MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64138 bp
Accession: NZ_CP024030 Location: 1..64138 Organism: Xanthomonas citri pv. citri strain Xcc49 Replicon: plasmid pXAC64
Accession: NZ_CP024030 Location: 1..64138 Organism: Xanthomonas citri pv. citri strain Xcc49 Replicon: plasmid pXAC64
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPA10_RS23135 () | 3..185 | + | 183 | Protein_0 | helix-turn-helix domain-containing protein | - |
| CPA10_RS23140 () | 316..732 | - | 417 | WP_087962480.1 | transposase | - |
| CPA10_RS23145 () | 786..992 | - | 207 | WP_011052961.1 | hypothetical protein | - |
| CPA10_RS23150 () | 1042..1371 | - | 330 | WP_005918642.1 | hypothetical protein | - |
| CPA10_RS23155 () | 1518..2117 | + | 600 | WP_015462601.1 | hypothetical protein | - |
| CPA10_RS23160 () | 2444..2893 | + | 450 | WP_015462602.1 | hypothetical protein | - |
| CPA10_RS23165 () | 2890..3495 | + | 606 | WP_011052963.1 | M48 family metalloprotease | - |
| CPA10_RS23170 () | 3492..4034 | + | 543 | WP_011052965.1 | hypothetical protein | - |
| CPA10_RS23180 () | 4503..5780 | - | 1278 | WP_011052115.1 | lytic murein transglycosylase | - |
| CPA10_RS23185 () | 5913..8903 | - | 2991 | WP_075701972.1 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| CPA10_RS23190 () | 8912..10186 | - | 1275 | Protein_10 | Tn3 family transposase tnpS_TnXax1 | Transposase |
| CPA10_RS23195 () | 10379..11434 | + | 1056 | WP_129545232.1 | Tn3 family transposase tnpT_TnXax1 | Transposase |
| CPA10_RS23200 () | 11568..11666 | + | 99 | Protein_12 | type III secretion system effector protein | - |
| CPA10_RS23225 () | 14004..17597 | + | 3594 | WP_129545234.1 | TAL effector repeat-containing protein | - |
| CPA10_RS23235 () | 17963..19183 | - | 1221 | WP_011052942.1 | replication initiation protein | - |
| CPA10_RS23240 () | 19431..19745 | - | 315 | WP_005918227.1 | hypothetical protein | - |
| CPA10_RS23245 () | 19890..20213 | - | 324 | WP_005918229.1 | hypothetical protein | - |
| CPA10_RS23250 () | 20210..20836 | - | 627 | WP_005931726.1 | Chromosome-partitioning ATPase Soj | VF |
| CPA10_RS23255 () | 21292..21600 | + | 309 | WP_015462607.1 | hypothetical protein | - |
| CPA10_RS23260 () | 21597..21806 | + | 210 | WP_015462608.1 | helix-turn-helix domain-containing protein | - |
| CPA10_RS23265 () | 22201..22554 | - | 354 | WP_039700904.1 | hypothetical protein | - |
| CPA10_RS23270 () | 22603..23312 | - | 710 | Protein_21 | plasmid stabilization protein | - |
| CPA10_RS23275 () | 23309..23755 | - | 447 | WP_011052937.1 | hypothetical protein | - |
| CPA10_RS23280 () | 24103..24498 | + | 396 | WP_011052973.1 | hypothetical protein | - |
| CPA10_RS23950 () | 24498..24671 | + | 174 | WP_011052974.1 | hypothetical protein | - |
| CPA10_RS23285 () | 24813..25085 | - | 273 | WP_005934628.1 | hypothetical protein | - |
| CPA10_RS23295 () | 25376..25726 | + | 351 | WP_121509194.1 | hypothetical protein | - |
| CPA10_RS24045 () | 25925..26266 | + | 342 | WP_205589465.1 | hypothetical protein | - |
| CPA10_RS23305 () | 26525..28099 | + | 1575 | WP_011052977.1 | type IV secretion system DNA-binding domain-containing protein | - |
| CPA10_RS23310 () | 28113..31088 | + | 2976 | WP_011052978.1 | Multifunctional conjugation protein TraI | Relaxase |
| CPA10_RS23315 () | 31142..31468 | - | 327 | WP_015462614.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CPA10_RS23320 () | 31465..31683 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| CPA10_RS23325 () | 31820..32206 | - | 387 | WP_003491149.1 | hypothetical protein | - |
| CPA10_RS23330 () | 32283..32702 | - | 420 | WP_011052981.1 | hypothetical protein | - |
| CPA10_RS23335 () | 32828..33706 | - | 879 | WP_011052982.1 | Type IV secretion system protein virB1 | VF |
| CPA10_RS23340 () | 33717..34739 | - | 1023 | WP_011052983.1 | Type IV secretion system protein VirB11 | VF |
| CPA10_RS23345 () | 34750..35970 | - | 1221 | WP_011052984.1 | Type IV secretion system protein virB10 | VF |
| CPA10_RS23350 () | 35972..36754 | - | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| CPA10_RS23355 () | 36779..37453 | - | 675 | WP_011052986.1 | type IV secretion system protein | - |
| CPA10_RS23360 () | 37450..38316 | - | 867 | WP_011052987.1 | type IV secretion system protein | - |
| CPA10_RS23365 () | 38318..38698 | - | 381 | WP_015462616.1 | hypothetical protein | - |
| CPA10_RS23370 () | 38691..38903 | - | 213 | WP_015462617.1 | hypothetical protein | - |
| CPA10_RS23375 () | 38951..39619 | - | 669 | WP_015462618.1 | VirB5 protein | - |
| CPA10_RS23380 () | 39616..42249 | - | 2634 | WP_011052991.1 | Type IV secretion system protein virB4 | VF |
| CPA10_RS23385 () | 42272..42571 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| CPA10_RS23390 () | 42568..42945 | - | 378 | WP_011052992.1 | TrbC/VirB2 family protein | - |
| CPA10_RS23395 () | 42966..43226 | - | 261 | Protein_46 | MobD protein | - |
| CPA10_RS23415 () | 44438..44674 | - | 237 | WP_129545236.1 | hypothetical protein | - |
| CPA10_RS23420 () | 44678..45007 | - | 330 | WP_011052996.1 | partition gene repressor | - |
| CPA10_RS23425 () | 45059..46090 | - | 1032 | WP_011052997.1 | ParB/RepB/Spo0J family partition protein | - |
| CPA10_RS23430 () | 46104..46871 | - | 768 | WP_011052998.1 | ParA family protein | - |
| CPA10_RS23435 () | 47674..48900 | - | 1227 | WP_129545237.1 | replication protein | - |
| CPA10_RS23440 () | 49180..50367 | - | 1188 | WP_011053001.1 | zeta toxin family protein | - |
| CPA10_RS23445 () | 50374..50637 | - | 264 | WP_005917846.1 | hypothetical protein | - |
| CPA10_RS23450 () | 50662..51063 | - | 402 | WP_011053002.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CPA10_RS23455 () | 51060..51320 | - | 261 | WP_011053003.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CPA10_RS23465 () | 51511..52086 | + | 576 | WP_121509196.1 | Tn3 family transposase ISPsy42 | Transposase |
| CPA10_RS23470 () | 52065..52701 | - | 637 | Protein_58 | IS3-like element ISXac3 family transposase | - |
| CPA10_RS23490 () | 54211..58314 | + | 4104 | WP_129545238.1 | TAL effector repeat-containing protein | - |
| CPA10_RS23495 () | 58405..58560 | - | 156 | Protein_60 | transposase | - |
| CPA10_RS23500 () | 58605..59303 | - | 699 | WP_129545239.1 | UPF0149 family protein | - |
| CPA10_RS23505 () | 59322..62297 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| CPA10_RS23510 () | 62302..62721 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| CPA10_RS23515 () | 62721..62960 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| CPA10_RS23520 () | 63174..64097 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|