MGE detailed information
MGE type: Genomic_island MGE length: 38141 bp
Accession: NZ_CP024260 Location: 3061420..3099560 Organism: Escherichia coli strain F5656C1 Replicon: chromosome
Accession: NZ_CP024260 Location: 3061420..3099560 Organism: Escherichia coli strain F5656C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4V61_RS16095 () | 3056835..3057128 | - | 294 | WP_000805509.1 | hypothetical protein | - |
| A4V61_RS16105 () | 3057350..3058168 | + | 819 | WP_000779419.1 | lipoprotein NlpA | - |
| A4V61_RS16110 () | 3058172..3059095 | - | 924 | WP_000535961.1 | carboxylate/amino acid/amine transporter | - |
| A4V61_RS16115 () | 3059206..3060390 | - | 1185 | WP_001172882.1 | sugar efflux transporter | - |
| A4V61_RS16130 () | 3061186..3062024 | - | 839 | Protein_2904 | DUF4942 domain-containing protein | - |
| A4V61_RS16135 () | 3062121..3062318 | - | 198 | WP_000839275.1 | DUF957 domain-containing protein | - |
| A4V61_RS16140 () | 3062330..3062818 | - | 489 | WP_000761693.1 | hypothetical protein | - |
| A4V61_RS16145 () | 3062815..3063192 | - | 378 | WP_000854743.1 | TA system toxin CbtA family protein | Toxin Detail |
| A4V61_RS16150 () | 3063282..3063650 | - | 369 | WP_001285298.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| A4V61_RS16155 () | 3063700..3064344 | - | 645 | WP_000086754.1 | hypothetical protein | - |
| A4V61_RS16160 () | 3064363..3064584 | - | 222 | WP_000692295.1 | DUF987 domain-containing protein | - |
| A4V61_RS16165 () | 3064653..3065129 | - | 477 | WP_032328266.1 | RadC family protein | - |
| A4V61_RS16170 () | 3065144..3065629 | - | 486 | WP_000206660.1 | antirestriction protein | - |
| A4V61_RS16175 () | 3065721..3066542 | - | 822 | WP_001706654.1 | DUF945 domain-containing protein | - |
| A4V61_RS16195 () | 3066868..3069714 | - | 2847 | WP_000820580.1 | Ag43/Cah family autotransporter adhesin | - |
| A4V61_RS16200 () | 3070086..3070958 | - | 873 | WP_001069707.1 | GTPase family protein | - |
| A4V61_RS26325 () | 3071068..3071439 | - | 372 | WP_000336763.1 | hypothetical protein | - |
| A4V61_RS26330 () | 3071586..3072086 | - | 501 | WP_001531236.1 | hypothetical protein | - |
| A4V61_RS16215 () | 3073260..3073346 | - | 87 | Protein_2918 | IS1 family transposase | - |
| A4V61_RS16225 () | 3073575..3074147 | - | 573 | WP_001355567.1 | hypothetical protein | - |
| A4V61_RS16230 () | 3074233..3074439 | - | 207 | WP_001095910.1 | AlpA family transcriptional regulator | - |
| A4V61_RS16240 () | 3074820..3075611 | - | 792 | WP_001531226.1 | hypothetical protein | - |
| A4V61_RS16245 () | 3076496..3076708 | + | 213 | WP_000453335.1 | hemolysin expression modulator Hha | - |
| A4V61_RS26335 () | 3076940..3077149 | + | 210 | Protein_2923 | hypothetical protein | - |
| A4V61_RS16255 () | 3077205..3077944 | + | 740 | Protein_2924 | IS3 family transposase IS1203 | Transposase |
| A4V61_RS16265 () | 3078617..3080125 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| A4V61_RS16270 () | 3080215..3080688 | + | 474 | Protein_2926 | IS3 family transposase IS629 | Transposase |
| A4V61_RS26340 () | 3080672..3080948 | + | 277 | Protein_2927 | acetolactate synthase small subunit | - |
| A4V61_RS16280 () | 3080950..3081732 | - | 783 | WP_001298267.1 | DeoR family transcriptional regulator | - |
| A4V61_RS16285 () | 3082038..3082958 | + | 921 | WP_000350273.1 | ribokinase | - |
| A4V61_RS16290 () | 3082986..3084302 | + | 1317 | WP_001682518.1 | L-fucose:H+ symporter permease | - |
| A4V61_RS16295 () | 3084314..3085327 | + | 1014 | WP_000107478.1 | aldose 1-epimerase family protein | - |
| A4V61_RS16305 () | 3086909..3087724 | - | 816 | WP_000956749.1 | helix-turn-helix domain-containing protein | - |
| A4V61_RS16315 () | 3087850..3088538 | + | 689 | Protein_2933 | IS1 family transposase IS1G | Transposase |
| A4V61_RS16320 () | 3088671..3089764 | + | 1094 | WP_085947916.1 | IS3 family transposase IS3 | Transposase |
| A4V61_RS16325 () | 3089924..3090640 | + | 717 | WP_000698190.1 | hypothetical protein | VF |
| A4V61_RS16330 () | 3090680..3091192 | + | 513 | WP_000773452.1 | CS1 fimbrial subunit A | VF |
| A4V61_RS16335 () | 3091261..3093861 | + | 2601 | WP_001201092.1 | hypothetical protein | VF |
| A4V61_RS16340 () | 3093876..3094970 | + | 1095 | WP_001530297.1 | CFA/I fimbrial subunit E | VF |
| A4V61_RS26115 () | 3096351..3096458 | + | 108 | Protein_2939 | transposase | - |
| A4V61_RS16350 () | 3097954..3098316 | - | 363 | Protein_2941 | IS110 family transposase ISKpn2 | Transposase |
| A4V61_RS16355 () | 3098465..3099283 | + | 819 | WP_001682626.1 | helix-turn-helix domain-containing protein | - |
| A4V61_RS16360 () | 3099375..3099647 | - | 273 | Protein_2943 | IS3 family transposase ISEc48 | Transposase |
| A4V61_RS16365 () | 3099708..3101102 | - | 1395 | WP_000952335.1 | IS21 family transposase | - |
| A4V61_RS16370 () | 3101197..3101690 | - | 494 | Protein_2945 | transposase | - |
| A4V61_RS16375 () | 3101719..3102900 | - | 1182 | WP_001683391.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|