MGE detailed information
MGE type: Genomic_island MGE length: 53450 bp
Accession: NZ_CP024269 Location: 2628897..2682346 Organism: Escherichia coli strain F8111-1SC3 Replicon: chromosome
Accession: NZ_CP024269 Location: 2628897..2682346 Organism: Escherichia coli strain F8111-1SC3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCV27_RS13410 () | 2625204..2626586 | - | 1383 | WP_032201246.1 | glycoside-pentoside-hexuronide family transporter | - |
| CCV27_RS13420 () | 2627272..2628462 | + | 1191 | WP_001218920.1 | tyrosine-type recombinase/integrase | - |
| CCV27_RS13425 () | 2628897..2629940 | + | 1044 | WP_000999866.1 | hypothetical protein | - |
| CCV27_RS13430 () | 2630082..2631755 | - | 1674 | WP_001490270.1 | phosphoethanolamine transferase | - |
| CCV27_RS13435 () | 2632134..2633867 | - | 1734 | WP_000434627.1 | dynamin family protein | - |
| CCV27_RS13440 () | 2633839..2635554 | - | 1716 | WP_001379612.1 | hypothetical protein | - |
| CCV27_RS13445 () | 2635565..2636182 | - | 618 | WP_001440124.1 | hypothetical protein | - |
| CCV27_RS13450 () | 2636535..2637281 | - | 747 | WP_001486234.1 | porin family protein | - |
| CCV27_RS13455 () | 2637460..2637690 | + | 231 | WP_072258026.1 | integrase | - |
| CCV27_RS13460 () | 2638006..2638711 | + | 706 | Protein_2494 | DUF4365 domain-containing protein | - |
| CCV27_RS13465 () | 2639245..2640171 | - | 927 | WP_000256718.1 | hypothetical protein | - |
| CCV27_RS13470 () | 2640161..2641854 | - | 1694 | Protein_2496 | AAA family ATPase | - |
| CCV27_RS13475 () | 2641851..2643041 | - | 1191 | WP_001277856.1 | restriction endonuclease subunit S | - |
| CCV27_RS13480 () | 2643038..2644672 | - | 1635 | WP_000627733.1 | type I restriction-modification system subunit M | - |
| CCV27_RS13485 () | 2644736..2648149 | - | 3414 | WP_000438164.1 | DEAD/DEAH box helicase family protein | - |
| CCV27_RS13490 () | 2649424..2650047 | + | 624 | WP_000658303.1 | MmcB family DNA repair protein | - |
| CCV27_RS13495 () | 2650033..2651061 | - | 1029 | WP_000714421.1 | beta family protein | - |
| CCV27_RS13500 () | 2651065..2651607 | - | 543 | WP_000875105.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CCV27_RS13505 () | 2651608..2652066 | - | 459 | WP_001440133.1 | hypothetical protein | - |
| CCV27_RS13515 () | 2652694..2652972 | - | 279 | WP_001536430.1 | PerC family transcriptional regulator | - |
| CCV27_RS13525 () | 2653588..2653929 | - | 342 | Protein_2505 | hypothetical protein | VF |
| CCV27_RS13535 () | 2654436..2654627 | + | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| CCV27_RS13540 () | 2654680..2654913 | - | 234 | WP_000124171.1 | hypothetical protein | - |
| CCV27_RS13545 () | 2655010..2655633 | - | 624 | WP_001260379.1 | hypothetical protein | - |
| CCV27_RS26935 () | 2656152..2656379 | - | 228 | WP_155522400.1 | hypothetical protein | - |
| CCV27_RS13550 () | 2656704..2657180 | + | 477 | WP_000258199.1 | ProQ/FinO family protein | - |
| CCV27_RS13555 () | 2657182..2657730 | - | 549 | WP_001167448.1 | hypothetical protein | - |
| CCV27_RS13560 () | 2658003..2658233 | - | 231 | WP_000958491.1 | AlpA family transcriptional regulator | - |
| CCV27_RS13565 () | 2658302..2658874 | - | 573 | WP_001013349.1 | hypothetical protein | - |
| CCV27_RS13570 () | 2659258..2659989 | - | 732 | WP_001075477.1 | inovirus Gp2 family protein | - |
| CCV27_RS13575 () | 2661793..2662812 | + | 1020 | WP_000056316.1 | hypothetical protein | - |
| CCV27_RS13580 () | 2662833..2663027 | - | 195 | WP_001304548.1 | hypothetical protein | - |
| CCV27_RS13585 () | 2663021..2663904 | + | 884 | Protein_2517 | 50S ribosome-binding GTPase | - |
| CCV27_RS13590 () | 2664107..2664787 | + | 681 | WP_001282911.1 | WYL domain-containing protein | - |
| CCV27_RS13595 () | 2664938..2665615 | + | 678 | WP_001097567.1 | hypothetical protein | - |
| CCV27_RS13600 () | 2665621..2665854 | + | 234 | WP_001278284.1 | DUF905 family protein | - |
| CCV27_RS13605 () | 2665944..2666761 | + | 818 | Protein_2521 | DUF932 domain-containing protein | - |
| CCV27_RS13610 () | 2666853..2667338 | + | 486 | WP_000213721.1 | antirestriction protein | - |
| CCV27_RS13615 () | 2667354..2667830 | + | 477 | WP_001186201.1 | RadC family protein | - |
| CCV27_RS13620 () | 2667899..2668120 | + | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| CCV27_RS13625 () | 2668283..2668651 | + | 369 | WP_001285645.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CCV27_RS13630 () | 2668741..2669115 | + | 375 | WP_000854775.1 | TA system toxin CbtA family protein | Toxin Detail |
| CCV27_RS13635 () | 2669112..2669603 | + | 492 | WP_000976825.1 | hypothetical protein | - |
| CCV27_RS13640 () | 2669615..2669812 | + | 198 | WP_000772035.1 | DUF957 domain-containing protein | - |
| CCV27_RS13645 () | 2669897..2670739 | + | 843 | WP_001274548.1 | DUF4942 domain-containing protein | - |
| CCV27_RS13655 () | 2670977..2671141 | + | 165 | Protein_2530 | virulence RhuM family protein | - |
| CCV27_RS13660 () | 2671538..2672722 | + | 1185 | WP_001719114.1 | sugar efflux transporter | - |
| CCV27_RS13665 () | 2672833..2673756 | + | 924 | WP_000535959.1 | carboxylate/amino acid/amine transporter | - |
| CCV27_RS13670 () | 2673760..2674578 | - | 819 | WP_000779401.1 | Lipoprotein 28 | VF |
| CCV27_RS13675 () | 2674789..2675082 | + | 294 | WP_001306625.1 | hypothetical protein | - |
| CCV27_RS13680 () | 2675384..2675881 | + | 498 | WP_000443168.1 | Chaperone protein SicA | VF |
| CCV27_RS13685 () | 2675891..2676073 | + | 183 | WP_001719115.1 | hypothetical protein | - |
| CCV27_RS13690 () | 2676129..2677910 | + | 1782 | WP_001719116.1 | YopB/SseC family type III secretion system translocon subunit | - |
| CCV27_RS13695 () | 2677923..2679053 | + | 1131 | WP_001719117.1 | hypothetical protein | - |
| CCV27_RS13700 () | 2679097..2680446 | + | 1350 | WP_001719118.1 | Cell invasion protein SipD | VF |
| CCV27_RS13705 () | 2680649..2682346 | + | 1698 | WP_099492700.1 | Transcriptional regulator HilA | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|