MGE detailed information
MGE type: Prophage MGE length: 34242 bp
Accession: NZ_CP024090 Location: 2256756..2290997 Organism: Escherichia coli strain WG5 Replicon: chromosome
Accession: NZ_CP024090 Location: 2256756..2290997 Organism: Escherichia coli strain WG5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSR56_RS11440 () | 2253442..2255127 | - | 1686 | Protein_2095 | molybdopterin-dependent oxidoreductase | - |
| CSR56_RS11445 () | 2255119..2255667 | + | 549 | Protein_2096 | starvation-sensing protein RspA | - |
| CSR56_RS11450 () | 2255679..2256698 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CSR56_RS11460 () | 2256886..2258166 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CSR56_RS11465 () | 2258201..2258452 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| CSR56_RS11470 () | 2258525..2260996 | - | 2472 | WP_081508834.1 | exonuclease | - |
| CSR56_RS11475 () | 2261089..2261280 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| CSR56_RS11480 () | 2261277..2261465 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CSR56_RS11490 () | 2262033..2262251 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| CSR56_RS11500 () | 2262411..2262566 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CSR56_RS11505 () | 2262733..2263140 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| CSR56_RS11510 () | 2263224..2263454 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| CSR56_RS11515 () | 2263438..2263860 | + | 423 | Protein_2107 | toxin YdaT domain-containing protein | - |
| CSR56_RS23665 () | 2264078..2264365 | + | 288 | Protein_2108 | hypothetical protein | - |
| CSR56_RS11535 () | 2266359..2267672 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CSR56_RS11545 () | 2268109..2268441 | - | 333 | WP_001301033.1 | protein FlxA | - |
| CSR56_RS11550 () | 2268644..2268949 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| CSR56_RS11555 () | 2268974..2269213 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CSR56_RS11560 () | 2269213..2269500 | + | 288 | WP_047402633.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CSR56_RS11565 () | 2269572..2269727 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CSR56_RS11570 () | 2269944..2270195 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| CSR56_RS11575 () | 2270262..2270540 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| CSR56_RS11580 () | 2270542..2271591 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CSR56_RS11585 () | 2271605..2272357 | + | 753 | WP_001047135.1 | antitermination protein | - |
| CSR56_RS23455 () | 2272635..2272724 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| CSR56_RS11590 () | 2272779..2272991 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CSR56_RS11595 () | 2273292..2273507 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CSR56_RS23770 () | 2273871..2274041 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CSR56_RS11600 () | 2274261..2274476 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CSR56_RS11605 () | 2274481..2274792 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| CSR56_RS11610 () | 2274789..2275322 | + | 534 | WP_047402632.1 | lysozyme | - |
| CSR56_RS11615 () | 2275319..2275816 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CSR56_RS11620 () | 2276179..2276391 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CSR56_RS11625 () | 2276402..2276590 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| CSR56_RS23460 () | 2276593..2276658 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| CSR56_RS23465 () | 2276738..2276893 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| CSR56_RS11635 () | 2277065..2277238 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CSR56_RS11640 () | 2277390..2277800 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CSR56_RS11645 () | 2277858..2278031 | - | 174 | WP_001301001.1 | YlcI/YnfO family protein | - |
| CSR56_RS11650 () | 2278030..2278992 | + | 963 | WP_081508886.1 | phage tail protein | - |
| CSR56_RS11655 () | 2278992..2279567 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| CSR56_RS11660 () | 2279665..2280255 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CSR56_RS11665 () | 2280572..2280805 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CSR56_RS23470 () | 2280874..2280987 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CSR56_RS11670 () | 2281508..2282875 | + | 1368 | Protein_2140 | MHS family MFS transporter | - |
| CSR56_RS11675 () | 2282964..2284424 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| CSR56_RS11680 () | 2284459..2284662 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CSR56_RS11685 () | 2284839..2285525 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| CSR56_RS11690 () | 2285614..2286360 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| CSR56_RS11695 () | 2286497..2288542 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| CSR56_RS11700 () | 2288586..2289104 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| CSR56_RS11705 () | 2289415..2290535 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| CSR56_RS11710 () | 2290605..2290997 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| CSR56_RS11715 () | 2291252..2292142 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| CSR56_RS23775 () | 2292257..2292361 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CSR56_RS11720 () | 2292361..2292456 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CSR56_RS11725 () | 2292583..2293770 | - | 1188 | Protein_2152 | efflux MFS transporter YdeE | - |
| CSR56_RS11730 () | 2293965..2294864 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| CSR56_RS11735 () | 2294895..2295113 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| CSR56_RS11740 () | 2295145..2295528 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| CSR56_RS11745 () | 2295548..2295982 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|