MGE detailed information
MGE type: Mobilizable plasmid MGE length: 62585 bp
Accession: NZ_CP024148 Location: 1..62585 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033a
Accession: NZ_CP024148 Location: 1..62585 Organism: Escherichia coli strain 14EC033 Replicon: plasmid p14EC033a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR539_RS24070 () | 14..1042 | - | 1029 | WP_001175213.1 | replication initiation protein | - |
| CR539_RS24075 () | 2128..2634 | + | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
| CR539_RS24080 () | 2627..2842 | + | 216 | WP_001127357.1 | DUF1187 family protein | - |
| CR539_RS28265 () | 2835..3011 | + | 177 | WP_000753050.1 | hypothetical protein | - |
| CR539_RS24085 () | 3038..3991 | + | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| CR539_RS24095 () | 4371..4814 | + | 444 | WP_022645140.1 | NfeD family protein | - |
| CR539_RS24100 () | 4999..5652 | + | 654 | WP_053899054.1 | hypothetical protein | - |
| CR539_RS24105 () | 5686..5943 | + | 258 | WP_001542015.1 | hypothetical protein | - |
| CR539_RS24110 () | 5924..6226 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| CR539_RS24115 () | 6223..6480 | + | 258 | WP_000739144.1 | hypothetical protein | - |
| CR539_RS24120 () | 6484..7479 | + | 996 | WP_001028540.1 | hypothetical protein | VF |
| CR539_RS24125 () | 7485..8129 | + | 645 | WP_001310442.1 | hypothetical protein | VF |
| CR539_RS24130 () | 8138..8362 | + | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| CR539_RS24135 () | 8585..9394 | - | 810 | WP_024237698.1 | hypothetical protein | - |
| CR539_RS24140 () | 9442..9741 | + | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| CR539_RS24145 () | 9744..10979 | + | 1236 | WP_053899060.1 | hypothetical protein | VF |
| CR539_RS24150 () | 10985..11422 | + | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| CR539_RS24155 () | 11541..11939 | + | 399 | WP_001153669.1 | hypothetical protein | - |
| CR539_RS24160 () | 11960..12544 | + | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| CR539_RS24165 () | 12646..12834 | + | 189 | WP_050567133.1 | hypothetical protein | - |
| CR539_RS24170 () | 12905..13225 | + | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| CR539_RS24175 () | 13231..15588 | + | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| CR539_RS24185 () | 15754..16488 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| CR539_RS24190 () | 16554..17255 | + | 702 | WP_049824867.1 | Type IV secretion system protein PtlF | VF |
| CR539_RS24195 () | 17245..18384 | + | 1140 | WP_001542008.1 | Type IV secretion system protein virB10 | VF |
| CR539_RS24200 () | 18403..19458 | + | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| CR539_RS24205 () | 19474..21432 | + | 1959 | WP_000338976.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CR539_RS24210 () | 21479..22015 | + | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| CR539_RS24215 () | 22008..23651 | + | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| CR539_RS24220 () | 23690..25012 | + | 1323 | WP_000454143.1 | type 4b pilus protein PilO2 | - |
| CR539_RS24225 () | 24996..25490 | + | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| CR539_RS24230 () | 25515..27053 | + | 1539 | WP_001420475.1 | Type II secretion system protein E | VF |
| CR539_RS24235 () | 27044..28153 | + | 1110 | WP_000974900.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CR539_RS24240 () | 28198..28755 | + | 558 | WP_000095051.1 | hypothetical protein | - |
| CR539_RS24245 () | 28822..29304 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| CR539_RS24250 () | 29308..29943 | + | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CR539_RS24255 () | 29956..31242 | + | 1287 | WP_015057162.1 | hypothetical protein | VF |
| CR539_RS28270 () | 32069..32278 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| CR539_RS24305 () | 33769..34893 | + | 1125 | WP_000486716.1 | site-specific integrase | - |
| CR539_RS24310 () | 34905..35558 | + | 654 | WP_170855322.1 | hypothetical protein | - |
| CR539_RS24315 () | 35605..36120 | + | 516 | WP_000698398.1 | thermonuclease family protein | - |
| CR539_RS24320 () | 36215..37891 | + | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| CR539_RS24325 () | 38061..38636 | + | 576 | WP_001303470.1 | hypothetical protein | - |
| CR539_RS24330 () | 38641..40806 | + | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| CR539_RS24335 () | 40875..41081 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| CR539_RS28095 () | 41427..41867 | + | 441 | WP_000666084.1 | hypothetical protein | - |
| CR539_RS24345 () | 41892..42545 | + | 654 | WP_101969572.1 | phosphatase PAP2 family protein | - |
| CR539_RS24350 () | 42669..44294 | - | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| CR539_RS24355 () | 44424..45404 | + | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| CR539_RS24365 () | 45715..50028 | - | 4314 | WP_034169409.1 | hypothetical protein | - |
| CR539_RS24370 () | 50025..50366 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| CR539_RS24375 () | 50734..51135 | + | 402 | WP_021575837.1 | hypothetical protein | - |
| CR539_RS24380 () | 51153..51905 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| CR539_RS24385 () | 51907..52614 | + | 708 | WP_021503228.1 | hypothetical protein | - |
| CR539_RS24390 () | 52634..52960 | + | 327 | WP_063078684.1 | hypothetical protein | - |
| CR539_RS24395 () | 53091..53528 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CR539_RS24400 () | 53553..53735 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| CR539_RS24405 () | 54293..54475 | + | 183 | WP_001481829.1 | hypothetical protein | - |
| CR539_RS24410 () | 54582..54848 | - | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| CR539_RS24415 () | 55268..55546 | - | 279 | WP_000545938.1 | hypothetical protein | - |
| CR539_RS24430 () | 56096..56347 | - | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| CR539_RS24435 () | 56337..56597 | - | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| CR539_RS24440 () | 56649..56873 | - | 225 | WP_000814381.1 | hypothetical protein | - |
| CR539_RS24445 () | 56970..57179 | - | 210 | WP_000866036.1 | hypothetical protein | - |
| CR539_RS24450 () | 57221..57544 | - | 324 | WP_000427403.1 | hypothetical protein | - |
| CR539_RS24460 () | 58126..58455 | - | 330 | WP_000855120.1 | hypothetical protein | - |
| CR539_RS24470 () | 59052..59717 | + | 666 | WP_000532148.1 | P-loop NTPase | - |
| CR539_RS28275 () | 59791..60075 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| CR539_RS24480 () | 60093..60689 | - | 597 | WP_000125165.1 | hypothetical protein | - |
| CR539_RS24485 () | 60839..61000 | - | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|