MGE detailed information
MGE type: Prophage MGE length: 71832 bp
Accession: NZ_CP024131 Location: 2379753..2451584 Organism: Escherichia coli strain 14EC007 Replicon: chromosome
Accession: NZ_CP024131 Location: 2379753..2451584 Organism: Escherichia coli strain 14EC007 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR535_RS12630 () | 2376097..2378428 | - | 2332 | Protein_2292 | dimethyl sulfoxide reductase subunit A | - |
| CR535_RS12635 () | 2378627..2378932 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| CR535_RS12640 () | 2379040..2379750 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| CR535_RS12645 () | 2379753..2380313 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CR535_RS12650 () | 2380348..2380689 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| CR535_RS12655 () | 2380824..2381150 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| CR535_RS12665 () | 2381356..2382570 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CR535_RS12670 () | 2382582..2383601 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| CR535_RS12680 () | 2383789..2385069 | - | 1281 | WP_000876979.1 | Paraquat-inducible protein B ; Integrase | Integrase |
| CR535_RS12685 () | 2385104..2385355 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CR535_RS12690 () | 2385428..2387899 | - | 2472 | WP_101972890.1 | exonuclease | - |
| CR535_RS12695 () | 2387993..2388184 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| CR535_RS12700 () | 2388181..2388369 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CR535_RS12710 () | 2388937..2389155 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| CR535_RS12720 () | 2389315..2389470 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| CR535_RS12725 () | 2389639..2390046 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| CR535_RS12730 () | 2390128..2390353 | + | 226 | Protein_2308 | transcriptional regulator | - |
| CR535_RS12735 () | 2390337..2390858 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| CR535_RS12740 () | 2390839..2391808 | + | 970 | Protein_2310 | hypothetical protein | - |
| CR535_RS12745 () | 2391849..2392271 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| CR535_RS12750 () | 2392268..2392642 | + | 375 | WP_101972891.1 | class I SAM-dependent methyltransferase | - |
| CR535_RS12755 () | 2392668..2393881 | + | 1214 | WP_162829241.1 | IS3 family transposase IS629 | Transposase |
| CR535_RS28965 () | 2394548..2394877 | + | 330 | Protein_2314 | hypothetical protein | - |
| CR535_RS12770 () | 2395604..2396917 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CR535_RS12780 () | 2397354..2397518 | - | 165 | WP_101972892.1 | protein FlxA | - |
| CR535_RS12785 () | 2397562..2397942 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CR535_RS12790 () | 2397939..2398286 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CR535_RS12795 () | 2398336..2399874 | + | 1539 | WP_053888474.1 | IS66 family transposase ISEc8 | Transposase |
| CR535_RS12800 () | 2399912..2400136 | - | 225 | Protein_2320 | FlxA-like family protein | - |
| CR535_RS12805 () | 2400339..2400644 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| CR535_RS12810 () | 2400669..2400908 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CR535_RS12815 () | 2400908..2401195 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CR535_RS12820 () | 2401267..2401422 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CR535_RS12825 () | 2401639..2401890 | + | 252 | WP_099949844.1 | hypothetical protein | - |
| CR535_RS12830 () | 2401957..2402235 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| CR535_RS12835 () | 2402237..2403286 | + | 1050 | WP_099949845.1 | DUF968 domain-containing protein | - |
| CR535_RS12840 () | 2403300..2404052 | + | 753 | WP_101972893.1 | antitermination protein | - |
| CR535_RS28705 () | 2404330..2404419 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| CR535_RS12845 () | 2404474..2404686 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CR535_RS12850 () | 2404987..2405202 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CR535_RS29130 () | 2405566..2405736 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CR535_RS12855 () | 2405956..2406171 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CR535_RS12860 () | 2406176..2406487 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| CR535_RS28710 () | 2406484..2406600 | + | 117 | Protein_2335 | lysozyme | - |
| CR535_RS12875 () | 2407917..2408330 | + | 414 | Protein_2337 | lysozyme | - |
| CR535_RS12880 () | 2408327..2408824 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CR535_RS12885 () | 2409186..2409398 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CR535_RS12890 () | 2409409..2409597 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| CR535_RS28715 () | 2409600..2409665 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| CR535_RS28720 () | 2409745..2409900 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| CR535_RS12900 () | 2410072..2410245 | + | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| CR535_RS12905 () | 2410397..2410828 | - | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| CR535_RS12915 () | 2411129..2411335 | + | 207 | WP_099949846.1 | hypothetical protein | - |
| CR535_RS12920 () | 2411888..2412427 | + | 540 | WP_000421825.1 | DUF1441 family protein | - |
| CR535_RS12925 () | 2412436..2414535 | + | 2100 | WP_101972895.1 | phage terminase large subunit family protein | - |
| CR535_RS12930 () | 2414532..2414744 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| CR535_RS12935 () | 2414744..2416252 | + | 1509 | WP_061342262.1 | phage portal protein | - |
| CR535_RS12940 () | 2416197..2418224 | + | 2028 | WP_101972896.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| CR535_RS12945 () | 2418311..2418634 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| CR535_RS12950 () | 2418627..2418902 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| CR535_RS12955 () | 2418914..2419492 | + | 579 | WP_000677106.1 | phage tail protein | - |
| CR535_RS12960 () | 2419489..2419890 | + | 402 | WP_001079418.1 | phage minor tail U family protein | - |
| CR535_RS12965 () | 2419901..2420644 | + | 744 | WP_000211124.1 | phage tail protein | - |
| CR535_RS12970 () | 2420705..2421091 | + | 387 | WP_101973063.1 | phage minor tail protein G | - |
| CR535_RS12975 () | 2421100..2421429 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| CR535_RS12980 () | 2421401..2424451 | + | 3051 | WP_101972897.1 | phage tail tape measure protein | - |
| CR535_RS12985 () | 2424451..2424780 | + | 330 | WP_000447253.1 | phage tail protein | - |
| CR535_RS12990 () | 2424790..2425488 | + | 699 | WP_001152388.1 | phage minor tail protein L | - |
| CR535_RS12995 () | 2425494..2426237 | + | 744 | WP_000140720.1 | C40 family peptidase | - |
| CR535_RS13000 () | 2426174..2426806 | + | 633 | WP_000090901.1 | tail assembly protein | - |
| CR535_RS13005 () | 2426867..2430169 | + | 3303 | WP_101972898.1 | host specificity protein J | - |
| CR535_RS13015 () | 2430220..2430917 | + | 698 | Protein_2364 | IS1 family transposase IS1R | Transposase |
| CR535_RS28725 () | 2430911..2431150 | - | 240 | WP_199560788.1 | hypothetical protein | - |
| CR535_RS13025 () | 2431128..2431727 | + | 600 | WP_053274246.1 | Uroporphyrinogen-III synthase | VF |
| CR535_RS13030 () | 2431792..2434815 | + | 3024 | WP_101972899.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CR535_RS13035 () | 2434815..2435390 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| CR535_RS13040 () | 2435488..2436078 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CR535_RS13045 () | 2436395..2436628 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CR535_RS28730 () | 2436697..2436810 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CR535_RS13050 () | 2437280..2438626 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| CR535_RS13055 () | 2438854..2440137 | + | 1284 | Protein_2373 | MHS family MFS transporter YdfJ | - |
| CR535_RS13060 () | 2440226..2441686 | + | 1461 | WP_000527813.1 | mannitol dehydrogenase family protein | - |
| CR535_RS13065 () | 2441722..2441925 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CR535_RS13070 () | 2442102..2442788 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CR535_RS13075 () | 2442877..2443623 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| CR535_RS13085 () | 2443760..2445805 | + | 2046 | WP_101973064.1 | peptidyl-dipeptidase Dcp | - |
| CR535_RS13095 () | 2445850..2446368 | - | 519 | WP_001024745.1 | 2-oxo-tetronate isomerase | - |
| CR535_RS13100 () | 2446643..2447035 | + | 393 | WP_000671735.1 | YdeI family stress tolerance OB fold protein | - |
| CR535_RS13105 () | 2447290..2448180 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| CR535_RS29135 () | 2448295..2448399 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CR535_RS13110 () | 2448399..2448494 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CR535_RS13115 () | 2448616..2449809 | - | 1194 | WP_101972901.1 | efflux MFS transporter YdeE | - |
| CR535_RS13120 () | 2450004..2450858 | + | 855 | WP_053887625.1 | O-acetylserine/cysteine exporter | - |
| CR535_RS13125 () | 2450887..2451584 | + | 698 | Protein_2386 | IS1 family transposase IS1A | Transposase |
| CR535_RS13130 () | 2451694..2453091 | + | 1398 | WP_064763375.1 | carbohydrate porin | - |
| CR535_RS13135 () | 2453116..2454555 | + | 1440 | WP_000012628.1 | 6-phospho-beta-glucosidase | - |
| CR535_RS13140 () | 2454612..2454830 | - | 219 | WP_000803532.1 | multiple antibiotic resistance protein MarB | - |
| CR535_RS13145 () | 2454862..2455245 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| CR535_RS13150 () | 2455265..2455699 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| CR535_RS13155 () | 2455911..2456576 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|