MGE detailed information
MGE type: Prophage MGE length: 32900 bp
Accession: NZ_CP024147 Location: 1047865..1080764 Organism: Escherichia coli strain 14EC033 Replicon: chromosome
Accession: NZ_CP024147 Location: 1047865..1080764 Organism: Escherichia coli strain 14EC033 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR539_RS05325 () | 1043020..1043298 | - | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| CR539_RS05330 () | 1043301..1043561 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| CR539_RS05335 () | 1043747..1044520 | + | 774 | WP_122999019.1 | C40 family peptidase | - |
| CR539_RS05340 () | 1044696..1045193 | + | 498 | WP_032280308.1 | transposase | - |
| CR539_RS05345 () | 1045325..1047037 | - | 1713 | Protein_952 | flagellar biosynthesis protein FlhA | - |
| CR539_RS05350 () | 1047009..1047794 | + | 786 | WP_162721673.1 | putative lateral flagellar export/assembly protein LafU | - |
| CR539_RS05355 () | 1047865..1048920 | + | 1056 | WP_101969331.1 | DNA polymerase IV | - |
| CR539_RS05360 () | 1048972..1049265 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| CR539_RS05365 () | 1049268..1049666 | + | 399 | WP_032280310.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| CR539_RS05370 () | 1049676..1049933 | + | 258 | Protein_957 | GNAT family N-acetyltransferase | - |
| CR539_RS05375 () | 1049989..1050572 | + | 584 | Protein_958 | IS1 family transposase | - |
| CR539_RS05385 () | 1050605..1051818 | + | 1214 | WP_089602041.1 | IS3 family transposase ISEc31 | Transposase |
| CR539_RS28215 () | 1051825..1051947 | + | 123 | Protein_960 | IS1 family transposase | - |
| CR539_RS28220 () | 1051963..1052166 | + | 204 | Protein_961 | GNAT family N-acetyltransferase | - |
| CR539_RS05395 () | 1052484..1052692 | + | 209 | Protein_962 | RtcB family protein | - |
| CR539_RS05400 () | 1052712..1053020 | + | 309 | Protein_963 | peptide chain release factor H | - |
| CR539_RS05405 () | 1053077..1054534 | - | 1458 | WP_001293010.1 | cytosol nonspecific dipeptidase | - |
| CR539_RS05410 () | 1054795..1055253 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| CR539_RS05415 () | 1055345..1056589 | + | 1245 | WP_101969332.1 | esterase FrsA | - |
| - () | 1055849..1055929 | + | 81 | NuclAT_7 | - | - |
| - () | 1055849..1055929 | + | 81 | NuclAT_7 | - | - |
| - () | 1055849..1055929 | + | 81 | NuclAT_7 | - | - |
| - () | 1055849..1055929 | + | 81 | NuclAT_7 | - | - |
| CR539_RS05420 () | 1056647..1057048 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| CR539_RS05425 () | 1057087..1058142 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| CR539_RS05430 () | 1058430..1059533 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| CR539_RS05435 () | 1059545..1060798 | + | 1254 | WP_032280317.1 | glutamate-5-semialdehyde dehydrogenase | - |
| CR539_RS05450 () | 1062040..1062387 | - | 348 | WP_000390730.1 | helix-turn-helix domain-containing protein | - |
| CR539_RS05455 () | 1062456..1062734 | - | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| CR539_RS05460 () | 1062782..1063000 | - | 219 | WP_000763373.1 | TraR/DksA family transcriptional regulator | - |
| CR539_RS05465 () | 1063099..1063314 | - | 216 | WP_000188870.1 | hypothetical protein | - |
| CR539_RS05470 () | 1063391..1063948 | - | 558 | WP_101969334.1 | phage N-6-adenine-methyltransferase | - |
| CR539_RS05475 () | 1063941..1064105 | - | 165 | WP_097483192.1 | DUF1317 family protein | - |
| CR539_RS05480 () | 1064102..1064782 | - | 681 | WP_000186846.1 | YqaJ viral recombinase family protein | - |
| CR539_RS05485 () | 1064779..1065564 | - | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| CR539_RS05490 () | 1065570..1065866 | - | 297 | WP_001361467.1 | host-nuclease inhibitor protein Gam | - |
| CR539_RS05500 () | 1065942..1066148 | - | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| CR539_RS05505 () | 1066212..1066909 | - | 698 | Protein_981 | IS1 family transposase | - |
| CR539_RS05515 () | 1067023..1067331 | + | 309 | WP_074468307.1 | hypothetical protein | - |
| CR539_RS05520 () | 1067490..1067693 | + | 204 | WP_087898273.1 | hypothetical protein | - |
| CR539_RS05525 () | 1067779..1067880 | + | 102 | WP_077757380.1 | hypothetical protein | - |
| CR539_RS05530 () | 1067877..1068332 | + | 456 | WP_032280915.1 | YbcN family protein | - |
| CR539_RS05535 () | 1068332..1068502 | + | 171 | WP_000211034.1 | hypothetical protein | - |
| CR539_RS05540 () | 1068495..1068785 | + | 291 | WP_032280914.1 | DUF1364 domain-containing protein | - |
| CR539_RS05545 () | 1068782..1069144 | + | 363 | WP_032280913.1 | crossover junction endodeoxyribonuclease RusA | - |
| CR539_RS05550 () | 1069141..1069281 | + | 141 | WP_032280912.1 | YlcG family protein | - |
| CR539_RS05555 () | 1069367..1069744 | + | 378 | WP_001204777.1 | antitermination protein | - |
| CR539_RS05560 () | 1069900..1070424 | - | 525 | WP_000780582.1 | lipocalin family protein | - |
| CR539_RS05565 () | 1070617..1071576 | + | 960 | WP_000592547.1 | DUF523 and DUF1722 domain-containing protein | - |
| CR539_RS05570 () | 1071804..1072501 | - | 698 | Protein_993 | IS1 family transposase | - |
| CR539_RS05580 () | 1072705..1073436 | + | 732 | WP_001146308.1 | helix-turn-helix domain-containing protein | - |
| CR539_RS05590 () | 1073679..1074376 | + | 698 | Protein_995 | IS1 family transposase | - |
| CR539_RS05595 () | 1074687..1074877 | + | 191 | Protein_996 | hypothetical protein | - |
| CR539_RS05600 () | 1074947..1075087 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| CR539_RS05605 () | 1075087..1075350 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| CR539_RS05615 () | 1075714..1075815 | - | 102 | WP_000662258.1 | hypothetical protein | - |
| CR539_RS05620 () | 1076289..1077431 | - | 1143 | WP_101969335.1 | NADH-dependent flavin oxidoreductase | - |
| CR539_RS05625 () | 1077667..1078587 | - | 921 | WP_032280324.1 | alpha/beta hydrolase | - |
| CR539_RS05630 () | 1078744..1079670 | + | 927 | WP_032280325.1 | HTH-type transcriptional regulator PgrR | VF |
| CR539_RS05635 () | 1079871..1080764 | + | 894 | WP_032280326.1 | HTH-type transcriptional regulator PgrR | VF |
| CR539_RS05640 () | 1080796..1081785 | - | 990 | WP_032280327.1 | aldo/keto reductase | - |
| CR539_RS05645 () | 1081812..1082663 | - | 852 | WP_101969336.1 | aldo/keto reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|