MGE detailed information
MGE type: Genomic_island MGE length: 27709 bp
Accession: NZ_CP024232 Location: 2923417..2951125 Organism: Escherichia coli O6:H16 strain 2014EL-1346-6 Replicon: chromosome
Accession: NZ_CP024232 Location: 2923417..2951125 Organism: Escherichia coli O6:H16 strain 2014EL-1346-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNZ63_RS15205 () | 2918701..2919072 | + | 372 | WP_000820119.1 | type II secretion system minor pseudopilin GspI | - |
| CNZ63_RS15210 () | 2919069..2919674 | + | 606 | WP_011579195.1 | type II secretion system minor pseudopilin GspJ | - |
| CNZ63_RS15215 () | 2919671..2920648 | + | 978 | WP_023486933.1 | type II secretion system minor pseudopilin GspK | - |
| CNZ63_RS15220 () | 2920645..2921823 | + | 1179 | WP_000097217.1 | type II secretion system protein GspL | - |
| CNZ63_RS15225 () | 2921825..2922361 | + | 537 | WP_000942814.1 | GspM family type II secretion system protein YghD | - |
| CNZ63_RS15230 () | 2923417..2924193 | + | 777 | WP_000124278.1 | hypothetical protein | VF |
| CNZ63_RS15235 () | 2924190..2924858 | + | 669 | WP_000590263.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CNZ63_RS15240 () | 2925860..2926750 | + | 891 | WP_000217288.1 | hypothetical protein | VF |
| CNZ63_RS15245 () | 2926747..2927736 | + | 990 | WP_023486934.1 | hypothetical protein | - |
| CNZ63_RS15250 () | 2927736..2928692 | + | 957 | WP_001393366.1 | hypothetical protein | - |
| CNZ63_RS15255 () | 2928689..2929327 | + | 639 | WP_000694922.1 | hypothetical protein | - |
| CNZ63_RS15260 () | 2929360..2929647 | + | 288 | WP_071597400.1 | hypothetical protein | - |
| CNZ63_RS15265 () | 2929616..2930563 | + | 948 | WP_000671028.1 | alpha/beta hydrolase | - |
| CNZ63_RS15270 () | 2930917..2933046 | + | 2130 | WP_001397770.1 | hypothetical protein | VF |
| CNZ63_RS15275 () | 2933083..2934333 | + | 1251 | WP_001023681.1 | hypothetical protein | VF |
| CNZ63_RS15280 () | 2934488..2935525 | - | 1038 | Protein_2750 | IS630 family transposase ISEc40 | Transposase |
| CNZ63_RS15285 () | 2935563..2937011 | - | 1449 | WP_023486935.1 | hypothetical protein | VF |
| CNZ63_RS15290 () | 2937008..2937748 | - | 741 | WP_000030750.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| CNZ63_RS15295 () | 2937758..2939434 | - | 1677 | WP_001305965.1 | hypothetical protein | VF |
| CNZ63_RS15300 () | 2939458..2940606 | - | 1149 | WP_000905925.1 | hypothetical protein | VF |
| CNZ63_RS15305 () | 2940678..2941661 | - | 984 | WP_001355482.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| CNZ63_RS15310 () | 2942472..2942642 | - | 171 | Protein_2756 | IS110 family transposase | - |
| CNZ63_RS15315 () | 2942985..2943827 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| CNZ63_RS15320 () | 2943912..2944109 | - | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| CNZ63_RS28730 () | 2944185..2944334 | - | 150 | Protein_2759 | hypothetical protein | - |
| CNZ63_RS15325 () | 2944331..2944699 | - | 369 | WP_140159973.1 | TA system toxin CbtA family protein | Toxin Detail |
| CNZ63_RS15330 () | 2944797..2945165 | - | 369 | WP_001285580.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CNZ63_RS15335 () | 2945244..2945465 | - | 222 | WP_000691818.1 | DUF987 domain-containing protein | - |
| CNZ63_RS15345 () | 2945602..2945781 | - | 180 | WP_001398324.1 | hypothetical protein | - |
| CNZ63_RS15350 () | 2945823..2946520 | + | 698 | Protein_2764 | IS1 family transposase IS1X2 | Transposase |
| CNZ63_RS15360 () | 2947329..2947553 | + | 225 | WP_001395295.1 | IS3 family transposase ISEc48 | Transposase |
| CNZ63_RS15365 () | 2947555..2948334 | - | 780 | Protein_2766 | IS3 family transposase ISEhe3 | Transposase |
| CNZ63_RS15370 () | 2948501..2949469 | - | 969 | WP_023486738.1 | IS5 family transposase IS903B | Transposase |
| CNZ63_RS15375 () | 2949502..2949615 | + | 114 | Protein_2768 | IS1 family transposase | - |
| CNZ63_RS15380 () | 2949863..2951125 | - | 1263 | WP_001218852.1 | hypothetical protein ; Integrase | Integrase |
| CNZ63_RS15390 () | 2951504..2952211 | - | 708 | WP_000234526.1 | DUF554 domain-containing protein | - |
| CNZ63_RS29260 () | 2952364..2952447 | + | 84 | WP_212734590.1 | hypothetical protein | - |
| CNZ63_RS15400 () | 2952610..2954745 | + | 2136 | WP_000839798.1 | ornithine decarboxylase | - |
| CNZ63_RS15405 () | 2954794..2956050 | - | 1257 | WP_001355640.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|