MGE detailed information
MGE type: Genomic_island MGE length: 20372 bp
Accession: NZ_CP024263 Location: 4485938..4506309 Organism: Escherichia coli O169:H41 strain F6326-C1 Replicon: chromosome
Accession: NZ_CP024263 Location: 4485938..4506309 Organism: Escherichia coli O169:H41 strain F6326-C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG38_RS22860 () | 4482023..4482823 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| COG38_RS22865 () | 4482901..4483671 | + | 771 | WP_001612389.1 | class I SAM-dependent methyltransferase | - |
| COG38_RS22870 () | 4483719..4485077 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| COG38_RS22875 () | 4485149..4485904 | - | 756 | WP_001612392.1 | hydroxyacylglutathione hydrolase | - |
| COG38_RS22880 () | 4485938..4486660 | + | 723 | WP_001612393.1 | class I SAM-dependent methyltransferase | - |
| COG38_RS22885 () | 4486657..4487124 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| COG38_RS22890 () | 4487189..4487920 | + | 732 | WP_001301976.1 | DNA polymerase III subunit epsilon | - |
| COG38_RS22905 () | 4488457..4489257 | + | 801 | WP_001612394.1 | hypothetical protein | - |
| COG38_RS22910 () | 4489318..4489740 | - | 423 | WP_099560758.1 | hypothetical protein | - |
| COG38_RS22915 () | 4489737..4490186 | - | 450 | WP_001302684.1 | DUF1311 domain-containing protein | - |
| COG38_RS22920 () | 4490189..4491085 | - | 897 | WP_000002703.1 | hypothetical protein | - |
| COG38_RS22930 () | 4491106..4491585 | - | 480 | WP_001284959.1 | Major exported protein | VF |
| COG38_RS22935 () | 4491612..4492961 | - | 1350 | WP_001087747.1 | hypothetical protein | VF |
| COG38_RS22940 () | 4492972..4494273 | - | 1302 | Protein_4193 | hypothetical protein | VF |
| COG38_RS22945 () | 4494275..4495141 | + | 867 | Protein_4194 | Protein RhsD | VF |
| COG38_RS22950 () | 4495141..4495518 | + | 378 | WP_001077738.1 | hypothetical protein | - |
| COG38_RS22955 () | 4495987..4497123 | + | 1137 | WP_059321394.1 | ISAs1 family transposase ISEc1 | Transposase |
| COG38_RS22960 () | 4497169..4497543 | + | 375 | Protein_4197 | ISAs1 family transposase ISEc1 | Transposase |
| COG38_RS22965 () | 4497597..4498364 | - | 768 | WP_001118037.1 | 2-oxoglutaramate amidase | - |
| COG38_RS22970 () | 4498545..4498991 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| COG38_RS22975 () | 4499034..4501478 | - | 2445 | WP_001612411.1 | Acyl-coenzyme A dehydrogenase | VF |
| COG38_RS22980 () | 4501718..4502296 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| COG38_RS22985 () | 4502502..4503269 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| COG38_RS22990 () | 4503240..4503980 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| COG38_RS22995 () | 4504136..4504414 | - | 279 | WP_024171431.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| COG38_RS23000 () | 4504417..4504677 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| COG38_RS23005 () | 4504887..4505636 | + | 750 | WP_000056850.1 | Murein DD-endopeptidase MepH | VF |
| COG38_RS23010 () | 4505812..4506309 | + | 498 | WP_001612413.1 | REP-associated tyrosine transposase RayT | - |
| COG38_RS23015 () | 4506496..4508208 | - | 1713 | Protein_4208 | flagellar biosynthesis protein FlhA | - |
| COG38_RS23020 () | 4508180..4508965 | + | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| COG38_RS23025 () | 4509036..4510091 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| COG38_RS23030 () | 4510088..4510540 | + | 453 | WP_001717709.1 | GNAT family N-acetyltransferase | - |
| COG38_RS23035 () | 4510858..4511061 | + | 204 | Protein_4212 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|