MGE detailed information
MGE type: Conjugative plasmid MGE length: 84404 bp
Accession: NZ_CP024154 Location: 1..84404 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033g
Accession: NZ_CP024154 Location: 1..84404 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033g
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR539_RS27285 () | 91..993 | + | 903 | WP_077900409.1 | DUF1281 domain-containing protein | - |
| CR539_RS27290 () | 990..1303 | + | 314 | Protein_1 | hypothetical protein | - |
| CR539_RS27295 () | 1379..2062 | + | 684 | WP_000086160.1 | DNA methylase | - |
| CR539_RS27300 () | 2063..2284 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| CR539_RS27305 () | 2298..2732 | + | 435 | WP_062877223.1 | DUF1380 family protein | - |
| CR539_RS27310 () | 2777..3547 | + | 771 | WP_089563341.1 | hypothetical protein | - |
| CR539_RS27325 () | 4086..4388 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| CR539_RS27330 () | 4435..4857 | + | 423 | WP_021569056.1 | DUF1380 family protein | - |
| CR539_RS27335 () | 4854..5045 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| CR539_RS27345 () | 5183..5431 | + | 249 | WP_024189960.1 | hypothetical protein | - |
| CR539_RS27355 () | 5815..6342 | + | 528 | WP_089563369.1 | single-stranded DNA-binding protein | - |
| CR539_RS27360 () | 6400..6633 | + | 234 | WP_032188375.1 | DUF905 domain-containing protein | - |
| CR539_RS27365 () | 6692..8650 | + | 1959 | WP_158302284.1 | ParB/RepB/Spo0J family partition protein | - |
| CR539_RS27370 () | 8705..9139 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| CR539_RS27375 () | 9136..9855 | + | 720 | WP_089563323.1 | plasmid SOS inhibition protein A | - |
| CR539_RS27380 () | 9852..10448 | + | 597 | WP_089563322.1 | hypothetical protein | - |
| CR539_RS27390 () | 10910..11410 | + | 501 | WP_000117624.1 | antirestriction protein ArdA | - |
| CR539_RS27400 () | 12143..12577 | + | 435 | WP_000218864.1 | hypothetical protein | - |
| CR539_RS27405 () | 12670..12936 | + | 267 | WP_042199284.1 | hypothetical protein | - |
| CR539_RS27410 () | 13001..13951 | + | 951 | WP_101969599.1 | Recombination-promoting nuclease RpnA | VF |
| CR539_RS27415 () | 13951..14196 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| CR539_RS27420 () | 14227..14478 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| CR539_RS27425 () | 14512..14708 | - | 197 | Protein_22 | hypothetical protein | - |
| CR539_RS27430 () | 15057..15905 | + | 849 | WP_101969600.1 | DUF4942 domain-containing protein | - |
| CR539_RS27435 () | 15990..16325 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CR539_RS27440 () | 16556..16888 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| CR539_RS27445 () | 16900..19611 | + | 2712 | WP_000991387.1 | Protein TraI | Relaxase |
| CR539_RS27450 () | 19679..20110 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| CR539_RS27455 () | 20208..20438 | - | 231 | WP_065406859.1 | hypothetical protein | - |
| CR539_RS27465 () | 20905..23208 | - | 2304 | WP_000077664.1 | TraM recognition domain-containing protein | - |
| CR539_RS27470 () | 23189..24313 | - | 1125 | WP_000152382.1 | DsbC family protein | - |
| CR539_RS28165 () | 24310..25635 | - | 1326 | WP_024186660.1 | IncI1-type conjugal transfer protein TrbA | - |
| CR539_RS27480 () | 26276..26527 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| CR539_RS28350 () | 26590..26766 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| CR539_RS27485 () | 26916..27383 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| CR539_RS27490 () | 27542..28165 | + | 624 | WP_001155252.1 | DNA-binding protein | - |
| CR539_RS27500 () | 28363..28578 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| CR539_RS27505 () | 28582..28950 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| CR539_RS27515 () | 29241..29483 | - | 243 | WP_001401586.1 | hypothetical protein | - |
| CR539_RS27520 () | 29813..29965 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| CR539_RS27525 () | 30103..31689 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| CR539_RS27530 () | 31963..32610 | - | 648 | WP_015056434.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CR539_RS27535 () | 32698..34857 | - | 2160 | WP_101969601.1 | DotA/TraY family protein | - |
| CR539_RS27540 () | 34932..35501 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| CR539_RS27545 () | 35498..36703 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| CR539_RS27550 () | 36661..37281 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| CR539_RS27555 () | 37281..40325 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| CR539_RS27560 () | 40550..41095 | + | 546 | WP_001390888.1 | hypothetical protein | - |
| CR539_RS27565 () | 41068..41448 | - | 381 | WP_000690881.1 | hypothetical protein | - |
| CR539_RS27570 () | 41448..41807 | - | 360 | WP_000380400.1 | hypothetical protein | - |
| CR539_RS27575 () | 41862..42680 | - | 819 | WP_072107751.1 | conjugal transfer protein TraT | - |
| CR539_RS27580 () | 42595..42846 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| CR539_RS27585 () | 42903..43301 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| CR539_RS27590 () | 43348..43875 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| CR539_RS27595 () | 43875..44588 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| CR539_RS27600 () | 44585..45916 | - | 1332 | WP_001288252.1 | conjugal transfer protein TraO | - |
| CR539_RS27605 () | 45920..46894 | - | 975 | WP_101969602.1 | hypothetical protein | VF |
| CR539_RS27610 () | 46905..47600 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| CR539_RS27615 () | 47612..47962 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| CR539_RS27620 () | 47979..52040 | - | 4062 | WP_000842453.1 | DNA primase | - |
| CR539_RS27625 () | 52104..52394 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| CR539_RS27630 () | 52391..53539 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| CR539_RS27635 () | 53523..54359 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| CR539_RS27640 () | 54356..54814 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| CR539_RS27645 () | 54918..56120 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| CR539_RS27650 () | 56222..57043 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| CR539_RS27660 () | 57516..58877 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| CR539_RS27665 () | 58895..59521 | - | 627 | WP_044789628.1 | prepilin peptidase | - |
| CR539_RS27670 () | 59537..60022 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| CR539_RS27675 () | 60067..60603 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| CR539_RS27680 () | 60665..61759 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| CR539_RS27685 () | 61761..63269 | - | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CR539_RS27690 () | 63372..63830 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| CR539_RS27695 () | 63820..65115 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| CR539_RS27700 () | 65136..66755 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| CR539_RS27705 () | 66787..67224 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| CR539_RS27710 () | 67228..68298 | - | 1071 | WP_101969603.1 | hypothetical protein | VF |
| CR539_RS27715 () | 68525..68860 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| CR539_RS27720 () | 68976..69293 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| CR539_RS27725 () | 69299..70993 | - | 1695 | WP_000482667.1 | flotillin family protein | - |
| CR539_RS27730 () | 71020..71640 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| CR539_RS27740 () | 71907..72572 | - | 666 | WP_101969604.1 | traC | - |
| CR539_RS27745 () | 72713..73354 | - | 642 | WP_000335849.1 | transcription termination factor NusG | - |
| CR539_RS27755 () | 74056..74928 | + | 873 | WP_062860909.1 | incFII family plasmid replication initiator RepA | - |
| CR539_RS27775 () | 75831..76115 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CR539_RS27780 () | 76115..76390 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR539_RS27785 () | 76498..77195 | - | 698 | Protein_86 | IS1 family transposase IS1R | Transposase |
| CR539_RS27795 () | 77273..77554 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| CR539_RS27805 () | 77745..78011 | - | 267 | WP_016237857.1 | hypothetical protein | - |
| CR539_RS27810 () | 78149..78751 | - | 603 | WP_000517694.1 | hypothetical protein | - |
| CR539_RS27820 () | 79105..80451 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| CR539_RS28355 () | 80978..81280 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CR539_RS27835 () | 81277..81903 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CR539_RS27840 () | 82123..83394 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| CR539_RS27845 () | 83394..83831 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CR539_RS27850 () | 83828..84076 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|