MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 145089 bp
Accession: NZ_CP024274 Location: 1..145089 Organism: Escherichia coli strain F9792 Replicon: plasmid unnamed
Accession: NZ_CP024274 Location: 1..145089 Organism: Escherichia coli strain F9792 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5T63_RS24925 () | 382..579 | + | 198 | Protein_1 | IS3 family transposase IS2 | Transposase |
| A5T63_RS24930 () | 668..898 | + | 231 | WP_099490941.1 | transposase | - |
| A5T63_RS24935 () | 810..1475 | + | 666 | Protein_3 | IS66 family transposase ISEc43 | Transposase |
| A5T63_RS26375 () | 1617..2982 | - | 1366 | Protein_4 | IS66 family transposase ISCro1 | Transposase |
| A5T63_RS24945 () | 2984..3882 | - | 899 | Protein_5 | IS3 family transposase ISEc48 | Transposase |
| A5T63_RS24955 () | 4156..4512 | - | 357 | WP_071600075.1 | Protein CexE | VF |
| A5T63_RS24970 () | 5006..5302 | + | 297 | WP_001717536.1 | hypothetical protein | - |
| A5T63_RS24975 () | 5302..5870 | + | 569 | Protein_8 | IS91 family transposase IS91 | Transposase |
| A5T63_RS24980 () | 6055..6817 | + | 763 | Protein_9 | IS21 family transposase ISSso4 | Transposase |
| A5T63_RS24985 () | 6847..8439 | - | 1593 | WP_099490891.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS24990 () | 8470..8820 | - | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| A5T63_RS24995 () | 8817..9242 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS25000 () | 9440..10450 | - | 1011 | Protein_13 | IS66 family transposase ISEc43 | Transposase |
| A5T63_RS25005 () | 10505..11614 | + | 1110 | Protein_14 | IS4 family transposase IS186B | Transposase |
| A5T63_RS25010 () | 11785..12399 | - | 615 | Protein_15 | IS66 family transposase ISEc47 | Transposase |
| A5T63_RS25015 () | 12430..12780 | - | 351 | WP_024171399.1 | IS66 family transposase ISEc47 | Transposase |
| A5T63_RS25020 () | 12777..13211 | - | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| A5T63_RS25025 () | 13226..13681 | - | 456 | WP_157757766.1 | IS3 family transposase ISEcB1 | Transposase |
| A5T63_RS25030 () | 13741..14243 | - | 503 | Protein_19 | IS3 family transposase ISBope1 | Transposase |
| A5T63_RS25035 () | 14367..14516 | - | 150 | Protein_20 | IS3 family transposase ISKpn37 | Transposase |
| A5T63_RS25040 () | 15024..15242 | + | 219 | WP_001595189.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| A5T63_RS25050 () | 15536..15952 | + | 417 | Protein_22 | IS66 family transposase ISCro1 | Transposase |
| A5T63_RS25060 () | 16062..16358 | - | 297 | Protein_23 | IS21 family transposase | - |
| A5T63_RS25065 () | 16444..16869 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS25070 () | 16866..17216 | + | 351 | WP_000624718.1 | IS66 family transposase ISEc47 | Transposase |
| A5T63_RS25075 () | 17247..18839 | + | 1593 | WP_099490891.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS26380 () | 19087..19242 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| A5T63_RS25085 () | 19323..20474 | - | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| A5T63_RS25090 () | 20539..20799 | - | 261 | Protein_29 | IS3 family transposase ISSfl10 | Transposase |
| A5T63_RS25095 () | 20861..23698 | + | 2838 | Protein_30 | Multifunctional conjugation protein TraI | Relaxase |
| A5T63_RS25100 () | 23716..24262 | + | 547 | Protein_31 | DUF2726 domain-containing protein | - |
| A5T63_RS25105 () | 24259..24990 | + | 732 | WP_001717613.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| A5T63_RS25110 () | 25214..25396 | - | 183 | WP_001393357.1 | hypothetical protein | - |
| - () | 25640..25696 | - | 57 | NuclAT_1 | - | - |
| - () | 25640..25696 | - | 57 | NuclAT_1 | - | - |
| - () | 25640..25696 | - | 57 | NuclAT_1 | - | - |
| - () | 25640..25696 | - | 57 | NuclAT_1 | - | - |
| A5T63_RS25120 () | 25688..25894 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | - |
| A5T63_RS25125 () | 26178..26438 | + | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| A5T63_RS25135 () | 26664..26738 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| A5T63_RS25140 () | 26731..27588 | + | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| A5T63_RS25155 () | 28451..28852 | - | 402 | Protein_38 | IS91 family transposase | - |
| A5T63_RS25160 () | 28853..29499 | + | 647 | Protein_39 | IS630 family transposase | - |
| A5T63_RS25165 () | 30058..31188 | + | 1131 | WP_001718764.1 | ABC transporter permease | - |
| A5T63_RS25170 () | 31185..32387 | + | 1203 | WP_001595205.1 | TolC family protein | - |
| A5T63_RS25175 () | 32344..33117 | + | 774 | WP_050437394.1 | hypothetical protein | - |
| A5T63_RS25180 () | 33110..33736 | + | 627 | WP_001595210.1 | ABC transporter ATP-binding protein | - |
| A5T63_RS25185 () | 33917..35005 | + | 1089 | Protein_44 | IS3 family transposase | - |
| A5T63_RS25190 () | 35303..36490 | - | 1188 | WP_024191434.1 | peptide antibiotic transporter SbmA | - |
| A5T63_RS26210 () | 36901..37113 | - | 213 | WP_148717951.1 | hypothetical protein | - |
| A5T63_RS26215 () | 37106..37270 | + | 165 | Protein_47 | IS91 family transposase | - |
| A5T63_RS25200 () | 37279..40326 | - | 3048 | WP_001717496.1 | Tn3 family transposase ISPsy42 | Transposase |
| A5T63_RS25205 () | 40476..41054 | + | 579 | WP_001400936.1 | Tn3 family transposase ISPsy39 | Transposase |
| A5T63_RS25210 () | 41047..41319 | + | 273 | WP_000566440.1 | hypothetical protein | - |
| A5T63_RS25215 () | 41362..42077 | + | 716 | Protein_51 | IS91 family transposase ISEc37 | Transposase |
| A5T63_RS26220 () | 42445..42618 | + | 174 | WP_001717498.1 | hypothetical protein | - |
| A5T63_RS25225 () | 42837..43061 | + | 225 | Protein_53 | IS66 family transposase ISEc43 | Transposase |
| A5T63_RS25230 () | 43216..43680 | + | 465 | WP_024171410.1 | CS6 fimbrial subunit A | VF |
| A5T63_RS25235 () | 43698..44201 | + | 504 | WP_001595140.1 | CS6 fimbrial subunit CssB | - |
| A5T63_RS25240 () | 44250..44948 | + | 699 | WP_001595139.1 | Chaperone protein caf1M | VF |
| A5T63_RS25245 () | 44905..47340 | + | 2436 | WP_157757767.1 | CS6 fimbrial usher CssD | - |
| A5T63_RS25250 () | 47354..47916 | - | 563 | Protein_58 | IS1 family transposase | - |
| A5T63_RS25255 () | 48105..49282 | - | 1178 | Protein_59 | IS91 family transposase ISEc37 | Transposase |
| A5T63_RS25260 () | 49282..49578 | - | 297 | WP_000766063.1 | hypothetical protein | - |
| A5T63_RS25270 () | 49792..52760 | - | 2969 | Protein_61 | Tn3 family transposase TnpA_TnShfr1 | Transposase |
| A5T63_RS25275 () | 52763..53323 | - | 561 | WP_001595151.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| A5T63_RS25280 () | 53603..53725 | - | 123 | Protein_63 | IS1 family transposase | - |
| A5T63_RS25285 () | 53995..54664 | + | 670 | Protein_64 | AAA family ATPase | - |
| A5T63_RS25290 () | 54718..55347 | + | 630 | WP_001717585.1 | hypothetical protein | - |
| A5T63_RS25295 () | 55477..56997 | + | 1521 | Protein_66 | DUF4158 domain-containing protein | - |
| A5T63_RS25300 () | 56993..57229 | + | 237 | Protein_67 | IS91 family transposase ISEc37 | Transposase |
| A5T63_RS25305 () | 57597..58394 | - | 798 | WP_001595134.1 | CFA/I fimbrial subunit D | VF |
| A5T63_RS25310 () | 58592..58789 | + | 198 | WP_001413878.1 | ANR family transcriptional regulator | - |
| A5T63_RS25315 () | 59105..59272 | - | 168 | Protein_70 | IS91 family transposase ISEc37 | Transposase |
| A5T63_RS25320 () | 59304..59579 | - | 276 | Protein_71 | incFII family plasmid replication initiator RepA | - |
| A5T63_RS25325 () | 59848..60960 | - | 1113 | WP_099490844.1 | IS4 family transposase IS421 | Transposase |
| A5T63_RS25330 () | 61004..61414 | - | 411 | Protein_73 | IS3 family transposase ISSfl10 | Transposase |
| A5T63_RS25335 () | 61508..61888 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| A5T63_RS25340 () | 61885..62232 | + | 348 | WP_001595131.1 | IS66 family transposase ISEc8 | Transposase |
| A5T63_RS25345 () | 62282..62689 | + | 408 | Protein_76 | ISL3 family transposase ISEc38 | Transposase |
| A5T63_RS25350 () | 62694..63647 | - | 954 | Protein_77 | ISL3 family transposase ISEc38 | Transposase |
| A5T63_RS25355 () | 63950..64372 | + | 423 | WP_001595126.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A5T63_RS25360 () | 64372..65646 | + | 1275 | WP_001595125.1 | Y-family DNA polymerase | - |
| A5T63_RS26385 () | 65685..66008 | - | 324 | WP_000143877.1 | hypothetical protein | - |
| A5T63_RS25370 () | 66005..66418 | - | 414 | WP_032159708.1 | hypothetical protein | - |
| A5T63_RS25375 () | 66442..67473 | - | 1032 | WP_001595123.1 | ParB/RepB/Spo0J family partition protein | - |
| A5T63_RS25380 () | 67473..68339 | - | 867 | WP_001595122.1 | AAA family ATPase | - |
| A5T63_RS25385 () | 68893..69144 | + | 252 | WP_001595120.1 | hypothetical protein | Antitoxin Detail |
| A5T63_RS25390 () | 69141..69467 | + | 327 | WP_001595119.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A5T63_RS25395 () | 69571..69867 | + | 297 | WP_000766063.1 | hypothetical protein | - |
| A5T63_RS25400 () | 69867..71044 | + | 1178 | Protein_87 | IS91 family transposase ISEc37 | Transposase |
| A5T63_RS25415 () | 71917..72894 | + | 978 | WP_023486339.1 | RepB family plasmid replication initiator protein | - |
| A5T63_RS25420 () | 73252..74773 | - | 1522 | Protein_89 | IS3 family transposase | - |
| A5T63_RS25425 () | 74863..75603 | - | 741 | WP_001717448.1 | site-specific integrase | - |
| A5T63_RS25430 () | 75724..75852 | - | 129 | Protein_91 | transcriptional regulator | - |
| A5T63_RS25435 () | 76341..76640 | + | 300 | WP_024171395.1 | Major pilu subunit operon regulatory protein PapB | VF |
| A5T63_RS25440 () | 76915..77757 | + | 843 | WP_001595107.1 | helix-turn-helix domain-containing protein | - |
| A5T63_RS25445 () | 77765..78208 | + | 444 | WP_001595106.1 | hypothetical protein | VF |
| A5T63_RS25450 () | 78512..79222 | + | 711 | WP_149007421.1 | Toxin coregulated pilin | VF |
| A5T63_RS25455 () | 79283..80851 | + | 1569 | WP_024171394.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| A5T63_RS25460 () | 80870..81289 | + | 420 | WP_024171393.1 | hypothetical protein | VF |
| A5T63_RS25465 () | 81306..82762 | + | 1457 | Protein_98 | type II and III secretion system protein | - |
| A5T63_RS25470 () | 82765..83325 | + | 561 | WP_001595100.1 | hypothetical protein | - |
| A5T63_RS25475 () | 83327..84154 | + | 828 | WP_001595099.1 | hypothetical protein | - |
| A5T63_RS25480 () | 84142..84630 | + | 489 | WP_001595098.1 | hypothetical protein | - |
| A5T63_RS25485 () | 84828..86159 | + | 1332 | WP_024171392.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| A5T63_RS25490 () | 86146..87171 | + | 1026 | WP_001595096.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A5T63_RS25495 () | 87186..88250 | + | 1065 | WP_001595094.1 | hypothetical protein | - |
| A5T63_RS25500 () | 88256..89080 | + | 825 | WP_001595093.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| A5T63_RS25505 () | 89439..89660 | - | 222 | Protein_106 | IS91 family transposase ISEc37 | Transposase |
| A5T63_RS25510 () | 89654..90019 | - | 366 | Protein_107 | transposase | - |
| A5T63_RS25515 () | 90240..91001 | - | 762 | WP_179149066.1 | proQ/FINO family protein | - |
| A5T63_RS25525 () | 91535..91747 | - | 213 | WP_001717486.1 | hypothetical protein | - |
| A5T63_RS25530 () | 91864..92040 | + | 177 | Protein_110 | IS21 family transposase IS21 | Transposase |
| A5T63_RS25535 () | 92101..92418 | + | 318 | Protein_111 | ISL3 family transposase ISEc38 | Transposase |
| A5T63_RS25545 () | 94075..95596 | + | 1522 | Protein_112 | IS3 family transposase | - |
| A5T63_RS25550 () | 95628..96779 | - | 1152 | WP_001702847.1 | IS30 family transposase IS30D | Transposase |
| A5T63_RS25555 () | 96933..97298 | + | 366 | Protein_114 | IS1 family transposase IS1N | Transposase |
| A5T63_RS26225 () | 97777..97878 | - | 102 | Protein_115 | transposase | - |
| A5T63_RS25570 () | 98361..98636 | + | 276 | WP_001595082.1 | Major pilu subunit operon regulatory protein PapB | VF |
| A5T63_RS25575 () | 98729..99247 | + | 519 | WP_001595081.1 | hypothetical protein | VF |
| A5T63_RS25580 () | 99257..101656 | + | 2400 | WP_023486680.1 | Outer membrane usher protein YraJ | VF |
| A5T63_RS25585 () | 101700..102383 | + | 684 | WP_050437387.1 | Chaperone protein FaeE | VF |
| A5T63_RS25590 () | 102425..102928 | + | 504 | WP_001595078.1 | hypothetical protein | VF |
| A5T63_RS25595 () | 103073..103840 | + | 768 | WP_024171421.1 | hypothetical protein | VF |
| A5T63_RS25600 () | 103857..104621 | + | 765 | WP_001595075.1 | hypothetical protein | VF |
| A5T63_RS25605 () | 104632..105375 | + | 744 | WP_001595074.1 | hypothetical protein | - |
| A5T63_RS25610 () | 105513..105812 | + | 300 | WP_032201317.1 | Major pilu subunit operon regulatory protein PapB | VF |
| A5T63_RS25615 () | 105961..106791 | + | 831 | WP_001595073.1 | K88 fimbrial protein AC | VF |
| A5T63_RS25620 () | 106811..107683 | + | 873 | WP_001595072.1 | K88 fimbrial protein AB | VF |
| A5T63_RS25625 () | 107975..108418 | - | 444 | Protein_127 | IS1 family transposase IS1N | Transposase |
| A5T63_RS25630 () | 108464..108748 | - | 285 | Protein_128 | IS3 family transposase ISEcB1 | Transposase |
| A5T63_RS25635 () | 108797..109003 | - | 207 | Protein_129 | tyrosine-type recombinase/integrase | - |
| A5T63_RS25640 () | 109098..109511 | - | 414 | WP_001595064.1 | hypothetical protein | - |
| A5T63_RS25645 () | 109988..110245 | + | 258 | WP_001595062.1 | hypothetical protein | - |
| A5T63_RS25650 () | 110245..110787 | + | 543 | WP_032201505.1 | hypothetical protein | - |
| A5T63_RS25660 () | 111030..111872 | + | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| A5T63_RS25665 () | 111875..112963 | + | 1089 | WP_024171602.1 | putative hexosyltransferase CapU | - |
| A5T63_RS25670 () | 112968..113918 | + | 951 | WP_023486370.1 | virulence factor VirK | - |
| A5T63_RS25675 () | 114015..114440 | + | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| A5T63_RS25680 () | 114437..114787 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS25685 () | 114818..116431 | + | 1614 | WP_099492829.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS25690 () | 116462..116773 | + | 312 | Protein_139 | IS21 family transposase IS100kyp | Transposase |
| A5T63_RS25695 () | 116770..117552 | + | 783 | Protein_140 | IS21 family transposase IS100kyp | Transposase |
| A5T63_RS25705 () | 117617..118444 | + | 828 | Protein_141 | IS66 family transposase ISEc8 | Transposase |
| A5T63_RS25710 () | 118517..119726 | + | 1210 | Protein_142 | IS256 family transposase IS1414 | Transposase |
| A5T63_RS26230 () | 119762..119863 | + | 102 | Protein_143 | transposase domain-containing protein | - |
| A5T63_RS25715 () | 119902..120762 | + | 861 | Protein_144 | IS91 family transposase ISSbo1 | Transposase |
| A5T63_RS25720 () | 120952..121164 | + | 213 | Protein_145 | helix-turn-helix domain-containing protein | - |
| A5T63_RS25725 () | 121169..121408 | + | 240 | Protein_146 | IS21 family transposase | - |
| A5T63_RS25730 () | 121425..122180 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| A5T63_RS25740 () | 122273..122425 | + | 153 | Protein_148 | IS3 family transposase | - |
| A5T63_RS25745 () | 122471..122590 | + | 120 | Protein_149 | IS200/IS605 family transposase | - |
| A5T63_RS25750 () | 122983..123171 | + | 189 | WP_001595165.1 | hypothetical protein | - |
| A5T63_RS25755 () | 123319..124530 | + | 1212 | WP_001717882.1 | biotin/lipoyl-binding protein | - |
| A5T63_RS25760 () | 124527..126623 | + | 2097 | WP_001717881.1 | ATP-binding cassette domain-containing protein | - |
| A5T63_RS26235 () | 126957..127517 | + | 561 | WP_157757764.1 | hypothetical protein | - |
| A5T63_RS25770 () | 127657..128076 | + | 420 | WP_001595160.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS25775 () | 128073..128423 | + | 351 | WP_001464094.1 | IS66 family transposase IS682 | Transposase |
| A5T63_RS25780 () | 128454..129421 | + | 968 | Protein_156 | IS66 family transposase ISEc47 | Transposase |
| A5T63_RS25785 () | 129453..129887 | + | 435 | WP_001595158.1 | DUF1380 family protein | - |
| A5T63_RS25790 () | 129932..130495 | + | 564 | Protein_158 | hypothetical protein | - |
| A5T63_RS25795 () | 130526..132139 | - | 1614 | WP_099492829.1 | IS66 family transposase ISEc23 | Transposase |
| A5T63_RS25800 () | 132170..132520 | - | 351 | WP_001404526.1 | IS66 family transposase ISEc47 | Transposase |
| A5T63_RS25805 () | 132517..132942 | - | 426 | WP_000436083.1 | IS66 family transposase IS682 | Transposase |
| A5T63_RS25810 () | 133038..133214 | + | 177 | Protein_162 | antirestriction protein | - |
| A5T63_RS26390 () | 133201..133433 | - | 233 | Protein_163 | hypothetical protein | - |
| A5T63_RS25825 () | 134113..134343 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| A5T63_RS25830 () | 134395..135756 | + | 1362 | WP_032201446.1 | DUF3560 domain-containing protein | - |
| A5T63_RS25835 () | 135802..136365 | + | 564 | WP_032201448.1 | class I SAM-dependent methyltransferase | - |
| A5T63_RS25855 () | 137218..137739 | + | 522 | WP_032201449.1 | single-stranded DNA-binding protein | - |
| A5T63_RS25860 () | 137796..138029 | + | 234 | WP_001297827.1 | DUF905 domain-containing protein | - |
| A5T63_RS25865 () | 138090..140057 | + | 1968 | WP_032201451.1 | ParB/RepB/Spo0J family partition protein | - |
| A5T63_RS25870 () | 140112..140546 | + | 435 | WP_001719370.1 | conjugation system SOS inhibitor PsiB | - |
| A5T63_RS25875 () | 140543..141217 | + | 675 | WP_001719371.1 | plasmid SOS inhibition protein A | - |
| A5T63_RS25880 () | 141214..141528 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 141485..141631 | + | 147 | NuclAT_0 | - | - |
| - () | 141485..141631 | + | 147 | NuclAT_0 | - | - |
| - () | 141485..141631 | + | 147 | NuclAT_0 | - | - |
| - () | 141485..141631 | + | 147 | NuclAT_0 | - | - |
| A5T63_RS25885 () | 141730..142222 | - | 493 | Protein_173 | IS3 family transposase IS1203 | Transposase |
| A5T63_RS25890 () | 142430..143674 | + | 1245 | WP_024171601.1 | hypothetical protein | - |
| A5T63_RS26395 () | 144044..144193 | + | 150 | WP_001424616.1 | hypothetical protein | - |
| A5T63_RS25895 () | 144389..144528 | - | 140 | Protein_176 | IS91 family transposase IS91 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|