MGE detailed information
MGE type: Genomic_island MGE length: 30758 bp
Accession: NZ_CP024239 Location: 2365403..2396160 Organism: Escherichia coli O15:H11 strain 90-9272 Replicon: chromosome
Accession: NZ_CP024239 Location: 2365403..2396160 Organism: Escherichia coli O15:H11 strain 90-9272 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COG31_RS14240 (2361121) | 2361121..2361459 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| COG31_RS14245 (2361435) | 2361435..2363132 | + | 1698 | WP_001469712.1 | protein-disulfide reductase DsbD | - |
| COG31_RS14250 (2363169) | 2363169..2363744 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| COG31_RS14260 (2364106) | 2364106..2365350 | + | 1245 | WP_001219067.1 | integrase arm-type DNA-binding domain-containing protein | - |
| COG31_RS28390 (2365403) | 2365403..2366011 | - | 609 | WP_249929732.1 | DUF4868 domain-containing protein | - |
| COG31_RS28395 (2365977) | 2365977..2366411 | - | 435 | WP_249929728.1 | hypothetical protein | - |
| COG31_RS28715 (2366433) | 2366433..2367068 | - | 636 | WP_000204790.1 | anti-phage protein KwaA | - |
| COG31_RS14275 (2367365) | 2367365..2368372 | + | 1008 | WP_000572864.1 | hypothetical protein | - |
| COG31_RS14280 (2368438) | 2368438..2369538 | - | 1101 | WP_000214245.1 | DNA cytosine methyltransferase | - |
| COG31_RS14285 (2369773) | 2369773..2370249 | - | 477 | WP_023150684.1 | very short patch repair endonuclease | - |
| COG31_RS14290 (2370392) | 2370392..2370703 | - | 312 | WP_000379387.1 | conjugal transfer protein TraD | - |
| COG31_RS14295 (2371527) | 2371527..2373041 | + | 1515 | WP_000964106.1 | MobQ family relaxase | - |
| COG31_RS14300 (2373047) | 2373047..2373685 | - | 639 | WP_023150685.1 | hypothetical protein | - |
| COG31_RS14305 (2373675) | 2373675..2374514 | - | 840 | WP_000476438.1 | GTPase domain-containing protein | - |
| COG31_RS14310 (2375107) | 2375107..2375586 | + | 480 | WP_249929729.1 | hypothetical protein | - |
| COG31_RS14315 (2375728) | 2375728..2376237 | - | 510 | WP_000122167.1 | TIR domain-containing protein | - |
| COG31_RS14320 (2376375) | 2376375..2377211 | + | 837 | WP_001151472.1 | DUF6430 domain-containing protein | - |
| COG31_RS14325 (2377267) | 2377267..2377542 | - | 276 | WP_000428934.1 | hypothetical protein | - |
| COG31_RS14330 (2377552) | 2377552..2378082 | - | 531 | WP_001433720.1 | lipoprotein | - |
| COG31_RS14335 (2378305) | 2378305..2378640 | + | 336 | WP_001433719.1 | helix-turn-helix transcriptional regulator | - |
| COG31_RS14345 (2379993) | 2379993..2380694 | + | 702 | WP_000020958.1 | hypothetical protein | - |
| COG31_RS14350 (2380796) | 2380796..2381263 | + | 468 | WP_001233363.1 | DUF4756 family protein | - |
| COG31_RS14355 (2381417) | 2381417..2381821 | + | 405 | WP_001287394.1 | H-NS family nucleoid-associated regulatory protein | - |
| COG31_RS14365 (2382737) | 2382737..2383117 | - | 381 | WP_000711006.1 | hypothetical protein | - |
| COG31_RS14370 (2383167) | 2383167..2383457 | - | 291 | WP_000041813.1 | hypothetical protein | - |
| COG31_RS14375 (2383552) | 2383552..2383839 | - | 288 | WP_001291073.1 | hypothetical protein | - |
| COG31_RS14380 (2383856) | 2383856..2384242 | - | 387 | WP_001545719.1 | hypothetical protein | - |
| COG31_RS14385 (2384257) | 2384257..2384568 | - | 312 | WP_000837631.1 | hypothetical protein | - |
| COG31_RS14390 (2384565) | 2384565..2384813 | - | 249 | WP_000616796.1 | AlpA family transcriptional regulator | - |
| COG31_RS14395 (2385029) | 2385029..2385889 | - | 861 | WP_000158645.1 | DUF6387 family protein | - |
| COG31_RS14405 (2386809) | 2386809..2388347 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| COG31_RS14415 (2388713) | 2388713..2390047 | + | 1335 | WP_099550774.1 | cadaverine/lysine antiporter | - |
| COG31_RS14420 (2390127) | 2390127..2392274 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| COG31_RS14425 (2392333) | 2392333..2393790 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| COG31_RS14430 (2394027) | 2394027..2395544 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| COG31_RS14435 (2395663) | 2395663..2395836 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| COG31_RS14440 (2395864) | 2395864..2396160 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| COG31_RS14450 (2396387) | 2396387..2396659 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| COG31_RS14455 (2396671) | 2396671..2396901 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| COG31_RS14460 (2397082) | 2397082..2398713 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| COG31_RS14465 (2398710) | 2398710..2399429 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|