MGE detailed information
MGE type: Prophage MGE length: 51422 bp
Accession: NZ_CP023820 Location: 1797734..1849155 Organism: Escherichia coli strain 7/2 Replicon: chromosome
Accession: NZ_CP023820 Location: 1797734..1849155 Organism: Escherichia coli strain 7/2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT46_RS08695 () | 1793050..1793877 | + | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| CRT46_RS08700 () | 1793874..1794731 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| CRT46_RS08705 () | 1794728..1795585 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| CRT46_RS08710 () | 1796058..1796852 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| CRT46_RS08715 () | 1796977..1797128 | + | 152 | Protein_1673 | DinI-like family protein | - |
| CRT46_RS08720 () | 1797398..1797691 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| CRT46_RS08725 () | 1797734..1798774 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| CRT46_RS08730 () | 1798784..1799065 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| CRT46_RS08735 () | 1799065..1801440 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CRT46_RS08740 () | 1801505..1802104 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| CRT46_RS08745 () | 1802172..1805651 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| CRT46_RS08750 () | 1805712..1806314 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| CRT46_RS08755 () | 1806251..1806994 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| CRT46_RS08760 () | 1807000..1807698 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| CRT46_RS08765 () | 1807698..1808027 | - | 330 | WP_000847345.1 | phage tail protein | - |
| CRT46_RS08770 () | 1808024..1810585 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| CRT46_RS08775 () | 1810578..1811012 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| CRT46_RS08780 () | 1810994..1811416 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| CRT46_RS08785 () | 1811432..1812172 | - | 741 | WP_001349920.1 | phage tail protein | - |
| CRT46_RS08790 () | 1812180..1812575 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| CRT46_RS08795 () | 1812572..1813150 | - | 579 | WP_000975070.1 | phage tail protein | - |
| CRT46_RS08800 () | 1813162..1813515 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| CRT46_RS08805 () | 1813527..1813925 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| CRT46_RS08810 () | 1813967..1814992 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| CRT46_RS08815 () | 1815047..1815379 | - | 333 | WP_001708751.1 | head decoration protein | - |
| CRT46_RS08820 () | 1815389..1816708 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| CRT46_RS08825 () | 1816689..1818290 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| CRT46_RS08830 () | 1818287..1818493 | - | 207 | WP_000198149.1 | gpW family protein | - |
| CRT46_RS08835 () | 1818490..1820415 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| CRT46_RS08840 () | 1820390..1820935 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| CRT46_RS08845 () | 1821324..1821557 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CRT46_RS08850 () | 1821615..1822025 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CRT46_RS08855 () | 1822243..1822940 | + | 698 | Protein_1701 | IS1 family transposase | - |
| CRT46_RS08860 () | 1822951..1823127 | - | 177 | WP_124760005.1 | addiction module toxin, GnsA/GnsB family | - |
| CRT46_RS08865 () | 1823299..1823454 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CRT46_RS08870 () | 1823534..1823599 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CRT46_RS08875 () | 1823602..1823790 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CRT46_RS08880 () | 1823801..1824013 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CRT46_RS08885 () | 1824376..1824873 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CRT46_RS08890 () | 1824870..1825403 | - | 534 | WP_001092971.1 | lysozyme | - |
| CRT46_RS08895 () | 1825400..1825711 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CRT46_RS08900 () | 1825716..1825931 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CRT46_RS26800 () | 1826151..1826321 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| CRT46_RS08910 () | 1826488..1826946 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| CRT46_RS08920 () | 1827397..1827612 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CRT46_RS08925 () | 1827913..1828125 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CRT46_RS08930 () | 1828180..1828269 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CRT46_RS08935 () | 1828547..1829299 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CRT46_RS08940 () | 1829313..1830362 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| CRT46_RS08945 () | 1830364..1830642 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CRT46_RS08950 () | 1830709..1830960 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CRT46_RS08955 () | 1831177..1831332 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CRT46_RS08960 () | 1831404..1831691 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CRT46_RS08965 () | 1831691..1831930 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CRT46_RS08970 () | 1831955..1832260 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CRT46_RS08975 () | 1832463..1832795 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CRT46_RS08980 () | 1833232..1834545 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| CRT46_RS08985 () | 1835029..1836057 | - | 1029 | WP_001345551.1 | DUF4868 domain-containing protein | - |
| CRT46_RS08990 () | 1836054..1836668 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| CRT46_RS08995 () | 1836877..1837542 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| CRT46_RS09000 () | 1837745..1838143 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| CRT46_RS09005 () | 1838184..1839149 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| CRT46_RS09010 () | 1839130..1839651 | - | 522 | WP_000705355.1 | hypothetical protein | - |
| CRT46_RS09015 () | 1839635..1839862 | - | 228 | WP_000921596.1 | transcriptional regulator | - |
| CRT46_RS09020 () | 1839943..1840350 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| CRT46_RS09025 () | 1840519..1840674 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CRT46_RS09030 () | 1840676..1841251 | + | 576 | WP_000344950.1 | hypothetical protein | - |
| CRT46_RS09035 () | 1841738..1841926 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CRT46_RS09040 () | 1841923..1842114 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| CRT46_RS09045 () | 1842208..1844679 | + | 2472 | WP_000048363.1 | exonuclease | - |
| CRT46_RS09050 () | 1844752..1845003 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CRT46_RS09060 () | 1845074..1845751 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| CRT46_RS09065 () | 1845751..1846098 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| CRT46_RS09070 () | 1846118..1847689 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| CRT46_RS09075 () | 1847745..1849025 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CRT46_RS09085 () | 1849213..1850232 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| CRT46_RS09090 () | 1850244..1851458 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CRT46_RS09095 () | 1851664..1851990 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| CRT46_RS09100 () | 1852125..1852466 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| CRT46_RS09105 () | 1852501..1853061 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| CRT46_RS09110 () | 1853064..1853774 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|