protein | - |
| COG40_RS25745 () | 78170..78967 | - | 798 | WP_000544814.1 | IS21 family transposase IS21 | Transposase |
| COG40_RS25750 () | 78967..80132 | - | 1166 | Protein_94 | IS21 family transposase IS21 | Transposase |
| COG40_RS25755 () | 80214..80390 | - | 177 | Protein_95 | transposase domain-containing protein | - |
| COG40_RS25760 () | 80451..81580 | + | 1130 | Protein_96 | IS110 family transposase ISEc45 | Transposase |
| COG40_RS25765 () | 81833..83063 | - | 1231 | Protein_97 | IS66 family transposase | - |
| COG40_RS25770 () | 83273..83581 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| COG40_RS25775 () | 83668..84312 | - | 645 | WP_001144037.1 | ParA family protein | - |
| COG40_RS25780 () | 84490..85296 | - | 807 | WP_000016960.1 | site-specific integrase | - |
| COG40_RS25785 () | 85297..85602 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| COG40_RS25790 () | 85604..85822 | - | 219 | WP_000829078.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| COG40_RS25805 () | 86344..86601 | + | 258 | WP_000343095.1 | hypothetical protein | - |
| COG40_RS25810 () | 86601..87143 | + | 543 | WP_000194544.1 | hypothetical protein | - |
| COG40_RS25815 () | 87387..88229 | + | 843 | WP_162749921.1 | polysaccharide deacetylase family protein | - |
| COG40_RS25820 () | 88232..89320 | + | 1089 | WP_099590715.1 | putative hexosyltransferase CapU | - |
| COG40_RS25825 () | 89325..90275 | + | 951 | WP_001398306.1 | virulence factor VirK | - |
| COG40_RS25830 () | 90340..91283 | + | 944 | Protein_108 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| COG40_RS25835 () | 91345..91590 | - | 246 | Protein_109 | IS630 family transposase ISEc33 | Transposase |
| COG40_RS25840 () | 91672..92858 | + | 1187 | Protein_110 | IS3 family transposase ISKpn38 | Transposase |
| COG40_RS25845 () | 92920..93087 | - | 168 | Protein_111 | IS91 family transposase ISSbo1 | Transposase |
| COG40_RS25850 () | 93135..94673 | - | 1539 | WP_000998103.1 | IS66 family transposase ISEc8 | Transposase |
| COG40_RS25855 () | 94723..95070 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| COG40_RS25860 () | 95067..95456 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| COG40_RS25865 () | 95739..96901 | + | 1163 | WP_095033723.1 | IS3 family transposase IS3 | Transposase |
| COG40_RS25870 () | 97156..97347 | - | 192 | WP_122994480.1 | ANR family transcriptional regulator | - |
| COG40_RS25880 () | 97533..98767 | + | 1235 | WP_164968891.1 | IS3 family transposase IS2 | Transposase |
| COG40_RS25885 () | 98933..99627 | + | 695 | WP_085950855.1 | IS1 family transposase IS1N | Transposase |
| COG40_RS26155 () | 99716..99943 | - | 228 | WP_157774480.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|