MGE detailed information
MGE type: Prophage MGE length: 61668 bp
Accession: NZ_CP023820 Location: 1537619..1599286 Organism: Escherichia coli strain 7/2 Replicon: chromosome
Accession: NZ_CP023820 Location: 1537619..1599286 Organism: Escherichia coli strain 7/2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRT46_RS07420 () | 1532900..1533928 | + | 1029 | WP_001523164.1 | HlyD family secretion protein | - |
| CRT46_RS07425 () | 1533925..1535439 | + | 1515 | WP_020233354.1 | DHA2 family efflux MFS transporter permease subunit | - |
| CRT46_RS07430 () | 1535634..1536197 | + | 564 | WP_001046832.1 | DNA endonuclease SmrA | - |
| CRT46_RS07435 () | 1536218..1537150 | - | 933 | WP_020233353.1 | sensor domain-containing diguanylate cyclase | - |
| CRT46_RS07440 () | 1537215..1537912 | + | 698 | Protein_1424 | IS1 family transposase | - |
| CRT46_RS07445 () | 1537928..1538227 | - | 300 | Protein_1425 | sensor domain-containing diguanylate cyclase | - |
| CRT46_RS26785 () | 1538421..1538468 | + | 48 | WP_211180494.1 | protein YnaN | - |
| CRT46_RS07450 () | 1538482..1539465 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| CRT46_RS07455 () | 1539943..1541316 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| CRT46_RS07460 () | 1541445..1542380 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| CRT46_RS07465 () | 1542432..1543667 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CRT46_RS07470 () | 1543669..1543884 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| CRT46_RS07475 () | 1543984..1544172 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 1543988..1544166 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1543988..1544166 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1543988..1544166 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1543988..1544166 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| CRT46_RS07480 () | 1544210..1544359 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| CRT46_RS07485 () | 1544415..1545224 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| CRT46_RS07490 () | 1545217..1547817 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| CRT46_RS07495 () | 1547919..1548194 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| CRT46_RS07500 () | 1548269..1548439 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| CRT46_RS07505 () | 1548439..1548660 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| CRT46_RS07510 () | 1549102..1549590 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| CRT46_RS07515 () | 1549587..1549742 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| CRT46_RS07530 () | 1550175..1550594 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| CRT46_RS07535 () | 1550674..1550928 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| CRT46_RS07540 () | 1550925..1551347 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| CRT46_RS07545 () | 1551425..1552213 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| CRT46_RS07550 () | 1552220..1552966 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| CRT46_RS07555 () | 1552989..1553750 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| CRT46_RS07560 () | 1553766..1554188 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| CRT46_RS07565 () | 1554350..1554853 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| CRT46_RS07575 () | 1554974..1555747 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| CRT46_RS07580 () | 1556270..1556395 | + | 126 | WP_001445775.1 | type I toxin-antitoxin system Hok family toxin | - |
| CRT46_RS07585 () | 1556478..1556819 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| CRT46_RS07590 () | 1557687..1558286 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| CRT46_RS07595 () | 1558286..1558576 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| CRT46_RS07600 () | 1558573..1559115 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| CRT46_RS07605 () | 1559337..1559906 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| CRT46_RS07610 () | 1559875..1560177 | - | 303 | WP_001328752.1 | hypothetical protein | - |
| CRT46_RS07615 () | 1560254..1560595 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| CRT46_RS07620 () | 1560599..1561075 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| CRT46_RS07625 () | 1561292..1561477 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| CRT46_RS07630 () | 1561674..1563131 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| CRT46_RS07635 () | 1563269..1564060 | + | 792 | WP_001291105.1 | ParB/Srx family N-terminal domain-containing protein | - |
| CRT46_RS07640 () | 1564053..1564985 | + | 933 | WP_020233805.1 | hypothetical protein | - |
| CRT46_RS07645 () | 1564921..1565172 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| CRT46_RS07650 () | 1565176..1566270 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| CRT46_RS07655 () | 1566251..1567552 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| CRT46_RS07660 () | 1567555..1568961 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| CRT46_RS07665 () | 1568945..1570057 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| CRT46_RS07670 () | 1570162..1570926 | + | 765 | WP_029702112.1 | hypothetical protein | - |
| CRT46_RS07675 () | 1571025..1572164 | + | 1140 | WP_020233804.1 | hypothetical protein | - |
| CRT46_RS26545 () | 1572207..1572383 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| CRT46_RS07680 () | 1572387..1572782 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| CRT46_RS07685 () | 1572782..1573165 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| CRT46_RS07690 () | 1573166..1573546 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| CRT46_RS07695 () | 1573543..1573935 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| CRT46_RS07700 () | 1573962..1574924 | + | 963 | WP_001328756.1 | hypothetical protein | - |
| CRT46_RS07705 () | 1575075..1575434 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| CRT46_RS07710 () | 1575542..1575742 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| CRT46_RS07715 () | 1575906..1579139 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| CRT46_RS07720 () | 1579132..1579470 | + | 339 | WP_000024051.1 | phage tail protein | - |
| CRT46_RS07725 () | 1579470..1580168 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| CRT46_RS07730 () | 1580174..1580917 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| CRT46_RS07735 () | 1580854..1581455 | + | 602 | Protein_1482 | tail assembly protein | - |
| CRT46_RS07740 () | 1581516..1584995 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| CRT46_RS07745 () | 1585063..1585662 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| CRT46_RS07750 () | 1585727..1588126 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| CRT46_RS07755 () | 1588123..1588404 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| CRT46_RS07760 () | 1588414..1589118 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| CRT46_RS07765 () | 1589129..1589422 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| CRT46_RS07770 () | 1589442..1589552 | + | 111 | Protein_1489 | tail fiber assembly protein | - |
| CRT46_RS07775 () | 1589650..1590241 | - | 592 | Protein_1490 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CRT46_RS07780 () | 1590558..1590791 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CRT46_RS07785 () | 1590860..1590973 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| CRT46_RS07790 () | 1591577..1592860 | + | 1284 | Protein_1493 | MHS family MFS transporter YdfJ | - |
| CRT46_RS07795 () | 1592949..1594409 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| CRT46_RS07800 () | 1594445..1594648 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CRT46_RS07805 () | 1594826..1595512 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| CRT46_RS07810 () | 1595601..1596347 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| CRT46_RS07815 () | 1596484..1598529 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| CRT46_RS07820 () | 1598894..1599286 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| CRT46_RS07825 () | 1599541..1600431 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
| CRT46_RS26790 () | 1600546..1600650 | - | 105 | WP_211180496.1 | protein MgtT | - |
| CRT46_RS07830 () | 1600650..1600745 | - | 96 | WP_000901367.1 | protein MgtS | - |
| CRT46_RS07835 () | 1600872..1602059 | - | 1188 | WP_001523325.1 | efflux MFS transporter YdeE | - |
| CRT46_RS07840 () | 1602254..1603153 | + | 900 | WP_000087220.1 | O-acetylserine/cysteine exporter | - |
| CRT46_RS07845 () | 1603198..1603896 | - | 699 | WP_020233615.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|