MGE detailed information
MGE type: Prophage MGE length: 51992 bp
Accession: NZ_CP024134 Location: 2378339..2430330 Organism: Escherichia coli strain 14EC017 Replicon: chromosome
Accession: NZ_CP024134 Location: 2378339..2430330 Organism: Escherichia coli strain 14EC017 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR536_RS12635 () | 2373720..2374430 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| CR536_RS12640 () | 2374433..2374993 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CR536_RS12645 () | 2375028..2375369 | - | 342 | WP_101979690.1 | DUF1283 family protein | - |
| CR536_RS12650 () | 2375504..2375830 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| CR536_RS12660 () | 2376036..2377250 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CR536_RS12665 () | 2377262..2378281 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| CR536_RS12675 () | 2378469..2379749 | - | 1281 | WP_000877005.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CR536_RS12680 () | 2379784..2380035 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CR536_RS12685 () | 2380108..2381253 | - | 1146 | Protein_2303 | 3'-5' exoribonuclease | - |
| CR536_RS12695 () | 2381309..2382006 | + | 698 | Protein_2304 | IS1 family transposase IS1G | Transposase |
| CR536_RS12710 () | 2382680..2383993 | + | 1314 | WP_000589009.1 | ISNCY family transposase ISCARN112 | Transposase |
| CR536_RS12720 () | 2384430..2384762 | - | 333 | WP_001301033.1 | protein FlxA | - |
| CR536_RS12725 () | 2384965..2385270 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| CR536_RS12730 () | 2385295..2385534 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CR536_RS12735 () | 2385534..2385821 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CR536_RS12740 () | 2385893..2386048 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CR536_RS12745 () | 2386265..2386516 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| CR536_RS12750 () | 2386583..2386861 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| CR536_RS12755 () | 2386863..2387912 | + | 1050 | WP_096174476.1 | DUF968 domain-containing protein | - |
| CR536_RS12760 () | 2387926..2388678 | + | 753 | WP_001047136.1 | antitermination protein | - |
| CR536_RS29505 () | 2388956..2389045 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| CR536_RS12765 () | 2389100..2389312 | - | 213 | WP_000087757.1 | cold shock-like protein CspF | - |
| CR536_RS12770 () | 2389613..2389828 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CR536_RS30040 () | 2390192..2390362 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| CR536_RS12780 () | 2390582..2390797 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CR536_RS12785 () | 2390802..2391113 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| CR536_RS12790 () | 2391110..2391643 | + | 534 | WP_001092971.1 | lysozyme | - |
| CR536_RS12795 () | 2391640..2392137 | + | 498 | WP_001071766.1 | DUF2514 domain-containing protein | - |
| CR536_RS12805 () | 2392501..2392713 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CR536_RS12810 () | 2392724..2392912 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| CR536_RS29510 () | 2392915..2392980 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| CR536_RS29515 () | 2393060..2393215 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| CR536_RS12820 () | 2393387..2393566 | + | 180 | WP_053902974.1 | addiction module toxin, GnsA/GnsB family | - |
| CR536_RS12825 () | 2393718..2394128 | - | 411 | WP_096174444.1 | DUF1398 domain-containing protein | - |
| CR536_RS12830 () | 2394186..2394419 | - | 234 | WP_097747513.1 | YlcI/YnfO family protein | - |
| CR536_RS12840 () | 2394808..2395353 | + | 546 | WP_000453603.1 | DNA-packaging protein | - |
| CR536_RS12845 () | 2395328..2397253 | + | 1926 | WP_001549229.1 | phage terminase large subunit family protein | - |
| CR536_RS12850 () | 2397250..2397456 | + | 207 | WP_000198149.1 | gpW family protein | - |
| CR536_RS12855 () | 2397453..2399054 | + | 1602 | WP_001324962.1 | phage portal protein | - |
| CR536_RS12860 () | 2399035..2400354 | + | 1320 | WP_000123333.1 | S49 family peptidase | - |
| CR536_RS12865 () | 2400364..2400696 | + | 333 | WP_001549228.1 | head decoration protein | - |
| CR536_RS12870 () | 2400752..2401777 | + | 1026 | WP_001552792.1 | major capsid protein | - |
| CR536_RS12875 () | 2401819..2402214 | + | 396 | WP_000158895.1 | DNA-packaging protein FI | - |
| CR536_RS12880 () | 2402226..2402579 | + | 354 | WP_000752960.1 | head-tail joining protein | - |
| CR536_RS12885 () | 2402591..2403169 | + | 579 | WP_000985123.1 | phage tail protein | - |
| CR536_RS12890 () | 2403166..2403561 | + | 396 | WP_000683143.1 | phage minor tail U family protein | - |
| CR536_RS12895 () | 2403569..2404309 | + | 741 | WP_001439072.1 | phage tail protein | - |
| CR536_RS12900 () | 2404325..2404747 | + | 423 | WP_033803353.1 | phage minor tail protein G | - |
| CR536_RS12905 () | 2404729..2405163 | + | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| CR536_RS12910 () | 2405156..2407735 | + | 2580 | WP_101979691.1 | phage tail tape measure protein | - |
| CR536_RS12915 () | 2407732..2408061 | + | 330 | WP_000847345.1 | phage tail protein | - |
| CR536_RS12920 () | 2408061..2408759 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| CR536_RS12925 () | 2408765..2409508 | + | 744 | WP_032143059.1 | C40 family peptidase | - |
| CR536_RS12930 () | 2409445..2410047 | + | 603 | WP_000090905.1 | tail assembly protein | - |
| CR536_RS12935 () | 2410108..2413587 | + | 3480 | WP_101979692.1 | host specificity protein J | - |
| CR536_RS12940 () | 2413656..2414255 | + | 600 | WP_001619470.1 | Outer membrane protein X | VF |
| CR536_RS12945 () | 2414320..2417427 | + | 3108 | WP_077890157.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CR536_RS12950 () | 2417427..2418002 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| CR536_RS12955 () | 2418100..2418690 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CR536_RS12960 () | 2419007..2419240 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CR536_RS29520 () | 2419309..2419422 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CR536_RS12970 () | 2420025..2421308 | + | 1284 | Protein_2356 | MHS family MFS transporter YdfJ | - |
| CR536_RS12975 () | 2421397..2422857 | + | 1461 | WP_000527813.1 | mannitol dehydrogenase family protein | - |
| CR536_RS12980 () | 2422893..2423096 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CR536_RS12990 () | 2423413..2424523 | - | 1111 | Protein_2359 | IS4 family transposase IS186B | Transposase |
| CR536_RS12995 () | 2424620..2425306 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CR536_RS13000 () | 2425395..2426141 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| CR536_RS13010 () | 2426278..2428323 | + | 2046 | WP_001459755.1 | peptidyl-dipeptidase Dcp | - |
| CR536_RS13020 () | 2428368..2428886 | - | 519 | WP_001024745.1 | 2-oxo-tetronate isomerase | - |
| CR536_RS13030 () | 2429215..2429912 | + | 698 | Protein_2364 | IS1 family transposase IS1G | Transposase |
| CR536_RS13035 () | 2429938..2430330 | + | 393 | WP_000671735.1 | YdeI family stress tolerance OB fold protein | - |
| CR536_RS13040 () | 2430585..2431475 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| CR536_RS30045 () | 2431590..2431694 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CR536_RS13045 () | 2431694..2431789 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CR536_RS13055 () | 2431925..2432622 | + | 698 | Protein_2369 | IS1 family transposase | - |
| CR536_RS13060 () | 2432693..2433880 | - | 1188 | WP_001054152.1 | efflux MFS transporter YdeE | - |
| CR536_RS13065 () | 2434075..2434974 | + | 900 | WP_101979693.1 | O-acetylserine/cysteine exporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|