MGE detailed information
MGE type: Prophage MGE length: 26616 bp
Accession: NZ_CP024090 Location: 3559029..3585644 Organism: Escherichia coli strain WG5 Replicon: chromosome
Accession: NZ_CP024090 Location: 3559029..3585644 Organism: Escherichia coli strain WG5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSR56_RS18085 () | 3555301..3556257 | + | 957 | WP_000121328.1 | molybdenum cofactor insertion chaperone PaoD | - |
| CSR56_RS18090 () | 3556437..3557564 | - | 1128 | WP_047403032.1 | MFS transporter | - |
| CSR56_RS18095 () | 3557706..3558764 | - | 1059 | WP_122990176.1 | alpha/beta hydrolase | - |
| CSR56_RS18100 () | 3559029..3559913 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| CSR56_RS23570 () | 3560119..3560211 | + | 93 | Protein_3314 | hypothetical protein | - |
| CSR56_RS18110 () | 3560775..3561514 | + | 740 | Protein_3315 | IS3 family transposase IS629 | Transposase |
| CSR56_RS18120 () | 3562187..3563695 | + | 1509 | WP_032206693.1 | group II intron reverse transcriptase/maturase | - |
| CSR56_RS18125 () | 3563785..3564258 | + | 474 | Protein_3317 | IS3 family transposase IS629 | Transposase |
| CSR56_RS18130 () | 3564297..3564476 | - | 180 | Protein_3318 | hypothetical protein | - |
| CSR56_RS18135 () | 3564642..3565364 | - | 723 | WP_081508859.1 | putative oxidoreductase | VF |
| CSR56_RS18140 () | 3565463..3566362 | + | 900 | WP_000687182.1 | HTH-type transcriptional regulator PgrR | VF |
| CSR56_RS18150 () | 3566759..3567688 | - | 930 | WP_047085429.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| CSR56_RS18155 () | 3567675..3568457 | - | 783 | WP_172808160.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| CSR56_RS18160 () | 3568741..3570405 | + | 1665 | Protein_3323 | DEAD/DEAH box helicase family protein | - |
| CSR56_RS18165 () | 3570471..3571633 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| CSR56_RS18170 () | 3571663..3571998 | - | 336 | Protein_3325 | type III restriction endonuclease subunit R | - |
| CSR56_RS18175 () | 3572054..3572751 | + | 698 | Protein_3326 | IS1 family transposase IS1R | Transposase |
| CSR56_RS18185 () | 3572768..3572971 | - | 204 | Protein_3327 | DUF3987 domain-containing protein | - |
| CSR56_RS23810 () | 3573030..3573125 | + | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| CSR56_RS18190 () | 3573095..3574099 | + | 1005 | WP_001281825.1 | Ornithine carbamoyltransferase subunit F | VF |
| CSR56_RS18195 () | 3574238..3574996 | + | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| CSR56_RS18200 () | 3575001..3576611 | - | 1611 | WP_000406872.1 | glycoside hydrolase family 43 protein | - |
| CSR56_RS18205 () | 3576623..3578005 | - | 1383 | WP_000192863.1 | MFS transporter | - |
| CSR56_RS18210 () | 3578232..3580199 | - | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| CSR56_RS18215 () | 3580214..3581122 | - | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| CSR56_RS18220 () | 3581417..3582571 | + | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| CSR56_RS18230 () | 3582665..3583015 | + | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| CSR56_RS18235 () | 3583038..3583286 | + | 249 | Protein_3337 | IS3 family transposase ISEhe3 | Transposase |
| CSR56_RS18240 () | 3583296..3583469 | - | 174 | Protein_3338 | IS30 family transposase | - |
| CSR56_RS18250 () | 3583525..3584222 | + | 698 | Protein_3339 | IS1 family transposase IS1R | Transposase |
| CSR56_RS18260 () | 3584239..3584586 | + | 348 | Protein_3340 | ABC transporter permease subunit | - |
| CSR56_RS18265 () | 3584598..3585644 | + | 1047 | WP_000192349.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| CSR56_RS18270 () | 3585753..3586685 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| CSR56_RS18275 () | 3586672..3588075 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| CSR56_RS18280 () | 3588350..3589561 | - | 1212 | WP_000213416.1 | 3-(3-hydroxy-phenyl)propionate transporter MhpT | - |
| CSR56_RS18285 () | 3589631..3590644 | - | 1014 | WP_081508861.1 | 4-hydroxy-2-oxovalerate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Prophage | TA75075 | NZ_CP020543 | 3579364..3605979 | 0 |