MGE detailed information
MGE type: Prophage MGE length: 56159 bp
Accession: NZ_CP023960 Location: 1030202..1086360 Organism: Escherichia coli strain FDAARGOS_448 Replicon: chromosome
Accession: NZ_CP023960 Location: 1030202..1086360 Organism: Escherichia coli strain FDAARGOS_448 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRN68_RS06565 () | 1026715..1027461 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| CRN68_RS06570 () | 1027550..1028236 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| CRN68_RS06575 () | 1028414..1028617 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CRN68_RS06580 () | 1028653..1030113 | - | 1461 | WP_099004457.1 | mannitol dehydrogenase family protein | - |
| CRN68_RS06585 () | 1030202..1031485 | - | 1284 | Protein_986 | MHS family MFS transporter YdfJ | - |
| CRN68_RS28640 () | 1032089..1032202 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| CRN68_RS06590 () | 1032271..1032504 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CRN68_RS06595 () | 1032821..1033411 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CRN68_RS06600 () | 1033509..1033619 | - | 111 | Protein_990 | tail fiber assembly protein | - |
| CRN68_RS06605 () | 1033639..1033932 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| CRN68_RS06610 () | 1033943..1034647 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| CRN68_RS06615 () | 1034657..1034938 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| CRN68_RS06620 () | 1034935..1037334 | - | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CRN68_RS06625 () | 1037399..1037997 | - | 599 | Protein_995 | Outer membrane protein X | VF |
| CRN68_RS06630 () | 1038065..1041544 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| CRN68_RS06635 () | 1041605..1042207 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| CRN68_RS06640 () | 1042144..1042887 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| CRN68_RS06645 () | 1042893..1043591 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| CRN68_RS06650 () | 1043591..1043920 | - | 330 | WP_000847345.1 | phage tail protein | - |
| CRN68_RS06655 () | 1043917..1046478 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| CRN68_RS06660 () | 1046471..1046905 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| CRN68_RS06665 () | 1046887..1047309 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CRN68_RS06670 () | 1047325..1048065 | - | 741 | WP_001349920.1 | phage tail protein | - |
| CRN68_RS06675 () | 1048073..1048468 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| CRN68_RS06680 () | 1048465..1049043 | - | 579 | WP_033559746.1 | phage tail protein | - |
| CRN68_RS06685 () | 1049055..1049408 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| CRN68_RS06690 () | 1049420..1049818 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| CRN68_RS06695 () | 1049860..1050885 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| CRN68_RS06700 () | 1050940..1051272 | - | 333 | WP_001708751.1 | head decoration protein | - |
| CRN68_RS06705 () | 1051282..1052601 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| CRN68_RS06710 () | 1052582..1054183 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| CRN68_RS06715 () | 1054180..1054386 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CRN68_RS06720 () | 1054383..1056308 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| CRN68_RS06725 () | 1056283..1056828 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CRN68_RS06730 () | 1057217..1057450 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CRN68_RS06735 () | 1057508..1057918 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CRN68_RS06740 () | 1058070..1058243 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CRN68_RS06745 () | 1058415..1058570 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CRN68_RS28645 () | 1058650..1058715 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CRN68_RS28650 () | 1058718..1058894 | - | 177 | WP_138069336.1 | cold-shock protein | - |
| CRN68_RS06755 () | 1058887..1059584 | - | 698 | Protein_1022 | IS1 family transposase IS1X2 | Transposase |
| CRN68_RS06765 () | 1059693..1059905 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CRN68_RS06770 () | 1060268..1060765 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CRN68_RS06775 () | 1060762..1061295 | - | 534 | WP_001092971.1 | lysozyme | - |
| CRN68_RS06780 () | 1061292..1061603 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CRN68_RS06785 () | 1061608..1061823 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CRN68_RS29440 () | 1062043..1062213 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CRN68_RS06790 () | 1062380..1062838 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| CRN68_RS06800 () | 1063175..1064388 | + | 1214 | WP_162895303.1 | IS3 family transposase IS629 | Transposase |
| CRN68_RS06805 () | 1064602..1064817 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CRN68_RS06810 () | 1065118..1065330 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CRN68_RS28660 () | 1065385..1065474 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CRN68_RS06815 () | 1065752..1066504 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CRN68_RS06820 () | 1066518..1067567 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CRN68_RS06825 () | 1067569..1067847 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CRN68_RS06830 () | 1067914..1068165 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CRN68_RS06835 () | 1068382..1068537 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CRN68_RS06840 () | 1068609..1068896 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CRN68_RS06845 () | 1068896..1069135 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CRN68_RS06850 () | 1069160..1069465 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CRN68_RS06855 () | 1069668..1070000 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CRN68_RS06860 () | 1070437..1071750 | - | 1314 | WP_033559771.1 | ISNCY family transposase ISCARN112 | Transposase |
| CRN68_RS06870 () | 1072234..1073262 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| CRN68_RS06875 () | 1073259..1073873 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| CRN68_RS06880 () | 1074082..1074747 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| CRN68_RS06885 () | 1074950..1075348 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| CRN68_RS06890 () | 1075389..1076354 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| CRN68_RS06895 () | 1076335..1076856 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| CRN68_RS06900 () | 1076840..1077067 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| CRN68_RS06905 () | 1077148..1077555 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| CRN68_RS06910 () | 1077724..1077879 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CRN68_RS06915 () | 1077881..1078456 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| CRN68_RS06920 () | 1078943..1079131 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CRN68_RS06925 () | 1079128..1079319 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| CRN68_RS06930 () | 1079413..1081884 | + | 2472 | WP_000048363.1 | exonuclease | - |
| CRN68_RS06935 () | 1081957..1082208 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CRN68_RS06945 () | 1082279..1082956 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CRN68_RS06950 () | 1082956..1083303 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CRN68_RS06955 () | 1083323..1084894 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| CRN68_RS06960 () | 1084950..1086230 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CRN68_RS06970 () | 1086418..1087437 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| CRN68_RS06975 () | 1087449..1088663 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CRN68_RS06985 () | 1088869..1089195 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| CRN68_RS06990 () | 1089330..1089671 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| CRN68_RS06995 () | 1089706..1090266 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CRN68_RS07000 () | 1090269..1090979 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|