MGE detailed information
MGE type: Conjugative plasmid MGE length: 91648 bp
Accession: NZ_CP023895 Location: 1..91648 Organism: Escherichia coli strain FDAARGOS_433 Replicon: plasmid unnamed2
Accession: NZ_CP023895 Location: 1..91648 Organism: Escherichia coli strain FDAARGOS_433 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRN16_RS00010 () | 343..561 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| CRN16_RS27080 () | 589..936 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| CRN16_RS00020 () | 1062..3692 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| CRN16_RS00025 () | 3689..4075 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| CRN16_RS00030 () | 4072..4704 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| CRN16_RS00035 () | 4701..5693 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| CRN16_RS00040 () | 5723..6028 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| CRN16_RS00045 () | 6037..6675 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CRN16_RS00050 () | 6672..8522 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CRN16_RS00055 () | 8549..8806 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| CRN16_RS00060 () | 8799..9542 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CRN16_RS00065 () | 9556..9900 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| CRN16_RS00070 () | 10019..10303 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CRN16_RS00075 () | 10290..10835 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CRN16_RS00080 () | 10765..11112 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| CRN16_RS00085 () | 11060..11485 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| CRN16_RS00090 () | 11472..12845 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| CRN16_RS00095 () | 12842..15664 | + | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CRN16_RS00100 () | 15680..16165 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| CRN16_RS00105 () | 16214..16945 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| CRN16_RS00110 () | 17148..17885 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| CRN16_RS00115 () | 17936..20197 | + | 2262 | WP_046072940.1 | type IV conjugative transfer system coupling protein TraD | - |
| CRN16_RS00120 () | 20197..25467 | + | 5271 | WP_000948354.1 | Multifunctional conjugation protein TraI | Relaxase |
| CRN16_RS00125 () | 25487..26233 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| CRN16_RS00130 () | 26292..27152 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| CRN16_RS00135 () | 27255..27815 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| CRN16_RS00140 () | 27944..28156 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| CRN16_RS00145 () | 28401..28862 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| CRN16_RS00150 () | 28908..29117 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| CRN16_RS00155 () | 29155..29745 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| CRN16_RS00160 () | 29985..30239 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| CRN16_RS00170 () | 30477..30551 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CRN16_RS00175 () | 30544..31401 | + | 858 | WP_060591631.1 | incFII family plasmid replication initiator RepA | - |
| CRN16_RS27840 () | 32102..32242 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| CRN16_RS27590 () | 32340..32492 | + | 153 | WP_001427870.1 | hypothetical protein | - |
| CRN16_RS00185 () | 32660..32991 | + | 332 | Protein_36 | CPBP family intramembrane metalloprotease | - |
| CRN16_RS27085 () | 33084..33341 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CRN16_RS00190 () | 33274..33675 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CRN16_RS00200 () | 33924..34339 | + | 416 | Protein_39 | IS1 family transposase IS1R | Transposase |
| CRN16_RS00205 () | 34375..34920 | - | 546 | Protein_40 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CRN16_RS00210 () | 34986..35690 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRN16_RS00215 () | 35702..36820 | - | 1119 | Protein_42 | IS91 family transposase ISVsa3 | Transposase |
| CRN16_RS00225 () | 36884..37588 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRN16_RS00235 () | 37710..38624 | + | 915 | WP_023063803.1 | hypothetical protein | ARG |
| CRN16_RS00240 () | 38621..39858 | + | 1238 | Protein_45 | MFS transporter | - |
| CRN16_RS00245 () | 39858..40442 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CRN16_RS00255 () | 40935..41699 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| CRN16_RS00265 () | 42001..42558 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CRN16_RS00270 () | 42741..43601 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CRN16_RS00275 () | 43771..44526 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| CRN16_RS00280 () | 44607..45155 | - | 549 | WP_014342204.1 | cation:proton antiporter | - |
| CRN16_RS00285 () | 45218..45568 | + | 351 | Protein_52 | 60 kDa chaperonin | VF |
| CRN16_RS00290 () | 45762..46466 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRN16_RS00295 () | 46631..46924 | + | 294 | Protein_54 | IS30 family transposase | - |
| CRN16_RS00300 () | 47025..47837 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| CRN16_RS00305 () | 47841..48206 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| CRN16_RS00310 () | 48211..48849 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| CRN16_RS00315 () | 48860..49891 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| CRN16_RS00325 () | 50204..51745 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| CRN16_RS00330 () | 52150..52989 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| CRN16_RS00335 () | 52983..53330 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| CRN16_RS00340 () | 53494..54285 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| CRN16_RS27100 () | 54291..54581 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| CRN16_RS00345 () | 54693..55190 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| CRN16_RS00350 () | 55335..56201 | + | 867 | Protein_65 | IS91 family transposase ISAzo26 | Transposase |
| CRN16_RS00355 () | 56256..56960 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRN16_RS00360 () | 57026..58540 | + | 1515 | Protein_67 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CRN16_RS00365 () | 58609..59493 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| CRN16_RS00370 () | 59489..59658 | + | 170 | Protein_69 | resolvase | - |
| CRN16_RS27595 () | 59665..59832 | - | 168 | WP_001430249.1 | hypothetical protein | - |
| CRN16_RS00375 () | 60004..62679 | - | 2676 | WP_015059139.1 | hypothetical protein | - |
| CRN16_RS00380 () | 62982..63983 | + | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| CRN16_RS00385 () | 64208..64670 | - | 463 | Protein_73 | hypothetical protein | - |
| CRN16_RS00390 () | 64779..65129 | - | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| CRN16_RS00395 () | 65132..66094 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| CRN16_RS00400 () | 66226..66534 | + | 309 | WP_039021875.1 | hypothetical protein | - |
| CRN16_RS00410 () | 66611..67294 | + | 684 | WP_000085889.1 | DNA methylase | - |
| CRN16_RS00415 () | 67295..67516 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| CRN16_RS00420 () | 67529..67963 | + | 435 | WP_000274504.1 | DUF1380 family protein | - |
| CRN16_RS27110 () | 68008..68778 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| CRN16_RS00435 () | 69261..69563 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CRN16_RS00440 () | 69610..70032 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| CRN16_RS00445 () | 70029..70220 | + | 192 | WP_039021874.1 | hypothetical protein | - |
| CRN16_RS00450 () | 70534..72201 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| CRN16_RS00465 () | 73601..73831 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| CRN16_RS00470 () | 73883..75244 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| CRN16_RS00475 () | 75291..75854 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| CRN16_RS00485 () | 75940..76401 | - | 462 | WP_001479900.1 | hypothetical protein | - |
| CRN16_RS00495 () | 76703..77230 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| CRN16_RS00500 () | 77288..77521 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| CRN16_RS00505 () | 77582..79605 | + | 2024 | Protein_91 | ParB/RepB/Spo0J family partition protein | - |
| CRN16_RS00510 () | 79674..80108 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| CRN16_RS00515 () | 80105..80824 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 80836..81060 | + | 225 | NuclAT_0 | - | - |
| - () | 80836..81060 | + | 225 | NuclAT_0 | - | - |
| - () | 80836..81060 | + | 225 | NuclAT_0 | - | - |
| - () | 80836..81060 | + | 225 | NuclAT_0 | - | - |
| CRN16_RS27600 () | 80845..81024 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 80993..81058 | + | 66 | - | - | Antitoxin Detail |
| CRN16_RS00525 () | 81104..81262 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CRN16_RS27845 () | 81500..81877 | - | 378 | Protein_96 | hypothetical protein | - |
| CRN16_RS00545 () | 82177..82473 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| CRN16_RS00550 () | 82584..83405 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| CRN16_RS00555 () | 83702..84304 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| CRN16_RS00565 () | 84627..85010 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| CRN16_RS00570 () | 85204..85875 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| CRN16_RS00575 () | 86012..86239 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| CRN16_RS00580 () | 86272..86631 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| CRN16_RS00585 () | 86646..86957 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| CRN16_RS00590 () | 86979..87545 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| CRN16_RS00595 () | 87532..88260 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| CRN16_RS00600 () | 88260..89711 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| CRN16_RS00605 () | 89680..90267 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| CRN16_RS00610 () | 90206..90574 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| CRN16_RS00615 () | 90571..91086 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CRN16_RS00620 () | 91221..91442 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|