MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38467 bp
Accession: NZ_CP024229 Location: 1..38467 Organism: Escherichia coli O25:NM strain 2014EL-1343-2 Replicon: plasmid unnamed1
Accession: NZ_CP024229 Location: 1..38467 Organism: Escherichia coli O25:NM strain 2014EL-1343-2 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A3411_RS26835 () | 1..138 | + | 138 | Protein_0 | type IV secretion system DNA-binding domain-containing protein | - |
| A3411_RS25310 () | 198..1811 | - | 1614 | WP_099583049.1 | IS66 family transposase ISEc47 | Transposase |
| A3411_RS25315 () | 1842..2192 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| A3411_RS25320 () | 2189..2614 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| A3411_RS25325 () | 2811..3023 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| A3411_RS25330 () | 3268..3730 | + | 463 | Protein_5 | thermonuclease family protein | - |
| A3411_RS25335 () | 3776..3985 | + | 210 | WP_001353639.1 | transcriptional regulator | - |
| A3411_RS25340 () | 4023..4613 | + | 591 | WP_074480776.1 | DUF2726 domain-containing protein | - |
| A3411_RS25350 () | 4949..6520 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| A3411_RS25355 () | 6540..6887 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| A3411_RS25360 () | 6887..7565 | - | 679 | Protein_10 | IS66 family insertion sequence hypothetical protein | - |
| A3411_RS25365 () | 7674..7940 | + | 267 | WP_099583064.1 | hypothetical protein | - |
| - () | 8092..8153 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 8092..8153 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 8092..8153 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 8092..8153 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| A3411_RS25375 () | 8140..8346 | + | 207 | WP_001362723.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| A3411_RS25380 () | 8630..8887 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| A3411_RS25390 () | 9122..9196 | + | 75 | WP_011387702.1 | RepA leader peptide Tap | - |
| A3411_RS25395 () | 9189..10046 | + | 858 | WP_074480778.1 | incFII family plasmid replication initiator RepA | - |
| A3411_RS27000 () | 10747..10926 | + | 180 | WP_074483066.1 | hypothetical protein | - |
| A3411_RS25410 () | 11077..11664 | - | 588 | Protein_17 | IS91 family transposase ISSbo1 | Transposase |
| A3411_RS25420 () | 11923..13104 | + | 1182 | WP_001467544.1 | DUF3800 domain-containing protein | - |
| A3411_RS25425 () | 13261..13841 | + | 581 | Protein_19 | IS3 family transposase IS2 | Transposase |
| A3411_RS25430 () | 14118..14528 | + | 411 | Protein_20 | Tn3 family transposase ISEc63 | Transposase |
| A3411_RS25435 () | 14731..15462 | - | 732 | Protein_21 | IS3 family transposase IS2 | Transposase |
| A3411_RS25440 () | 15528..16325 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| A3411_RS25445 () | 16325..17497 | - | 1173 | WP_001651771.1 | IS21 family transposase IS21 | Transposase |
| A3411_RS25450 () | 17595..18139 | - | 545 | Protein_24 | IS3 family transposase IS2 | Transposase |
| A3411_RS25460 () | 19113..19967 | - | 855 | WP_000289148.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| A3411_RS25465 () | 19970..21092 | - | 1123 | Protein_26 | pilus biosynthesis protein | - |
| A3411_RS25470 () | 21107..22132 | - | 1026 | WP_001759772.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| A3411_RS25475 () | 22116..23451 | - | 1336 | Protein_28 | Toxin coregulated pilus biosynthesis protein T | VF |
| A3411_RS25480 () | 23649..24134 | - | 486 | WP_000336152.1 | hypothetical protein | - |
| A3411_RS25485 () | 24122..24950 | - | 829 | Protein_30 | pilus assembly protein | - |
| A3411_RS26840 () | 24952..25512 | - | 561 | WP_001047585.1 | hypothetical protein | - |
| A3411_RS25495 () | 25515..26972 | - | 1458 | WP_000768353.1 | hypothetical protein | - |
| A3411_RS25500 () | 26990..27403 | - | 414 | WP_001201934.1 | TcpQ domain-containing protein | - |
| A3411_RS25505 () | 27422..28993 | - | 1572 | WP_001759776.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| A3411_RS25510 () | 29056..29766 | - | 711 | WP_157774444.1 | Toxin coregulated pilin | VF |
| A3411_RS25515 () | 30065..30415 | - | 351 | WP_099583054.1 | hypothetical protein | VF |
| A3411_RS25520 () | 30523..31354 | - | 832 | Protein_37 | transcriptional regulator HilD | - |
| A3411_RS25525 () | 31672..31977 | - | 306 | WP_000336590.1 | Major pilu subunit operon regulatory protein PapB | VF |
| A3411_RS25535 () | 32929..33057 | + | 129 | WP_032164396.1 | hypothetical protein | - |
| A3411_RS25540 () | 33178..33918 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| A3411_RS25545 () | 34161..35138 | - | 978 | WP_000361613.1 | RepB family plasmid replication initiator protein | - |
| A3411_RS25550 () | 35589..35891 | + | 303 | Protein_42 | IS3 family transposase ISEc31 | Transposase |
| A3411_RS25555 () | 35904..37056 | - | 1153 | Protein_43 | IS30 family transposase IS30D | Transposase |
| A3411_RS25565 () | 37121..37547 | + | 427 | Protein_44 | IS3 family transposase | - |
| A3411_RS25575 () | 38219..38467 | + | 249 | WP_032219984.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|