MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 107279 bp
Accession: NZ_CP024137 Location: 1..107279 Organism: Escherichia coli strain 14EC017 Replicon: plasmid p14EC017c
Accession: NZ_CP024137 Location: 1..107279 Organism: Escherichia coli strain 14EC017 Replicon: plasmid p14EC017c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR536_RS28705 () | 107..337 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CR536_RS28710 () | 334..750 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CR536_RS28715 () | 825..2390 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| CR536_RS28720 () | 2375..3397 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| CR536_RS28725 () | 3422..4119 | - | 698 | Protein_4 | IS1 family transposase IS1S | Transposase |
| CR536_RS28735 () | 4175..4435 | - | 261 | Protein_5 | IS3 family transposase ISEc31 | Transposase |
| CR536_RS28740 () | 4637..5041 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| CR536_RS28745 () | 5038..5385 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| CR536_RS28750 () | 5434..6972 | + | 1539 | WP_000099202.1 | IS66 family transposase ISEc22 | Transposase |
| CR536_RS28755 () | 7207..11109 | - | 3903 | WP_134895005.1 | Serine protease EspP | VF |
| CR536_RS28760 () | 11736..12949 | + | 1214 | WP_162841971.1 | IS3 family transposase IS629 | Transposase |
| CR536_RS28770 () | 13403..14616 | - | 1214 | Protein_11 | IS3 family transposase IS629 | Transposase |
| CR536_RS28775 () | 14898..15185 | - | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR536_RS28780 () | 15182..15433 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CR536_RS28800 () | 16364..17577 | + | 1214 | WP_162829241.1 | IS3 family transposase IS629 | Transposase |
| CR536_RS28810 () | 18111..18326 | - | 216 | Protein_15 | IS3 family transposase IS1203 | Transposase |
| CR536_RS28815 () | 18401..18802 | - | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CR536_RS28820 () | 18896..19729 | - | 834 | WP_000088802.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CR536_RS28825 () | 19781..20296 | - | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| CR536_RS28830 () | 20283..21455 | - | 1173 | WP_071526091.1 | Type II secretion system protein L | VF |
| CR536_RS28835 () | 21494..22471 | - | 978 | WP_000842183.1 | Putative type II secretion system protein K | VF |
| CR536_RS28840 () | 22468..23067 | - | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| CR536_RS28845 () | 23064..23411 | - | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| CR536_RS28850 () | 23426..23977 | - | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| CR536_RS28855 () | 23974..24408 | - | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| CR536_RS28860 () | 24439..25662 | - | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| CR536_RS28865 () | 25664..27166 | - | 1503 | WP_001418198.1 | Type II secretion system protein E | VF |
| CR536_RS28870 () | 27163..29133 | - | 1971 | WP_013009342.1 | Type II secretion system protein D | VF |
| CR536_RS28875 () | 29134..30009 | - | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| CR536_RS28880 () | 30093..32753 | - | 2661 | WP_000770132.1 | Metalloprotease StcE | VF |
| CR536_RS29960 () | 33226..33711 | - | 486 | Protein_30 | IS3 family transposase IS3 | Transposase |
| CR536_RS28900 () | 35141..37351 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| CR536_RS28905 () | 37395..37784 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| CR536_RS28910 () | 37896..39109 | + | 1214 | WP_167586639.1 | IS3 family transposase IS629 | Transposase |
| CR536_RS28915 () | 39159..39656 | + | 498 | WP_001340790.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| CR536_RS28920 () | 39637..40344 | + | 708 | Protein_36 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| CR536_RS28925 () | 40430..41173 | + | 744 | Protein_37 | IS21 family transposase IS100kyp | Transposase |
| CR536_RS28930 () | 41310..41969 | + | 660 | Protein_38 | tyrosine-type recombinase/integrase | - |
| CR536_RS28935 () | 42652..43977 | + | 1326 | WP_024227774.1 | hypothetical protein | VF |
| CR536_RS28940 () | 44126..44409 | + | 284 | Protein_40 | YkgJ family cysteine cluster protein | - |
| CR536_RS28965 () | 47652..48473 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| CR536_RS28970 () | 48473..49579 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| CR536_RS28975 () | 49673..51394 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| CR536_RS28980 () | 51468..52466 | + | 999 | WP_077629919.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CR536_RS28985 () | 52558..52707 | + | 150 | Protein_46 | IS3 family transposase | - |
| CR536_RS28990 () | 52770..53246 | - | 477 | Protein_47 | IS66 family transposase ISEc8 | Transposase |
| CR536_RS28995 () | 53278..54890 | - | 1613 | Protein_48 | IS66 family transposase ISEc23 | Transposase |
| CR536_RS29000 () | 54921..55271 | - | 351 | WP_101979831.1 | IS66 family transposase ISEc23 | Transposase |
| CR536_RS29005 () | 55268..55693 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| CR536_RS29010 () | 55780..56847 | - | 1068 | Protein_51 | IS66 family transposase ISEc8 | Transposase |
| CR536_RS29015 () | 56897..57244 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CR536_RS29020 () | 57241..57642 | - | 402 | WP_000536902.1 | IS66 family transposase ISEc8 | Transposase |
| CR536_RS29025 () | 57771..58331 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| CR536_RS29030 () | 58434..59294 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| CR536_RS29035 () | 59353..60099 | - | 747 | WP_000205715.1 | conjugal transfer pilus acetylase TraX | - |
| CR536_RS29040 () | 60119..65389 | - | 5271 | WP_101979833.1 | Multifunctional conjugation protein TraI | Relaxase |
| CR536_RS29045 () | 65389..67668 | - | 2280 | WP_101979834.1 | Coupling protein TraD | VF |
| CR536_RS29050 () | 67922..68653 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CR536_RS29055 () | 68667..69083 | - | 417 | Protein_60 | conjugal transfer entry exclusion protein TraS | - |
| CR536_RS29060 () | 69098..69795 | - | 698 | Protein_61 | IS1 family transposase IS1G | Transposase |
| CR536_RS29070 () | 69849..70181 | - | 333 | Protein_62 | hypothetical protein | - |
| CR536_RS29965 () | 70250..70588 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| CR536_RS29090 () | 72756..73727 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CR536_RS29095 () | 73727..74893 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| CR536_RS29100 () | 75193..75890 | - | 698 | Protein_67 | IS1 family transposase IS1G | Transposase |
| CR536_RS29110 () | 76046..77548 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| CR536_RS29115 () | 78175..78624 | - | 450 | WP_000238252.1 | hypothetical protein | - |
| CR536_RS29120 () | 78742..79221 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| CR536_RS29130 () | 79661..79888 | + | 228 | Protein_71 | malate dehydrogenase | - |
| CR536_RS29135 () | 79885..80016 | - | 132 | Protein_72 | phosphopyruvate hydratase | - |
| CR536_RS29140 () | 80014..80271 | + | 258 | Protein_73 | Tn3 family transposase | - |
| CR536_RS29145 () | 80505..81362 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| CR536_RS29150 () | 81359..82216 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| CR536_RS29155 () | 82213..83040 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| CR536_RS29160 () | 83040..83954 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| CR536_RS29175 () | 84310..85007 | + | 698 | Protein_78 | IS1 family transposase IS1S | Transposase |
| CR536_RS29180 () | 85187..85700 | - | 514 | Protein_79 | DUF4113 domain-containing protein | - |
| CR536_RS29970 () | 85761..85865 | - | 105 | Protein_80 | AAA family ATPase | - |
| CR536_RS29190 () | 85867..86190 | - | 324 | Protein_81 | IS21 family transposase IS21 | Transposase |
| CR536_RS29200 () | 86936..87913 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| CR536_RS29205 () | 88198..88938 | - | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| CR536_RS29210 () | 89062..89247 | - | 186 | Protein_84 | hypothetical protein | - |
| CR536_RS29215 () | 89621..90523 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| CR536_RS29220 () | 90592..91701 | - | 1110 | WP_096896842.1 | SDR family oxidoreductase | - |
| CR536_RS29230 () | 92134..93087 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| CR536_RS29235 () | 93191..93580 | + | 390 | WP_001332050.1 | outer membrane protease | - |
| CR536_RS29245 () | 94360..94518 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| CR536_RS29255 () | 94616..95313 | + | 698 | Protein_90 | IS1 family transposase IS1G | Transposase |
| CR536_RS29270 () | 96704..97507 | + | 804 | Protein_92 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| CR536_RS29275 () | 97482..99596 | + | 2115 | WP_109045958.1 | peptidase domain-containing ABC transporter | - |
| CR536_RS29280 () | 99766..100077 | - | 312 | WP_001259758.1 | colicin V | - |
| CR536_RS29795 () | 100055..100291 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| CR536_RS29290 () | 100447..101559 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CR536_RS29295 () | 102105..102386 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| CR536_RS29300 () | 102559..102726 | + | 168 | Protein_98 | colicin-B | - |
| CR536_RS29305 () | 102744..103271 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| CR536_RS29315 () | 103515..104330 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| CR536_RS29320 () | 104380..104733 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| CR536_RS29325 () | 104911..105702 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| CR536_RS29330 () | 105699..106388 | - | 690 | WP_089583722.1 | hypothetical protein | - |
| CR536_RS29335 () | 106432..106782 | - | 351 | WP_000493379.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|