MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35769 bp
Accession: NZ_CP024270 Location: 1..35769 Organism: Escherichia coli strain F8111-1SC3 Replicon: plasmid unnamed1
Accession: NZ_CP024270 Location: 1..35769 Organism: Escherichia coli strain F8111-1SC3 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCV27_RS24840 () | 1..394 | - | 394 | WP_099492797.1 | DUF1380 family protein | - |
| CCV27_RS24845 () | 408..629 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| CCV27_RS24850 () | 630..1315 | - | 686 | Protein_2 | DNA methylase | - |
| CCV27_RS24855 () | 1391..1702 | - | 312 | WP_033863049.1 | hypothetical protein | - |
| CCV27_RS24860 () | 1706..2128 | - | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| CCV27_RS24865 () | 2131..3111 | - | 981 | WP_012783921.1 | plasmid segregation protein ParM | - |
| CCV27_RS24870 () | 3449..3784 | + | 336 | WP_001340323.1 | hypothetical protein | - |
| CCV27_RS27285 () | 3879..4180 | - | 302 | Protein_7 | hypothetical protein | - |
| CCV27_RS27290 () | 4173..4780 | - | 608 | Protein_8 | DUF1281 domain-containing protein | - |
| CCV27_RS24885 () | 5198..5446 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CCV27_RS24890 () | 5443..5880 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CCV27_RS27060 () | 5880..7149 | + | 1270 | Protein_11 | Y-family DNA polymerase | - |
| CCV27_RS24900 () | 7361..7986 | + | 626 | Protein_12 | Chromosome-partitioning ATPase Soj | VF |
| CCV27_RS27295 () | 7983..8285 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| CCV27_RS24915 () | 8836..10181 | - | 1346 | Protein_14 | hypothetical protein | - |
| CCV27_RS24925 () | 10534..11135 | + | 602 | Protein_15 | proQ/FINO family protein | - |
| CCV27_RS24930 () | 11191..11700 | + | 510 | WP_032291091.1 | hypothetical protein | - |
| CCV27_RS24935 () | 12171..13029 | - | 859 | Protein_17 | Beta-lactamase TEM | ARG |
| CCV27_RS24940 () | 13212..13769 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CCV27_RS24945 () | 13933..16938 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CCV27_RS24950 () | 16963..17817 | - | 855 | WP_080060530.1 | 3'-5' exonuclease | - |
| CCV27_RS24955 () | 17857..18138 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCV27_RS24960 () | 18135..18404 | - | 270 | WP_032291093.1 | hypothetical protein | Antitoxin Detail |
| CCV27_RS27300 () | 18459..18617 | - | 159 | WP_038349023.1 | hypothetical protein | - |
| CCV27_RS24975 () | 19315..20346 | - | 1032 | WP_052991836.1 | replication initiation protein | - |
| CCV27_RS24990 () | 21320..21583 | + | 264 | WP_001387472.1 | ash family protein | - |
| CCV27_RS24995 () | 21501..21788 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| CCV27_RS25005 () | 22230..22763 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CCV27_RS25015 () | 23017..23700 | + | 684 | WP_001377964.1 | hypothetical protein | - |
| CCV27_RS25020 () | 23872..24126 | + | 255 | WP_001492938.1 | PilI type IV pilus biogenesis protein | - |
| CCV27_RS25030 () | 24387..24653 | + | 267 | WP_023143690.1 | hypothetical protein | - |
| CCV27_RS25040 () | 25329..26396 | + | 1068 | WP_032321486.1 | hypothetical protein | VF |
| CCV27_RS25045 () | 26396..26833 | + | 438 | WP_000539811.1 | hypothetical protein | VF |
| CCV27_RS25050 () | 26847..28529 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| CCV27_RS25055 () | 28522..29817 | + | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| CCV27_RS25060 () | 29804..30256 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| CCV27_RS25065 () | 30267..31820 | + | 1554 | WP_063118132.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CCV27_RS25070 () | 31833..32918 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CCV27_RS25075 () | 32935..33549 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| CCV27_RS25080 () | 33559..34119 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| CCV27_RS25085 () | 34104..34759 | + | 656 | Protein_40 | prepilin peptidase | - |
| CCV27_RS25090 () | 34747..35769 | + | 1023 | WP_198406484.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|