MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34042 bp
Accession: NZ_CP024267 Location: 1..34042 Organism: Escherichia coli O6:H16 strain F6699 Replicon: plasmid unnamed1
Accession: NZ_CP024267 Location: 1..34042 Organism: Escherichia coli O6:H16 strain F6699 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG39_RS24110 (1) | 1..705 | - | 705 | Protein_0 | oligosaccharide MFS transporter | - |
| COG39_RS24115 (768) | 768..2894 | - | 2127 | WP_001735723.1 | alpha-galactosidase | - |
| COG39_RS24120 (2988) | 2988..3998 | - | 1011 | WP_001705419.1 | substrate-binding domain-containing protein | - |
| COG39_RS25705 (4120) | 4120..4292 | - | 173 | Protein_3 | IS3 family transposase | - |
| COG39_RS24125 (4426) | 4426..4611 | - | 186 | Protein_4 | type II toxin-antitoxin system toxin YacB | - |
| COG39_RS24130 (4611) | 4611..4790 | - | 180 | Protein_5 | type II toxin-antitoxin system antitoxin YacA | - |
| COG39_RS24135 (4870) | 4870..6409 | + | 1540 | Protein_6 | IS3 family transposase | - |
| COG39_RS24145 (6489) | 6489..7022 | + | 534 | Protein_7 | 3'-5' exonuclease | - |
| COG39_RS24150 (7068) | 7068..7850 | - | 783 | WP_249929228.1 | hypothetical protein | - |
| COG39_RS25710 (8007) | 8007..8102 | - | 96 | Protein_9 | hypothetical protein | - |
| COG39_RS25715 (8107) | 8107..8403 | - | 297 | WP_249929229.1 | hypothetical protein | - |
| COG39_RS24160 (8657) | 8657..9139 | + | 483 | WP_001751479.1 | IS66 family transposase ISEc23 | Transposase |
| COG39_RS24165 (9078) | 9078..9428 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| COG39_RS24170 (9459) | 9459..11072 | + | 1614 | Protein_13 | IS66-like element ISEc23 family transposase | - |
| COG39_RS24175 (11079) | 11079..12061 | + | 983 | Protein_14 | IS110 family transposase ISShdy1 | Transposase |
| COG39_RS24190 (13251) | 13251..13535 | + | 285 | WP_024169770.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| COG39_RS24195 (13535) | 13535..13810 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| COG39_RS24200 (13916) | 13916..14119 | + | 204 | Protein_17 | hypothetical protein | - |
| COG39_RS24205 (14649) | 14649..15215 | + | 567 | WP_134881237.1 | hypothetical protein | - |
| COG39_RS24210 (15565) | 15565..15924 | - | 360 | Protein_19 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| COG39_RS24220 (17336) | 17336..17732 | - | 397 | Protein_20 | plasmid partitioning/stability family protein | - |
| COG39_RS24225 (17732) | 17732..18691 | - | 960 | WP_000921959.1 | plasmid segregation protein ParM | - |
| COG39_RS24235 (19129) | 19129..20029 | + | 901 | Protein_22 | DUF1281 domain-containing protein | - |
| COG39_RS24240 (20033) | 20033..20338 | + | 306 | WP_064761155.1 | hypothetical protein | - |
| COG39_RS24245 (20413) | 20413..21096 | + | 684 | WP_000085890.1 | DNA methylase | - |
| COG39_RS24250 (21097) | 21097..21318 | + | 222 | WP_001734793.1 | hypothetical protein | - |
| COG39_RS24255 (21212) | 21212..21764 | + | 553 | Protein_26 | DUF1380 family protein | - |
| COG39_RS25720 (21810) | 21810..22585 | + | 776 | Protein_27 | hypothetical protein | - |
| COG39_RS24275 (22998) | 22998..23423 | + | 426 | WP_064198693.1 | antirestriction protein | - |
| COG39_RS24280 (23485) | 23485..23885 | + | 401 | Protein_29 | hypothetical protein | - |
| COG39_RS24285 (23882) | 23882..24073 | + | 192 | WP_001378617.1 | hypothetical protein | - |
| COG39_RS25725 (24429) | 24429..24579 | - | 151 | Protein_31 | hypothetical protein | - |
| COG39_RS24295 (25091) | 25091..25321 | + | 231 | WP_024169747.1 | hypothetical protein | - |
| COG39_RS24300 (25373) | 25373..26734 | + | 1362 | Protein_33 | DUF3560 domain-containing protein | - |
| COG39_RS24305 (26781) | 26781..27345 | + | 565 | Protein_34 | class I SAM-dependent methyltransferase | - |
| COG39_RS24310 (27430) | 27430..27913 | - | 484 | Protein_35 | hypothetical protein | - |
| COG39_RS24320 (28173) | 28173..28679 | + | 507 | WP_134881240.1 | single-stranded DNA-binding protein | - |
| COG39_RS24325 (28752) | 28752..28985 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| COG39_RS24330 (29046) | 29046..31010 | + | 1965 | WP_000117112.1 | ParB/RepB/Spo0J family partition protein | - |
| COG39_RS24335 (31065) | 31065..31499 | + | 435 | WP_000845924.1 | conjugation system SOS inhibitor PsiB | - |
| COG39_RS25195 (31496) | 31496..32214 | + | 719 | Protein_40 | plasmid SOS inhibition protein A | - |
| COG39_RS24355 (32211) | 32211..32484 | + | 274 | Protein_41 | theronine dehydrogenase | - |
| - (32493) | 32493..32692 | + | 200 | NuclAT_0 | - | - |
| - (32493) | 32493..32692 | + | 200 | NuclAT_0 | - | - |
| - (32493) | 32493..32692 | + | 200 | NuclAT_0 | - | - |
| - (32493) | 32493..32692 | + | 200 | NuclAT_0 | - | - |
| - (32493) | 32493..32692 | - | 200 | NuclAT_0 | - | - |
| COG39_RS24360 (32680) | 32680..32828 | + | 149 | Protein_42 | DUF5431 family protein | - |
| COG39_RS25730 (32776) | 32776..32898 | + | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| COG39_RS24365 (33072) | 33072..33317 | + | 246 | WP_249929230.1 | hypothetical protein | - |
| COG39_RS24375 (33776) | 33776..34042 | + | 267 | WP_134881242.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|