MGE detailed information
MGE type: Prophage MGE length: 25066 bp
Accession: NZ_CP024155 Location: 2389946..2415011 Organism: Escherichia coli strain 14EC047 Replicon: chromosome
Accession: NZ_CP024155 Location: 2389946..2415011 Organism: Escherichia coli strain 14EC047 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR540_RS12105 (2385009) | 2385009..2385809 | + | 801 | WP_001027931.1 | DUF218 domain-containing protein YdcF | - |
| CR540_RS12110 (2386006) | 2386006..2387445 | + | 1440 | WP_000115957.1 | aldehyde dehydrogenase | - |
| CR540_RS12115 (2387487) | 2387487..2388488 | - | 1002 | WP_000048667.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| CR540_RS12120 (2388677) | 2388677..2389207 | + | 531 | WP_001307188.1 | cytochrome b561 | - |
| CR540_RS12125 (2389452) | 2389452..2389625 | + | 174 | WP_000731833.1 | periplasmic protein | - |
| CR540_RS27665 (2389651) | 2389651..2389719 | + | 69 | WP_212591405.1 | hypothetical protein | - |
| CR540_RS12130 (2389697) | 2389697..2389828 | - | 132 | WP_228940733.1 | type I toxin-antitoxin system Hok family toxin | - |
| CR540_RS27670 (2389767) | 2389767..2389904 | - | 138 | Protein_2335 | hypothetical protein | - |
| CR540_RS12135 (2389946) | 2389946..2390386 | - | 441 | Protein_2336 | IS3 family transposase IS150 | Transposase |
| CR540_RS12145 (2390471) | 2390471..2391492 | + | 1022 | Protein_2337 | IS21 family transposase IS100kyp | Transposase |
| CR540_RS12150 (2391489) | 2391489..2392271 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| CR540_RS12160 (2392339) | 2392339..2393273 | - | 935 | Protein_2339 | IS3 family transposase IS150 | Transposase |
| CR540_RS12170 (2393650) | 2393650..2395290 | + | 1641 | WP_001098551.1 | Methyl-accepting chemotaxis protein III | VF |
| CR540_RS12175 (2395328) | 2395328..2396251 | - | 924 | WP_000414564.1 | LysR substrate-binding domain-containing protein | - |
| CR540_RS12180 (2396468) | 2396468..2397811 | + | 1344 | WP_000013786.1 | VOC family protein | - |
| CR540_RS12185 (2398036) | 2398036..2399691 | + | 1656 | WP_000375956.1 | glucan biosynthesis protein OpgD | - |
| CR540_RS12190 (2399831) | 2399831..2400055 | + | 225 | WP_001296778.1 | YdcH family protein | - |
| CR540_RS12195 (2400118) | 2400118..2400654 | + | 537 | WP_000140877.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| CR540_RS12200 (2400649) | 2400649..2401629 | - | 981 | WP_001234054.1 | YdcK family protein | - |
| CR540_RS12205 (2401753) | 2401753..2402745 | + | 993 | WP_001296725.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| CR540_RS12210 (2402742) | 2402742..2403335 | + | 594 | WP_001721348.1 | tellurite resistance methyltransferase TehB | - |
| CR540_RS12215 (2403638) | 2403638..2404306 | + | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| CR540_RS12220 (2404405) | 2404405..2404830 | - | 426 | Protein_2350 | IS200/IS605 family transposase | - |
| CR540_RS12225 (2404838) | 2404838..2406046 | + | 1209 | WP_134894882.1 | IS200-IS605 family transposase IS609 | Transposase |
| CR540_RS12230 (2406086) | 2406086..2407300 | - | 1215 | WP_001349372.1 | BenE family transporter YdcO | - |
| CR540_RS12235 (2407353) | 2407353..2407889 | + | 537 | WP_000429141.1 | DNA-binding transcriptional regulator SutR | - |
| CR540_RS12240 (2407962) | 2407962..2409923 | + | 1962 | WP_001307191.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| CR540_RS12245 (2410015) | 2410015..2410245 | - | 231 | WP_000494244.1 | YncJ family protein | - |
| CR540_RS12250 (2410467) | 2410467..2410643 | + | 177 | WP_000813794.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| CR540_RS12255 (2410689) | 2410689..2411105 | + | 417 | WP_001270286.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| CR540_RS12260 (2411184) | 2411184..2412590 | + | 1407 | WP_000760629.1 | PLP-dependent aminotransferase family protein | - |
| CR540_RS12265 (2412835) | 2412835..2413980 | + | 1146 | WP_000047456.1 | ABC transporter substrate-binding protein | - |
| CR540_RS12270 (2413998) | 2413998..2415011 | + | 1014 | WP_000220396.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CR540_RS12275 (2415012) | 2415012..2415953 | + | 942 | WP_001251319.1 | ABC transporter permease | - |
| CR540_RS12280 (2415943) | 2415943..2416737 | + | 795 | WP_000555481.1 | ABC transporter permease | - |
| CR540_RS12285 (2416759) | 2416759..2418183 | + | 1425 | WP_001163892.1 | aminobutyraldehyde dehydrogenase | - |
| CR540_RS12290 (2418280) | 2418280..2418375 | - | 96 | WP_001303494.1 | stress response membrane protein YncL | - |
| CR540_RS12295 (2418570) | 2418570..2418743 | + | 174 | WP_000061178.1 | orphan toxin OrtT | - |
| CR540_RS12300 (2418829) | 2418829..2419062 | + | 234 | WP_000018633.1 | DUF2526 family protein YdcY | - |
| CR540_RS12305 (2419063) | 2419063..2419512 | - | 450 | WP_001076535.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|