MGE detailed information
MGE type: Prophage MGE length: 20006 bp
Accession: NZ_CP024243 Location: 1650139..1670144 Organism: Escherichia coli O128:H27 strain 90-9281 Replicon: chromosome
Accession: NZ_CP024243 Location: 1650139..1670144 Organism: Escherichia coli O128:H27 strain 90-9281 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG34_RS08585 () | 1645244..1645636 | - | 393 | WP_099588366.1 | hypothetical protein | - |
| COG34_RS08590 () | 1645816..1646343 | + | 528 | Protein_1557 | inverse autotransporter beta domain-containing protein | - |
| COG34_RS08595 () | 1646477..1647129 | - | 653 | Protein_1558 | type VI secretion system protein TssL, short form | - |
| COG34_RS08600 () | 1647126..1648463 | - | 1338 | Protein_1559 | type VI secretion system baseplate subunit TssK | - |
| COG34_RS08605 () | 1648479..1650023 | - | 1545 | WP_099588367.1 | type VI secretion system contractile sheath large subunit | - |
| COG34_RS08610 () | 1650139..1650878 | + | 740 | Protein_1561 | IS3 family transposase IS629 | Transposase |
| COG34_RS08620 () | 1651536..1651691 | + | 156 | WP_000587091.1 | hypothetical protein | - |
| COG34_RS08625 () | 1651858..1652969 | - | 1112 | Protein_1563 | IS4 family transposase IS186B | Transposase |
| COG34_RS08630 () | 1653026..1654408 | + | 1383 | Protein_1564 | group II intron reverse transcriptase/maturase | - |
| COG34_RS08635 () | 1654498..1654971 | + | 474 | Protein_1565 | IS3 family transposase IS629 | Transposase |
| COG34_RS08640 () | 1654974..1655474 | - | 501 | WP_074502630.1 | hypothetical protein | VF |
| COG34_RS08650 () | 1655981..1656172 | + | 192 | WP_001287796.1 | DUF4222 domain-containing protein | - |
| COG34_RS08655 () | 1656297..1656458 | - | 162 | WP_000124170.1 | hypothetical protein | - |
| COG34_RS08660 () | 1656555..1657178 | - | 624 | WP_001536432.1 | hypothetical protein | - |
| COG34_RS26915 () | 1657697..1657924 | - | 228 | WP_155522400.1 | hypothetical protein | - |
| COG34_RS08665 () | 1658248..1658724 | + | 477 | WP_074502628.1 | ProQ/FinO family protein | - |
| COG34_RS08670 () | 1658726..1659268 | - | 543 | WP_099588368.1 | hypothetical protein | - |
| COG34_RS08680 () | 1659553..1659789 | - | 237 | WP_000958091.1 | AlpA family transcriptional regulator | - |
| COG34_RS08685 () | 1659858..1660433 | - | 576 | WP_099588369.1 | hypothetical protein | - |
| COG34_RS27195 () | 1660448..1660597 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| COG34_RS08690 () | 1660818..1661549 | - | 732 | WP_001075480.1 | inovirus Gp2 family protein | - |
| COG34_RS08700 () | 1663190..1663999 | + | 810 | WP_099588370.1 | hypothetical protein | - |
| COG34_RS08705 () | 1663996..1664928 | - | 933 | WP_099588454.1 | hypothetical protein | - |
| COG34_RS08710 () | 1665035..1665919 | + | 885 | WP_099588371.1 | 50S ribosome-binding GTPase | - |
| COG34_RS08715 () | 1666038..1666715 | + | 678 | WP_074504021.1 | hypothetical protein | - |
| COG34_RS08720 () | 1666721..1666954 | + | 234 | WP_099588372.1 | DUF905 family protein | - |
| COG34_RS08730 () | 1667053..1667871 | + | 819 | WP_074503010.1 | DUF945 domain-containing protein | - |
| COG34_RS08735 () | 1667963..1668448 | + | 486 | WP_000206660.1 | antirestriction protein | - |
| COG34_RS08740 () | 1668464..1668940 | + | 477 | WP_074503008.1 | RadC family protein | - |
| COG34_RS08745 () | 1669009..1669230 | + | 222 | WP_000692295.1 | DUF987 domain-containing protein | - |
| COG34_RS08750 () | 1669310..1669678 | + | 369 | WP_024183700.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| COG34_RS08755 () | 1669767..1670144 | + | 378 | WP_074503007.1 | TA system toxin CbtA family protein | Toxin Detail |
| COG34_RS08760 () | 1670141..1670629 | + | 489 | WP_000777667.1 | hypothetical protein | - |
| COG34_RS08765 () | 1670641..1670838 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| COG34_RS08770 () | 1670923..1671687 | + | 765 | Protein_1590 | DUF4942 domain-containing protein | - |
| COG34_RS26920 () | 1673012..1673125 | + | 114 | Protein_1592 | restriction endonuclease subunit M | - |
| COG34_RS08785 () | 1673197..1673460 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| COG34_RS08790 () | 1673457..1673783 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|