MGE detailed information
MGE type: Genomic_island MGE length: 26720 bp
Accession: NZ_CP024141 Location: 4265863..4292582 Organism: Escherichia coli strain 14EC029 Replicon: chromosome
Accession: NZ_CP024141 Location: 4265863..4292582 Organism: Escherichia coli strain 14EC029 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR538_RS22140 () | 4261342..4261845 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| CR538_RS22145 () | 4261858..4262388 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| CR538_RS22150 () | 4262398..4265034 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| CR538_RS22155 () | 4265101..4265826 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| CR538_RS22160 () | 4265863..4266402 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| CR538_RS22165 () | 4266467..4267015 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| CR538_RS22175 () | 4267498..4268094 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| CR538_RS22180 () | 4268572..4269174 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| CR538_RS22195 () | 4270630..4271346 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| CR538_RS22200 () | 4271366..4272472 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| CR538_RS22205 () | 4272537..4273517 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| CR538_RS22210 () | 4274100..4275340 | - | 1241 | Protein_4058 | helicase YjhR | - |
| CR538_RS22220 () | 4275456..4275701 | + | 246 | Protein_4059 | GNAT family N-acetyltransferase | - |
| CR538_RS22230 () | 4276078..4276335 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| CR538_RS22235 () | 4276347..4276892 | + | 546 | WP_101968878.1 | N-acetyltransferase | Antitoxin Detail |
| CR538_RS22240 () | 4276948..4277694 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| CR538_RS22245 () | 4277863..4278081 | + | 219 | Protein_4063 | hypothetical protein | - |
| CR538_RS30035 () | 4278119..4278235 | + | 117 | Protein_4064 | VOC family protein | - |
| CR538_RS22250 () | 4278480..4279601 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| CR538_RS22255 () | 4279598..4279876 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| CR538_RS22260 () | 4279888..4281201 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| CR538_RS22265 () | 4281214..4282017 | + | 804 | WP_101968879.1 | BtpA family protein SgcQ | - |
| CR538_RS22270 () | 4282151..4282582 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| CR538_RS22275 () | 4282594..4283226 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| CR538_RS22280 () | 4283243..4284025 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| CR538_RS22285 () | 4284328..4285116 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| CR538_RS22290 () | 4285121..4286026 | + | 906 | WP_001335841.1 | dihydrodipicolinate synthase family protein | - |
| CR538_RS22295 () | 4286037..4288004 | + | 1968 | WP_101968880.1 | xylonate dehydratase YjhG | - |
| CR538_RS22300 () | 4288111..4289460 | + | 1350 | WP_001128363.1 | GntP family permease | - |
| CR538_RS22310 () | 4289807..4290793 | + | 987 | WP_000373366.1 | sugar-binding transcriptional regulator | - |
| CR538_RS22315 () | 4290834..4291700 | - | 867 | WP_071590469.1 | multidrug DMT transporter permease | - |
| CR538_RS22320 () | 4291941..4292582 | - | 642 | WP_000439687.1 | L-fuculose-phosphate aldolase | - |
| CR538_RS22325 () | 4292613..4293728 | - | 1116 | WP_001022014.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| CR538_RS22330 () | 4293738..4294997 | - | 1260 | WP_000132327.1 | S-methyl-5-thioribose kinase | - |
| CR538_RS22335 () | 4295737..4295835 | - | 99 | Protein_4081 | toxin | - |
| CR538_RS22340 () | 4295925..4296293 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| CR538_RS22345 () | 4296456..4296677 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CR538_RS22350 () | 4296740..4297216 | - | 477 | WP_001186775.1 | RadC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|