MGE detailed information
MGE type: Genomic_island MGE length: 32043 bp
Accession: NZ_CP024260 Location: 1871088..1903130 Organism: Escherichia coli strain F5656C1 Replicon: chromosome
Accession: NZ_CP024260 Location: 1871088..1903130 Organism: Escherichia coli strain F5656C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4V61_RS09915 () | 1867514..1869157 | + | 1644 | WP_001355572.1 | fimbrial adhesin EcpD | - |
| A4V61_RS09920 () | 1869126..1869836 | + | 711 | WP_001350485.1 | fimbrial chaperone EcpE | - |
| A4V61_RS09925 () | 1870149..1870478 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| A4V61_RS09935 () | 1870726..1871339 | - | 614 | Protein_1798 | YagU family protein | - |
| A4V61_RS09945 () | 1871757..1872446 | + | 690 | WP_000070699.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| A4V61_RS09950 () | 1872443..1873399 | + | 957 | WP_000643332.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| A4V61_RS09955 () | 1873396..1875594 | + | 2199 | WP_000667035.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| A4V61_RS09960 () | 1875604..1876560 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| A4V61_RS09965 () | 1876611..1876949 | + | 339 | Protein_1803 | LysR family transcriptional regulator | - |
| A4V61_RS09970 () | 1877434..1877721 | - | 288 | WP_000617439.1 | PerC family transcriptional regulator | - |
| A4V61_RS09975 () | 1877981..1878421 | + | 441 | WP_023155323.1 | hypothetical protein ; Integrase | Integrase |
| A4V61_RS09980 () | 1878451..1879428 | - | 978 | WP_021542399.1 | Abi family protein | - |
| A4V61_RS09990 () | 1880298..1880912 | + | 615 | WP_032328543.1 | hypothetical protein | - |
| A4V61_RS09995 () | 1880931..1883036 | - | 2106 | WP_032328363.1 | hypothetical protein | - |
| A4V61_RS10000 () | 1883036..1884502 | - | 1467 | WP_054473707.1 | phage DNA ejection protein | - |
| A4V61_RS26275 () | 1884507..1884680 | - | 174 | WP_001018522.1 | hypothetical protein | - |
| A4V61_RS26050 () | 1884861..1885319 | - | 459 | WP_032235469.1 | hypothetical protein | - |
| A4V61_RS10010 () | 1885552..1888308 | - | 2757 | WP_032328654.1 | TOPRIM and DUF927 domain-containing protein | - |
| A4V61_RS10015 () | 1888321..1888923 | - | 603 | WP_032328337.1 | hypothetical protein | - |
| A4V61_RS10020 () | 1888916..1889137 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| A4V61_RS10025 () | 1889134..1889397 | - | 264 | WP_001024673.1 | hypothetical protein | - |
| A4V61_RS10030 () | 1889394..1889588 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| A4V61_RS10035 () | 1889581..1889799 | - | 219 | WP_001582517.1 | hypothetical protein | - |
| A4V61_RS10040 () | 1889961..1890164 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| A4V61_RS10050 () | 1890592..1891806 | - | 1215 | WP_000772646.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| A4V61_RS10065 () | 1892162..1893415 | - | 1254 | WP_000893277.1 | glutamate-5-semialdehyde dehydrogenase | - |
| A4V61_RS10070 () | 1893427..1894530 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| A4V61_RS10075 () | 1894818..1895873 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| A4V61_RS10080 () | 1895912..1896313 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| A4V61_RS10085 () | 1896371..1897615 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1897031..1897111 | - | 81 | NuclAT_12 | - | - |
| - () | 1897031..1897111 | - | 81 | NuclAT_12 | - | - |
| - () | 1897031..1897111 | - | 81 | NuclAT_12 | - | - |
| - () | 1897031..1897111 | - | 81 | NuclAT_12 | - | - |
| A4V61_RS10090 () | 1897707..1898165 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| A4V61_RS10095 () | 1898426..1899883 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| A4V61_RS10100 () | 1899940..1900461 | - | 522 | Protein_1827 | peptide chain release factor H | - |
| A4V61_RS10105 () | 1900460..1900663 | - | 204 | Protein_1828 | RNA ligase RtcB family protein | - |
| A4V61_RS10110 () | 1900909..1901184 | - | 276 | Protein_1829 | GNAT family N-acetyltransferase | - |
| A4V61_RS10115 () | 1901245..1902213 | - | 969 | WP_023486738.1 | IS5 family transposase IS903B | Transposase |
| A4V61_RS10125 () | 1902241..1902426 | - | 186 | Protein_1831 | GNAT family N-acetyltransferase | - |
| A4V61_RS10130 () | 1902436..1902834 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| A4V61_RS10135 () | 1902837..1903130 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| A4V61_RS10140 () | 1903182..1904237 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| A4V61_RS10145 () | 1904308..1905231 | - | 924 | WP_001232570.1 | putative lateral flagellar export/assembly protein LafU | - |
| A4V61_RS10150 () | 1905234..1906097 | - | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| A4V61_RS10155 () | 1906110..1906829 | - | 720 | WP_000938740.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| A4V61_RS10160 () | 1906849..1907316 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|