MGE detailed information
MGE type: Genomic_island MGE length: 20370 bp
Accession: NZ_CP024269 Location: 3737800..3758169 Organism: Escherichia coli strain F8111-1SC3 Replicon: chromosome
Accession: NZ_CP024269 Location: 3737800..3758169 Organism: Escherichia coli strain F8111-1SC3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCV27_RS18770 () | 3733885..3734685 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CCV27_RS18775 () | 3734763..3735533 | + | 771 | WP_001612389.1 | class I SAM-dependent methyltransferase | - |
| CCV27_RS18780 () | 3735581..3736939 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| CCV27_RS18785 () | 3737011..3737766 | - | 756 | WP_001612392.1 | hydroxyacylglutathione hydrolase | - |
| CCV27_RS18790 () | 3737800..3738522 | + | 723 | WP_001612393.1 | class I SAM-dependent methyltransferase | - |
| CCV27_RS18795 () | 3738519..3738986 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| CCV27_RS18800 () | 3739051..3739782 | + | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| CCV27_RS18815 () | 3740319..3741119 | + | 801 | WP_001612394.1 | hypothetical protein | - |
| CCV27_RS27220 () | 3741245..3741454 | - | 210 | WP_001414017.1 | hypothetical protein | - |
| CCV27_RS18825 () | 3741598..3742047 | - | 450 | WP_001302684.1 | DUF1311 domain-containing protein | - |
| CCV27_RS18830 () | 3742050..3742946 | - | 897 | WP_000002703.1 | hypothetical protein | - |
| CCV27_RS18840 () | 3742967..3743446 | - | 480 | WP_001284959.1 | hypothetical protein | VF |
| CCV27_RS18845 () | 3743473..3744822 | - | 1350 | WP_001087747.1 | hypothetical protein | VF |
| CCV27_RS18850 () | 3744833..3746134 | - | 1302 | Protein_3464 | hypothetical protein | VF |
| CCV27_RS18855 () | 3746136..3747002 | + | 867 | Protein_3465 | hypothetical protein | VF |
| CCV27_RS18860 () | 3747002..3747379 | + | 378 | WP_001077738.1 | hypothetical protein | - |
| CCV27_RS18865 () | 3747848..3748984 | + | 1137 | WP_059321394.1 | ISAs1 family transposase ISEc1 | Transposase |
| CCV27_RS18870 () | 3749030..3749404 | + | 375 | Protein_3468 | ISAs1 family transposase ISEc1 | Transposase |
| CCV27_RS18875 () | 3749458..3750225 | - | 768 | WP_001118037.1 | 2-oxoglutaramate amidase | - |
| CCV27_RS18880 () | 3750406..3750852 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| CCV27_RS18885 () | 3750895..3753339 | - | 2445 | WP_001612411.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| CCV27_RS18890 () | 3753579..3754157 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| CCV27_RS18895 () | 3754363..3755129 | + | 767 | Protein_3473 | class II glutamine amidotransferase | - |
| CCV27_RS18900 () | 3755100..3755840 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| CCV27_RS18905 () | 3755996..3756274 | - | 279 | WP_024171431.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| CCV27_RS18910 () | 3756277..3756537 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| CCV27_RS18915 () | 3756747..3757496 | + | 750 | Protein_3477 | C40 family peptidase | - |
| CCV27_RS18920 () | 3757672..3758169 | + | 498 | WP_001612413.1 | REP-associated tyrosine transposase RayT | - |
| CCV27_RS18925 () | 3758356..3760068 | - | 1713 | Protein_3479 | flagellar biosynthesis protein FlhA | - |
| CCV27_RS18930 () | 3760040..3760825 | + | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| CCV27_RS18935 () | 3760896..3761951 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| CCV27_RS18940 () | 3761948..3762400 | + | 453 | WP_001717709.1 | GNAT family N-acetyltransferase | - |
| CCV27_RS18945 () | 3762718..3762921 | + | 204 | Protein_3483 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|