MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60258 bp
Accession: NZ_CP024156 Location: 1..60258 Organism: Escherichia coli strain 14EC047 Replicon: plasmid p14EC047a
Accession: NZ_CP024156 Location: 1..60258 Organism: Escherichia coli strain 14EC047 Replicon: plasmid p14EC047a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR540_RS25545 (CR540_26915) | 1044..1679 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CR540_RS25550 (CR540_26920) | 1683..2165 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| CR540_RS25555 (CR540_26925) | 2232..2789 | - | 558 | WP_000095051.1 | type 4 pilus major pilin | - |
| CR540_RS27895 | 2833..3549 | - | 717 | WP_249929345.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CR540_RS27900 | 3689..3940 | - | 252 | WP_249929346.1 | hypothetical protein | - |
| CR540_RS25565 (CR540_26935) | 3931..5468 | - | 1538 | Protein_6 | Type II secretion system protein E | VF |
| CR540_RS25570 (CR540_26940) | 5493..5987 | - | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| CR540_RS25575 (CR540_26945) | 5971..7281 | - | 1311 | WP_001420476.1 | type 4b pilus protein PilO2 | - |
| CR540_RS25580 (CR540_26950) | 7332..8975 | - | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| CR540_RS25585 (CR540_26955) | 8968..9503 | - | 536 | Protein_10 | sigma 54-interacting transcriptional regulator | - |
| CR540_RS25590 (CR540_26960) | 9550..11310 | - | 1761 | WP_249929347.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CR540_RS25595 (CR540_26965) | 11523..12578 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| CR540_RS25600 (CR540_26970) | 12597..13736 | - | 1140 | WP_001542008.1 | Type IV secretion system protein virB10 | VF |
| CR540_RS28155 | 13726..13974 | - | 249 | WP_020246051.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CR540_RS28160 | 13971..14495 | - | 525 | WP_250696474.1 | Type IV secretion system protein PtlF | VF |
| CR540_RS25610 (CR540_26980) | 14492..15226 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| CR540_RS25615 (CR540_26985) | 15226..15360 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| CR540_RS25620 (CR540_26990) | 15392..17748 | - | 2357 | Protein_18 | conjugal transfer protein | - |
| CR540_RS25625 (CR540_26995) | 17754..18074 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| CR540_RS25630 (CR540_27000) | 18145..18333 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| CR540_RS25635 (CR540_27005) | 18320..19018 | - | 699 | WP_249929348.1 | Type IV secretion system protein virB1 | VF |
| CR540_RS25640 (CR540_27010) | 19119..19436 | - | 318 | WP_249929349.1 | hypothetical protein | - |
| CR540_RS25645 (CR540_27015) | 19555..19992 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| CR540_RS27905 | 19998..20234 | - | 237 | WP_244429287.1 | TcpQ domain-containing protein | - |
| CR540_RS25650 (CR540_27020) | 20420..21232 | - | 813 | WP_249929350.1 | hypothetical protein | - |
| CR540_RS25655 (CR540_27025) | 21235..21534 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| CR540_RS25660 (CR540_27030) | 21582..22391 | + | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| CR540_RS25665 (CR540_27035) | 22614..22838 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| CR540_RS25670 (CR540_27040) | 22847..23491 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| CR540_RS25675 (CR540_27045) | 23497..24492 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| CR540_RS25680 (CR540_27050) | 24496..24753 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| CR540_RS25690 (CR540_27060) | 25032..25289 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| CR540_RS25695 (CR540_27065) | 25323..25976 | - | 654 | WP_053899054.1 | hypothetical protein | - |
| CR540_RS25700 (CR540_27070) | 26161..26604 | - | 444 | WP_022645140.1 | NfeD family protein | - |
| CR540_RS25710 (CR540_27080) | 26984..27937 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| CR540_RS27340 | 27964..28140 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| CR540_RS25715 (CR540_27085) | 28133..28348 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| CR540_RS25720 (CR540_27090) | 28341..28793 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| CR540_RS25725 (CR540_27095) | 29945..30957 | + | 1013 | Protein_39 | plasmid replication initiator RepA | - |
| CR540_RS25740 (CR540_27110) | 32495..32647 | + | 153 | Protein_40 | DUF5431 family protein | - |
| CR540_RS27910 (CR540_27110) | 32592..32714 | + | 123 | WP_223163518.1 | Hok/Gef family protein | - |
| CR540_RS25745 (CR540_27115) | 32863..33459 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| CR540_RS27915 | 33477..33761 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| CR540_RS25755 (CR540_27125) | 33835..34511 | - | 677 | Protein_44 | division plane positioning ATPase MipZ | - |
| CR540_RS25765 (CR540_27135) | 35095..35424 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| CR540_RS27350 | 35533..35679 | - | 147 | WP_001356709.1 | hypothetical protein | - |
| CR540_RS25770 (CR540_27145) | 36006..36329 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| CR540_RS25775 (CR540_27150) | 36371..36580 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| CR540_RS25780 (CR540_27155) | 36677..36901 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| CR540_RS25785 (CR540_27160) | 36953..37213 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| CR540_RS25790 (CR540_27165) | 37203..37454 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| CR540_RS25805 (CR540_27180) | 38003..38281 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| CR540_RS25810 (CR540_27185) | 38701..38967 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CR540_RS27920 | 39074..39517 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| CR540_RS25820 (CR540_27195) | 39814..39996 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| CR540_RS25825 (CR540_27200) | 40020..40457 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CR540_RS25830 (CR540_27205) | 40588..40914 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| CR540_RS25835 (CR540_27210) | 40934..41641 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| CR540_RS25840 (CR540_27215) | 41643..42395 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| CR540_RS25845 (CR540_27220) | 42505..42813 | - | 309 | WP_105075932.1 | zinc transporter | - |
| CR540_RS25850 (CR540_27225) | 43181..43522 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| CR540_RS25855 (CR540_27230) | 43519..47831 | + | 4313 | Protein_62 | relaxase | - |
| CR540_RS25860 (CR540_27240) | 48142..49122 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| CR540_RS25865 (CR540_27245) | 49252..50877 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| CR540_RS25870 (CR540_27250) | 51001..51654 | - | 654 | WP_101969572.1 | phosphatase PAP2 family protein | - |
| CR540_RS27355 | 51679..52119 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| CR540_RS25880 (CR540_27260) | 52465..52671 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| CR540_RS25885 (CR540_27265) | 52740..54905 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| CR540_RS25890 (CR540_27270) | 54910..55484 | - | 575 | Protein_69 | DNA topoisomerase III | - |
| CR540_RS25895 (CR540_27275) | 55654..56730 | - | 1077 | WP_233707891.1 | PcfJ domain-containing protein | - |
| CR540_RS25900 (CR540_27280) | 57422..57954 | - | 533 | Protein_71 | thermonuclease family protein | - |
| CR540_RS25905 (CR540_27285) | 57984..58637 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| CR540_RS25910 (CR540_27290) | 58649..59771 | - | 1123 | Protein_73 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|