MGE detailed information
MGE type: Mobilizable plasmid MGE length: 88460 bp
Accession: NZ_CP024130 Location: 1..88460 Organism: Escherichia coli strain 14EC001 Replicon: plasmid p14EC001c
Accession: NZ_CP024130 Location: 1..88460 Organism: Escherichia coli strain 14EC001 Replicon: plasmid p14EC001c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR534_RS28210 () | 71..751 | + | 681 | WP_000697965.1 | Transcriptional regulatory protein CusR | VF |
| CR534_RS28215 () | 744..2219 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| CR534_RS28220 () | 2470..2901 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| CR534_RS28225 () | 3045..3395 | + | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| CR534_RS28230 () | 3783..4691 | - | 909 | WP_001372261.1 | HNH endonuclease | - |
| CR534_RS28235 () | 5329..6303 | + | 975 | WP_011251353.1 | sensor domain-containing diguanylate cyclase | - |
| CR534_RS29185 () | 7234..7905 | + | 672 | WP_000796235.1 | hypothetical protein | - |
| CR534_RS28250 () | 7925..8713 | + | 789 | WP_022631000.1 | site-specific integrase | - |
| CR534_RS28260 () | 9007..9903 | - | 897 | Protein_8 | IS3 family transposase ISEhe3 | Transposase |
| CR534_RS28265 () | 9913..11064 | - | 1152 | Protein_9 | IS30 family transposase IS30D | Transposase |
| CR534_RS28270 () | 11146..11295 | - | 150 | Protein_10 | IS3 family transposase ISEhe3 | Transposase |
| CR534_RS28275 () | 11442..11723 | + | 282 | WP_000639434.1 | hypothetical protein | - |
| CR534_RS28280 () | 11824..12522 | - | 699 | Protein_12 | IS1 family transposase IS1R | Transposase |
| CR534_RS28290 () | 12632..13957 | + | 1326 | WP_022631019.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| CR534_RS28300 () | 14164..14862 | + | 699 | Protein_14 | IS1 family transposase | - |
| CR534_RS28305 () | 14892..15239 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| CR534_RS28310 () | 15288..16825 | + | 1538 | Protein_16 | IS66 family transposase ISEc22 | Transposase |
| CR534_RS28330 () | 18768..19466 | + | 699 | Protein_17 | IS1 family transposase IS1R | Transposase |
| CR534_RS28335 () | 19485..20330 | + | 846 | Protein_18 | IS3 family transposase IS911 | Transposase |
| CR534_RS28345 () | 20739..21710 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| CR534_RS28350 () | 21710..22876 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
| CR534_RS28355 () | 23617..24627 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| CR534_RS28360 () | 24821..25003 | + | 183 | Protein_22 | IS5/IS1182 family transposase | - |
| CR534_RS28375 () | 26317..27102 | + | 786 | Protein_24 | IS5 family transposase IS903B | Transposase |
| CR534_RS28380 () | 27269..27685 | - | 417 | WP_033548869.1 | hypothetical protein | - |
| CR534_RS28385 () | 28270..28605 | + | 336 | WP_001039462.1 | hypothetical protein | - |
| CR534_RS28390 () | 28614..28805 | + | 192 | WP_001515192.1 | hypothetical protein | - |
| CR534_RS28395 () | 28816..29399 | - | 584 | Protein_28 | IS1 family transposase | - |
| CR534_RS28405 () | 29933..30688 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| CR534_RS28420 () | 30957..31302 | + | 346 | Protein_30 | IS1 family transposase | - |
| CR534_RS29440 () | 31813..31953 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| CR534_RS28440 () | 32026..32295 | + | 270 | WP_000079938.1 | hypothetical protein | - |
| CR534_RS28445 () | 32292..33002 | + | 711 | WP_201758353.1 | IS6 family transposase IS15DI | Transposase |
| CR534_RS28455 () | 33104..33583 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| CR534_RS28460 () | 33653..36805 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| CR534_RS28465 () | 36829..38004 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| CR534_RS28470 () | 38324..39028 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CR534_RS28480 () | 39222..39608 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| CR534_RS28485 () | 39893..40590 | - | 698 | Protein_39 | IS1 family transposase IS1R | Transposase |
| CR534_RS28495 () | 40705..41097 | - | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| CR534_RS28500 () | 41293..42147 | + | 855 | Protein_41 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| CR534_RS28505 () | 42179..42643 | - | 465 | Protein_42 | restriction endonuclease | - |
| CR534_RS28510 () | 42852..43163 | - | 312 | WP_001452736.1 | hypothetical protein | - |
| CR534_RS28515 () | 43199..43477 | - | 279 | WP_063107378.1 | IncN plasmid KikA protein | - |
| CR534_RS28520 () | 43536..44240 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CR534_RS28530 () | 44293..44541 | + | 249 | Protein_46 | EamA family transporter | - |
| CR534_RS28540 () | 44806..45441 | - | 636 | Protein_47 | IS256 family transposase IS406 | Transposase |
| CR534_RS29450 () | 45443..45718 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| CR534_RS28545 () | 45721..46512 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| CR534_RS28550 () | 46981..47226 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| CR534_RS28555 () | 47264..48127 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| CR534_RS28560 () | 48273..49502 | - | 1230 | WP_032492336.1 | Putative bacilysin exporter BacE | ARG |
| CR534_RS28570 () | 49952..50656 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CR534_RS28575 () | 50807..51622 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CR534_RS28580 () | 51812..52516 | - | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| CR534_RS28585 () | 52581..53831 | - | 1251 | Protein_56 | DDE-type integrase/transposase/recombinase | - |
| CR534_RS28595 () | 53906..54574 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| CR534_RS28600 () | 54610..54846 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| CR534_RS28605 () | 54843..55205 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| CR534_RS28610 () | 55223..56917 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| CR534_RS28615 () | 56969..57391 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| CR534_RS28620 () | 57427..57702 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| CR534_RS28625 () | 57716..58066 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| CR534_RS28630 () | 58138..58572 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| CR534_RS28635 () | 58619..59323 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CR534_RS28640 () | 59370..59642 | - | 273 | WP_061602529.1 | hypothetical protein | - |
| CR534_RS28650 () | 59938..60168 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CR534_RS28655 () | 60165..60581 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CR534_RS28660 () | 60743..62881 | - | 2139 | WP_101981714.1 | AAA family ATPase | - |
| CR534_RS28665 () | 63235..63492 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| CR534_RS28670 () | 63492..64082 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| CR534_RS28675 () | 64345..65901 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| CR534_RS28680 () | 66093..66710 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| CR534_RS28685 () | 67003..68136 | - | 1134 | WP_058650130.1 | permease | - |
| CR534_RS28690 () | 68242..68565 | + | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| CR534_RS28695 () | 68666..69376 | + | 711 | WP_057102336.1 | arsenical resistance protein ArsH | - |
| CR534_RS28700 () | 69452..71761 | - | 2310 | Protein_77 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| CR534_RS28705 () | 71815..72519 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CR534_RS28710 () | 72584..75241 | + | 2658 | Protein_79 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CR534_RS28715 () | 75303..76942 | - | 1640 | Protein_80 | copper resistance system multicopper oxidase | - |
| CR534_RS28720 () | 77177..77626 | + | 450 | WP_001023231.1 | hypothetical protein | - |
| CR534_RS28725 () | 77901..78638 | + | 738 | WP_000287499.1 | Murein DD-endopeptidase MepM | VF |
| CR534_RS28730 () | 78672..78869 | - | 198 | WP_000843501.1 | DUF2933 domain-containing protein | - |
| CR534_RS28735 () | 78910..81387 | - | 2478 | WP_011251358.1 | Ag(+)-translocating P-type ATPase SilP | - |
| CR534_RS28740 () | 81485..81925 | - | 441 | WP_000758221.1 | hypothetical protein | - |
| CR534_RS28745 () | 82012..85158 | - | 3147 | WP_011251357.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| CR534_RS28750 () | 85169..86461 | - | 1293 | WP_001398209.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| CR534_RS28755 () | 86575..86928 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| CR534_RS28760 () | 86956..88341 | - | 1386 | WP_063107410.1 | Cation efflux system protein CusC | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|