MGE detailed information
MGE type: Prophage MGE length: 46018 bp
Accession: NZ_CP024263 Location: 860389..906406 Organism: Escherichia coli O169:H41 strain F6326-C1 Replicon: chromosome
Accession: NZ_CP024263 Location: 860389..906406 Organism: Escherichia coli O169:H41 strain F6326-C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG38_RS27290 () | 856378..856425 | + | 48 | WP_211180494.1 | protein YnaN | - |
| COG38_RS04590 () | 856439..857422 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| COG38_RS04600 () | 857900..859273 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| COG38_RS04605 () | 859402..860337 | - | 936 | WP_001157377.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| COG38_RS04610 () | 860389..861624 | - | 1236 | WP_024171493.1 | IS91 family transposase ISTha3 | Transposase |
| COG38_RS04615 () | 861626..861841 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| COG38_RS04620 () | 861941..862129 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 861945..862123 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 861945..862123 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 861945..862123 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 861945..862123 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| COG38_RS04625 () | 862122..862316 | - | 195 | WP_072130784.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| COG38_RS04630 () | 862373..863206 | - | 834 | WP_000166322.1 | recombination protein RecT | - |
| COG38_RS04635 () | 863199..865874 | - | 2676 | WP_001718192.1 | exodeoxyribonuclease VIII | - |
| COG38_RS04640 () | 865973..866248 | - | 276 | WP_001594001.1 | phage protein | - |
| COG38_RS04645 () | 866323..866499 | - | 177 | WP_001594002.1 | phage protein | - |
| COG38_RS04650 () | 866493..866714 | - | 222 | WP_000560220.1 | killing protein KilR | - |
| COG38_RS04655 () | 867135..867287 | - | 153 | WP_001594003.1 | DUF1391 family protein | - |
| COG38_RS04670 () | 867720..868139 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| COG38_RS04675 () | 868219..868473 | + | 255 | WP_001072340.1 | hypothetical protein | - |
| COG38_RS04680 () | 868470..868892 | + | 423 | WP_001594005.1 | phage protein | - |
| COG38_RS04685 () | 868905..869201 | + | 297 | WP_001718193.1 | hypothetical protein | - |
| COG38_RS04690 () | 869202..869453 | - | 252 | WP_024171494.1 | hypothetical protein | - |
| COG38_RS26780 () | 869743..870651 | + | 909 | WP_001684845.1 | hypothetical protein | - |
| COG38_RS26785 () | 870563..871105 | + | 543 | WP_159383688.1 | replication protein | - |
| COG38_RS04705 () | 871135..871530 | + | 396 | WP_001353252.1 | DUF977 family protein | - |
| COG38_RS04710 () | 871527..871823 | + | 297 | WP_001353251.1 | DUF4406 domain-containing protein | - |
| COG38_RS04715 () | 871820..872104 | + | 285 | WP_001017772.1 | DUF4752 family protein | - |
| COG38_RS04720 () | 872204..872416 | + | 213 | WP_000935426.1 | hypothetical protein | - |
| COG38_RS04725 () | 872455..873009 | - | 555 | WP_001033793.1 | hypothetical protein | - |
| COG38_RS04730 () | 873006..873938 | - | 933 | WP_001718196.1 | hypothetical protein | - |
| COG38_RS04735 () | 874365..874520 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| COG38_RS04740 () | 874987..875586 | + | 600 | WP_001594015.1 | DUF1367 family protein | - |
| COG38_RS04745 () | 875586..875876 | + | 291 | WP_001594016.1 | DUF1364 domain-containing protein | - |
| COG38_RS04750 () | 875873..876415 | + | 543 | WP_001594017.1 | DUF1133 family protein | - |
| COG38_RS04765 () | 877498..877924 | + | 427 | Protein_870 | tellurite/colicin resistance protein | - |
| COG38_RS04770 () | 877921..878073 | + | 153 | WP_000833653.1 | DUF3927 family protein | - |
| COG38_RS04775 () | 878160..878552 | + | 393 | WP_001297664.1 | holin | - |
| COG38_RS04780 () | 878542..878817 | + | 276 | WP_000950577.1 | phage holin family protein | - |
| COG38_RS04785 () | 878820..879197 | + | 378 | WP_001718205.1 | M15 family metallopeptidase | - |
| COG38_RS04790 () | 879212..879394 | + | 183 | WP_001353217.1 | hypothetical protein | - |
| COG38_RS04795 () | 879799..880590 | + | 792 | WP_001291088.1 | ParB/Srx family N-terminal domain-containing protein | - |
| COG38_RS04800 () | 880583..881515 | + | 933 | WP_001204026.1 | hypothetical protein | - |
| COG38_RS04805 () | 881451..881702 | + | 252 | WP_001307172.1 | hypothetical protein | - |
| COG38_RS04810 () | 881706..882797 | + | 1092 | WP_000089436.1 | terminase small subunit | - |
| COG38_RS04815 () | 882787..884115 | + | 1329 | WP_000021156.1 | terminase | - |
| COG38_RS04820 () | 884134..885570 | + | 1437 | WP_001718207.1 | DUF1073 domain-containing protein | - |
| COG38_RS04825 () | 885515..886348 | + | 834 | WP_001018385.1 | hypothetical protein | - |
| COG38_RS04830 () | 886329..887651 | + | 1323 | WP_001718208.1 | DUF2213 domain-containing protein | - |
| COG38_RS04835 () | 887644..888261 | + | 618 | WP_001353212.1 | hypothetical protein | - |
| COG38_RS04840 () | 888276..889304 | + | 1029 | WP_001272372.1 | hypothetical protein | - |
| COG38_RS04845 () | 889362..889832 | + | 471 | WP_000780863.1 | hypothetical protein | - |
| COG38_RS04850 () | 889832..890272 | + | 441 | WP_000175375.1 | hypothetical protein | - |
| COG38_RS04855 () | 890269..890709 | + | 441 | WP_001718209.1 | hypothetical protein | - |
| COG38_RS04860 () | 890696..891640 | + | 945 | WP_001139505.1 | hypothetical protein | - |
| COG38_RS04865 () | 891640..892977 | + | 1338 | WP_001718210.1 | hypothetical protein | - |
| COG38_RS04870 () | 893001..893432 | + | 432 | WP_000613368.1 | hypothetical protein | - |
| COG38_RS04875 () | 893429..894046 | + | 618 | WP_000703984.1 | hypothetical protein | - |
| COG38_RS04880 () | 894111..896186 | + | 2076 | WP_000918397.1 | hypothetical protein | - |
| COG38_RS04885 () | 896190..896858 | + | 669 | WP_000056327.1 | hypothetical protein | - |
| COG38_RS04890 () | 896855..897121 | + | 267 | WP_000209262.1 | hypothetical protein | - |
| COG38_RS04895 () | 897121..898128 | + | 1008 | WP_001271165.1 | hypothetical protein | - |
| COG38_RS04900 () | 898128..898841 | + | 714 | WP_000063619.1 | hypothetical protein | - |
| COG38_RS04905 () | 899092..899439 | + | 348 | WP_001261327.1 | hypothetical protein | - |
| COG38_RS04910 () | 899589..900749 | + | 1161 | WP_000426903.1 | type I restriction enzyme HsdR N-terminal domain-containing protein | - |
| COG38_RS04915 () | 900790..902016 | + | 1227 | WP_072148422.1 | baseplate J/gp47 family protein | - |
| COG38_RS04920 () | 902000..902626 | + | 627 | WP_001199727.1 | hypothetical protein | - |
| COG38_RS04925 () | 902623..904008 | + | 1386 | WP_001718212.1 | hypothetical protein | - |
| COG38_RS04930 () | 904011..904556 | + | 546 | WP_001718213.1 | tail fiber assembly protein | - |
| COG38_RS04935 () | 904580..906406 | + | 1827 | WP_032200929.1 | prophage tail fiber N-terminal domain-containing protein | - |
| COG38_RS04940 () | 907011..907445 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| COG38_RS04945 () | 907586..908719 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|