MGE detailed information
MGE type: IScluster/Tn MGE length: 29859 bp
Accession: NZ_CP023816 Location: 70199..100057 Organism: Escherichia coli strain IMT16316 Replicon: plasmid pEcIMT16316
Accession: NZ_CP023816 Location: 70199..100057 Organism: Escherichia coli strain IMT16316 Replicon: plasmid pEcIMT16316
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRI72_RS25440 () | 66092..66832 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| CRI72_RS25445 () | 66953..67135 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| CRI72_RS25455 () | 67478..67785 | - | 308 | Protein_78 | type II toxin-antitoxin system ParD family antitoxin | - |
| CRI72_RS25465 () | 68278..69447 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| CRI72_RS25470 () | 69480..69608 | + | 129 | Protein_80 | IS481 family transposase | - |
| CRI72_RS25475 () | 69643..69837 | - | 195 | WP_086258557.1 | hypothetical protein | - |
| CRI72_RS25485 () | 69879..70576 | + | 698 | Protein_82 | IS1 family transposase IS1R | Transposase |
| CRI72_RS25490 () | 70592..70711 | + | 120 | Protein_83 | ArsR family transcriptional regulator | - |
| CRI72_RS25495 () | 70689..71312 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CRI72_RS25500 () | 71394..72599 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| CRI72_RS25505 () | 72712..73305 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CRI72_RS25510 () | 73438..73809 | + | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| CRI72_RS25515 () | 73819..74340 | - | 522 | Protein_88 | IS4 family transposase IS10R | Transposase |
| CRI72_RS25520 () | 74347..74535 | - | 189 | Protein_89 | IS1 family transposase | - |
| CRI72_RS25530 () | 74600..75304 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| CRI72_RS26440 () | 75665..75951 | + | 287 | Protein_91 | DUF2726 domain-containing protein | - |
| - () | 75918..75978 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 75918..75978 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 75918..75978 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 75918..75978 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| CRI72_RS25545 () | 76023..76157 | + | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| CRI72_RS25550 () | 76454..76708 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| CRI72_RS25555 () | 76868..77614 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| CRI72_RS25560 () | 77629..79170 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| CRI72_RS26445 () | 79401..79535 | + | 135 | Protein_96 | protein CopA/IncA | - |
| CRI72_RS25570 () | 79532..79606 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| CRI72_RS25575 () | 79599..80456 | + | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| CRI72_RS25585 () | 81396..82049 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| CRI72_RS26330 () | 82142..82399 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CRI72_RS25590 () | 82332..82733 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CRI72_RS25595 () | 82870..85767 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| CRI72_RS25600 () | 85862..86467 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| CRI72_RS25605 () | 86491..87240 | - | 750 | Protein_104 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CRI72_RS25610 () | 87229..87636 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| CRI72_RS25615 () | 87774..88658 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| CRI72_RS25620 () | 88690..89889 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| CRI72_RS25625 () | 89995..90645 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| CRI72_RS25630 () | 90677..90919 | - | 243 | WP_032140899.1 | hypothetical protein | - |
| CRI72_RS25635 () | 90961..92475 | - | 1515 | Protein_110 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| CRI72_RS25640 () | 92541..93245 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRI72_RS25650 () | 93279..93521 | - | 243 | WP_098944979.1 | class A beta-lactamase | - |
| CRI72_RS25655 () | 93704..94261 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CRI72_RS25660 () | 94425..94637 | + | 213 | Protein_114 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CRI72_RS25665 () | 94825..95538 | + | 714 | Protein_115 | IS1380 family transposase ISEcp1 | Transposase |
| CRI72_RS25675 () | 95590..96294 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRI72_RS25680 () | 96358..96696 | + | 339 | Protein_117 | recombinase family protein | - |
| CRI72_RS25685 () | 96879..97739 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CRI72_RS25690 () | 97886..98167 | + | 282 | Protein_119 | transposase zinc-binding domain-containing protein | - |
| CRI72_RS25695 () | 98326..99030 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| CRI72_RS25705 () | 99152..100057 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| CRI72_RS25710 () | 100054..101292 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| CRI72_RS25715 () | 101292..101876 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| CRI72_RS25725 () | 102369..103133 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| CRI72_RS26450 () | 103251..103316 | - | 66 | Protein_125 | EAL domain-containing protein | - |
| CRI72_RS25735 () | 103360..103665 | - | 306 | WP_000130000.1 | PadR family transcriptional regulator | - |
| CRI72_RS25740 () | 103676..104881 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|