MGE detailed information
MGE type: Conjugative plasmid MGE length: 123884 bp
Accession: NZ_CP024129 Location: 1..123884 Organism: Escherichia coli strain 14EC001 Replicon: plasmid p14EC001b
Accession: NZ_CP024129 Location: 1..123884 Organism: Escherichia coli strain 14EC001 Replicon: plasmid p14EC001b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR534_RS27445 () | 81..1294 | + | 1214 | WP_162829241.1 | IS3 family transposase IS629 | Transposase |
| CR534_RS29395 () | 1332..1817 | + | 486 | Protein_2 | DDE-type integrase/transposase/recombinase | - |
| CR534_RS27460 () | 2325..4985 | + | 2661 | WP_000770132.1 | Metalloprotease StcE | VF |
| CR534_RS27465 () | 5069..5944 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| CR534_RS27470 () | 5945..7915 | + | 1971 | WP_013009342.1 | Type II secretion system protein D | VF |
| CR534_RS27475 () | 7912..9413 | + | 1502 | Protein_6 | Type II secretion system protein E | VF |
| CR534_RS27480 () | 9415..10638 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| CR534_RS27485 () | 10669..11103 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| CR534_RS27490 () | 11100..11651 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| CR534_RS27495 () | 11666..12013 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| CR534_RS27500 () | 12010..12609 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| CR534_RS27505 () | 12606..13582 | + | 977 | Protein_12 | Putative type II secretion system protein K | VF |
| CR534_RS27510 () | 13621..14793 | + | 1173 | WP_071526091.1 | Type II secretion system protein L | VF |
| CR534_RS27515 () | 14780..15295 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| CR534_RS27520 () | 15463..16179 | + | 717 | WP_101981710.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CR534_RS27525 () | 16273..16673 | + | 401 | Protein_16 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CR534_RS27530 () | 16748..16963 | + | 216 | Protein_17 | IS3 family transposase IS1203 | Transposase |
| CR534_RS29400 () | 17262..17555 | + | 294 | Protein_18 | hypothetical protein | - |
| CR534_RS27545 () | 17784..17909 | + | 126 | Protein_19 | replication protein | - |
| CR534_RS27550 () | 17953..19165 | - | 1213 | Protein_20 | IS3 family transposase IS629 | Transposase |
| CR534_RS27555 () | 19264..19665 | - | 402 | WP_101981702.1 | cytochrome b562 family protein | - |
| CR534_RS27560 () | 19709..21916 | - | 2208 | Protein_22 | catalase/peroxidase KatP | - |
| CR534_RS27570 () | 22095..23308 | + | 1214 | Protein_23 | IS3 family transposase | - |
| CR534_RS29405 () | 23346..23831 | + | 486 | Protein_24 | DDE-type integrase/transposase/recombinase | - |
| CR534_RS27580 () | 24278..26950 | + | 2673 | Protein_25 | peptidase M66 | - |
| CR534_RS27585 () | 27034..27912 | + | 879 | Protein_26 | type II secretion system protein GspC | - |
| CR534_RS27590 () | 27913..29885 | + | 1973 | Protein_27 | variant type II secretion system secretin EtpD | - |
| CR534_RS27595 () | 29882..31384 | + | 1503 | WP_001418198.1 | Type II secretion system protein E | VF |
| CR534_RS27600 () | 31386..32609 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| CR534_RS27605 () | 32640..33073 | + | 434 | Protein_30 | Type II secretion system protein G | VF |
| CR534_RS27610 () | 33070..33621 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| CR534_RS27615 () | 33636..33983 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| CR534_RS27620 () | 33980..34579 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| CR534_RS27625 () | 34576..35553 | + | 978 | WP_000842183.1 | Putative type II secretion system protein K | VF |
| CR534_RS27630 () | 35592..36766 | + | 1175 | Protein_35 | Type II secretion system protein L | VF |
| CR534_RS27635 () | 36753..37268 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| CR534_RS27640 () | 37437..38154 | + | 718 | Protein_37 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| CR534_RS27645 () | 38248..38649 | + | 402 | WP_001222320.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| CR534_RS27650 () | 38724..38939 | + | 216 | Protein_39 | IS3 family transposase IS1203 | Transposase |
| CR534_RS29410 () | 39238..39531 | + | 294 | Protein_40 | hypothetical protein | - |
| CR534_RS27665 () | 39760..39885 | + | 126 | Protein_41 | replication protein | - |
| CR534_RS27675 () | 41254..41643 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| CR534_RS27680 () | 41687..43897 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| CR534_RS27685 () | 44076..45289 | + | 1214 | WP_162829241.1 | IS3 family transposase IS629 | Transposase |
| CR534_RS27695 () | 45332..46397 | - | 1066 | Protein_46 | IS91 family transposase ISEc37 | Transposase |
| CR534_RS27700 () | 46397..46693 | - | 297 | WP_000766060.1 | hypothetical protein | - |
| CR534_RS27705 () | 47339..51241 | + | 3903 | WP_001045657.1 | Serine protease EspP | VF |
| CR534_RS27710 () | 51551..51811 | + | 261 | Protein_49 | IS3 family transposase | - |
| CR534_RS27715 () | 51803..52989 | - | 1187 | Protein_50 | IS3 family transposase IS629 | Transposase |
| CR534_RS27720 () | 53187..53474 | - | 288 | WP_101981705.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CR534_RS27730 () | 53547..54755 | + | 1209 | WP_101981706.1 | IS4 family transposase IS10R | Transposase |
| CR534_RS27735 () | 54771..54890 | - | 120 | Protein_53 | LysR family transcriptional regulator | - |
| CR534_RS27740 () | 55121..56326 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CR534_RS27745 () | 56770..57090 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CR534_RS27750 () | 57083..57469 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| CR534_RS27755 () | 57477..58163 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CR534_RS27760 () | 58141..58764 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CR534_RS27765 () | 58846..60051 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| CR534_RS27770 () | 60164..60757 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CR534_RS27775 () | 60890..61261 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| CR534_RS27780 () | 61271..62479 | - | 1209 | WP_099490915.1 | IS4 family transposase IS10R | Transposase |
| CR534_RS27790 () | 62632..62895 | - | 264 | WP_001089474.1 | hypothetical protein | - |
| CR534_RS29415 () | 63002..63226 | - | 225 | WP_101981707.1 | hypothetical protein | - |
| CR534_RS29420 () | 63954..64061 | - | 108 | Protein_65 | incFII family plasmid replication initiator RepA | - |
| CR534_RS27810 () | 64084..64209 | - | 126 | Protein_66 | replication protein | - |
| CR534_RS27815 () | 64263..65476 | + | 1214 | WP_167586639.1 | IS3 family transposase IS629 | Transposase |
| CR534_RS27830 () | 66933..67754 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| CR534_RS27835 () | 67754..68860 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| CR534_RS27840 () | 68954..70675 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| CR534_RS27845 () | 70749..71747 | + | 999 | WP_077629919.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CR534_RS27850 () | 71839..71988 | + | 150 | Protein_72 | IS3 family transposase | - |
| CR534_RS27855 () | 72051..73589 | - | 1539 | WP_078165746.1 | IS66 family transposase ISEc8 | Transposase |
| CR534_RS27860 () | 73639..73986 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CR534_RS27865 () | 73983..74384 | - | 402 | WP_000536902.1 | IS66 family transposase ISEc8 | Transposase |
| CR534_RS27870 () | 74513..75073 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| CR534_RS27875 () | 75176..76036 | - | 861 | WP_000704529.1 | putative protein YcjY | VF |
| CR534_RS27880 () | 76095..76841 | - | 747 | WP_000205715.1 | conjugal transfer pilus acetylase TraX | - |
| CR534_RS27885 () | 76861..82131 | - | 5271 | WP_096942428.1 | Multifunctional conjugation protein TraI | Relaxase |
| CR534_RS27890 () | 82131..84320 | - | 2190 | WP_001360340.1 | type IV conjugative transfer system coupling protein TraD | - |
| CR534_RS27895 () | 84574..85305 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CR534_RS27900 () | 85319..85828 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| CR534_RS27905 () | 85825..86151 | - | 327 | Protein_83 | conjugal transfer protein TraG | - |
| CR534_RS27915 () | 86206..86903 | + | 698 | Protein_84 | IS1 family transposase IS1S | Transposase |
| CR534_RS27920 () | 86918..87352 | - | 435 | Protein_85 | type IV conjugative transfer system protein TraE | - |
| CR534_RS27925 () | 87374..87685 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| CR534_RS27930 () | 87700..88065 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| CR534_RS27935 () | 88098..88493 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| CR534_RS27940 () | 88592..89281 | - | 690 | WP_000283379.1 | conjugal transfer transcriptional regulator TraJ | - |
| CR534_RS27945 () | 89468..89851 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| CR534_RS27950 () | 90172..90774 | + | 603 | WP_000243705.1 | hypothetical protein | VF |
| CR534_RS27955 () | 91071..91892 | - | 822 | WP_001241365.1 | DUF945 domain-containing protein | - |
| CR534_RS27960 () | 92012..92299 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| CR534_RS29425 () | 92324..92530 | - | 207 | WP_033804333.1 | hypothetical protein | - |
| CR534_RS29585 () | 92771..92926 | - | 156 | WP_213080977.1 | hypothetical protein | - |
| CR534_RS27980 () | 93221..93379 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 93423..93647 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93423..93647 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93423..93647 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 93423..93647 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| CR534_RS29175 () | 93459..93647 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| CR534_RS27985 () | 93659..94378 | - | 720 | WP_001276240.1 | plasmid SOS inhibition protein A | - |
| CR534_RS27990 () | 94375..94809 | - | 435 | WP_101981708.1 | conjugation system SOS inhibitor PsiB | - |
| CR534_RS27995 () | 94864..96822 | - | 1959 | WP_063072993.1 | ParB/RepB/Spo0J family partition protein | - |
| CR534_RS28000 () | 96887..97120 | - | 234 | WP_000006030.1 | DUF905 family protein | - |
| CR534_RS28005 () | 97182..97634 | - | 453 | WP_000290842.1 | single-stranded DNA-binding protein | - |
| CR534_RS28025 () | 98107..98364 | - | 258 | WP_072193410.1 | hypothetical protein | - |
| CR534_RS28030 () | 98516..99079 | - | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| CR534_RS28035 () | 99127..100488 | - | 1362 | WP_000170675.1 | DUF3560 domain-containing protein | - |
| CR534_RS28040 () | 100540..100770 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| CR534_RS28050 () | 101288..101536 | + | 249 | WP_077879799.1 | hypothetical protein | - |
| CR534_RS28055 () | 101808..101999 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| CR534_RS28060 () | 101996..102418 | - | 423 | WP_000271726.1 | DUF1380 family protein | - |
| CR534_RS28065 () | 102465..102767 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| CR534_RS28075 () | 103352..104464 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| CR534_RS28080 () | 104657..105427 | - | 771 | WP_001006221.1 | hypothetical protein | - |
| CR534_RS28085 () | 105472..105906 | - | 435 | WP_000274456.1 | DUF1380 family protein | - |
| CR534_RS28090 () | 105920..106141 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| CR534_RS28095 () | 106142..106825 | - | 684 | WP_000086184.1 | DNA methylase | - |
| CR534_RS28100 () | 106902..107213 | - | 312 | WP_199560417.1 | hypothetical protein | - |
| CR534_RS28105 () | 107210..108112 | - | 903 | WP_077629925.1 | DUF1281 domain-containing protein | - |
| CR534_RS28115 () | 108530..108778 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| CR534_RS28120 () | 108775..109212 | + | 438 | WP_000109069.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CR534_RS28125 () | 109212..110483 | + | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| CR534_RS28130 () | 110488..110880 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| CR534_RS28135 () | 110885..111856 | - | 972 | WP_001103690.1 | hypothetical protein | - |
| CR534_RS28140 () | 112085..112729 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| CR534_RS28145 () | 112723..112998 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| CR534_RS28150 () | 113136..113927 | - | 792 | WP_000016494.1 | site-specific integrase | - |
| CR534_RS28155 () | 113924..114613 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| CR534_RS28160 () | 114657..115007 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| CR534_RS28165 () | 115539..118418 | - | 2880 | WP_101981711.1 | hypothetical protein | - |
| CR534_RS28170 () | 118734..119030 | + | 297 | WP_000766060.1 | hypothetical protein | - |
| CR534_RS28175 () | 119030..120217 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| CR534_RS28180 () | 120410..120541 | + | 132 | Protein_131 | serine/threonine protein kinase | - |
| CR534_RS28185 () | 120665..121405 | + | 741 | WP_001066955.1 | tyrosine-type recombinase/integrase | - |
| CR534_RS28190 () | 121689..122666 | - | 978 | WP_097562352.1 | RepB family plasmid replication initiator protein | - |
| CR534_RS29435 () | 123448..123600 | - | 153 | Protein_134 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|