MGE detailed information
MGE type: Prophage MGE length: 58961 bp
Accession: NZ_CP023741 Location: 5315044..5374004 Organism: Sphingobium yanoikuyae strain S72 Replicon: chromosome
Accession: NZ_CP023741 Location: 5315044..5374004 Organism: Sphingobium yanoikuyae strain S72 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6768_RS26375 () | 5311209..5311349 | - | 141 | WP_172438740.1 | hypothetical protein | - |
| A6768_RS24670 () | 5311496..5313460 | - | 1965 | WP_004210075.1 | oligopeptide transporter, OPT family | - |
| A6768_RS24675 () | 5313551..5314327 | - | 777 | WP_097385327.1 | lipolytic enzyme | - |
| A6768_RS24680 () | 5314284..5314655 | - | 372 | WP_004210078.1 | heat shock protein HspQ | - |
| A6768_RS24690 () | 5315023..5316384 | + | 1362 | WP_097385328.1 | hypothetical protein ; Integrase | Integrase |
| A6768_RS24695 () | 5316388..5316573 | - | 186 | WP_097385329.1 | AlpA family phage regulatory protein | - |
| A6768_RS24700 () | 5316570..5317229 | - | 660 | WP_097385330.1 | hypothetical protein | - |
| A6768_RS24705 () | 5317572..5317814 | - | 243 | WP_097385331.1 | DUF2312 domain-containing protein | - |
| A6768_RS24710 () | 5317825..5318007 | - | 183 | WP_097385332.1 | hypothetical protein | - |
| A6768_RS24715 () | 5317997..5318458 | - | 462 | WP_150131282.1 | hypothetical protein | - |
| A6768_RS24720 () | 5318476..5321202 | - | 2727 | WP_097385334.1 | toprim domain-containing protein | - |
| A6768_RS24725 () | 5321308..5321544 | - | 237 | WP_172438711.1 | ogr/Delta-like zinc finger family protein | - |
| A6768_RS24730 () | 5321605..5322093 | - | 489 | WP_097384353.1 | hypothetical protein | - |
| A6768_RS24735 () | 5322090..5322308 | - | 219 | WP_097385335.1 | hypothetical protein | - |
| A6768_RS24740 () | 5322305..5322568 | - | 264 | WP_097385336.1 | hypothetical protein | - |
| A6768_RS24745 () | 5322568..5322897 | - | 330 | WP_097385337.1 | helix-turn-helix domain-containing protein | - |
| A6768_RS24750 () | 5322963..5323643 | + | 681 | WP_097385338.1 | helix-turn-helix transcriptional regulator | - |
| A6768_RS24755 () | 5323661..5324059 | + | 399 | WP_097385811.1 | hypothetical protein | - |
| A6768_RS26055 () | 5324196..5324795 | + | 600 | WP_150131283.1 | hypothetical protein | - |
| A6768_RS26060 () | 5325023..5325208 | + | 186 | WP_150131284.1 | hypothetical protein | - |
| A6768_RS24760 () | 5325363..5325659 | + | 297 | WP_097385339.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A6768_RS24765 () | 5325697..5325978 | + | 282 | WP_097385719.1 | putative addiction module antidote protein | Antitoxin Detail |
| A6768_RS24770 () | 5325979..5326989 | - | 1011 | WP_097385340.1 | late control protein | - |
| A6768_RS24775 () | 5326986..5327399 | - | 414 | WP_097385812.1 | phage tail protein | - |
| A6768_RS24780 () | 5327405..5329807 | - | 2403 | WP_097385341.1 | phage tail tape measure protein | - |
| A6768_RS24785 () | 5329807..5329947 | - | 141 | WP_097385342.1 | GpE family phage tail protein | - |
| A6768_RS24790 () | 5329956..5330267 | - | 312 | WP_097385343.1 | phage tail assembly protein | - |
| A6768_RS24795 () | 5330328..5330840 | - | 513 | WP_097385344.1 | phage major tail tube protein | - |
| A6768_RS24800 () | 5330882..5332057 | - | 1176 | WP_097385345.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| A6768_RS24805 () | 5332072..5332422 | - | 351 | WP_097385346.1 | GPW/gp25 family protein | - |
| A6768_RS24810 () | 5332422..5332994 | - | 573 | WP_097385347.1 | phage baseplate assembly protein V | - |
| A6768_RS26065 () | 5333532..5334095 | - | 564 | WP_150131285.1 | hypothetical protein | - |
| A6768_RS24815 () | 5334219..5336384 | - | 2166 | WP_097385348.1 | hypothetical protein | - |
| A6768_RS24820 () | 5336388..5336852 | - | 465 | WP_097385349.1 | hypothetical protein | - |
| A6768_RS24825 () | 5336855..5337913 | - | 1059 | WP_097385350.1 | hypothetical protein | - |
| A6768_RS24830 () | 5337916..5338557 | - | 642 | WP_097385351.1 | phage tail protein I | - |
| A6768_RS24835 () | 5338554..5339447 | - | 894 | WP_097385813.1 | baseplate J/gp47 family protein | - |
| A6768_RS26070 () | 5339656..5340540 | - | 885 | WP_150131287.1 | hypothetical protein | - |
| A6768_RS24840 () | 5340546..5341574 | - | 1029 | WP_097385352.1 | hypothetical protein | - |
| A6768_RS24845 () | 5341769..5342440 | - | 672 | WP_097385353.1 | phage virion morphogenesis protein | - |
| A6768_RS24850 () | 5342437..5342919 | - | 483 | WP_097385354.1 | phage tail protein | - |
| A6768_RS24855 () | 5342922..5343107 | - | 186 | WP_097385814.1 | hypothetical protein | - |
| A6768_RS24860 () | 5343052..5343441 | - | 390 | WP_097385355.1 | hypothetical protein | - |
| A6768_RS24865 () | 5343438..5343977 | - | 540 | WP_097385356.1 | hypothetical protein | - |
| A6768_RS24870 () | 5343981..5344313 | - | 333 | WP_097384377.1 | hypothetical protein | - |
| A6768_RS24875 () | 5344317..5344541 | - | 225 | WP_097384378.1 | tail protein X | - |
| A6768_RS24880 () | 5344541..5345023 | - | 483 | WP_097384379.1 | head completion/stabilization protein | - |
| A6768_RS24885 () | 5345020..5345286 | - | 267 | WP_150131264.1 | hypothetical protein | - |
| A6768_RS24890 () | 5345411..5346280 | - | 870 | WP_097384381.1 | terminase | - |
| A6768_RS24895 () | 5346323..5347375 | - | 1053 | WP_097384382.1 | phage major capsid protein, P2 family | - |
| A6768_RS24900 () | 5347416..5348267 | - | 852 | WP_097384383.1 | GPO family capsid scaffolding protein | - |
| A6768_RS24905 () | 5348429..5350285 | + | 1857 | WP_097384384.1 | terminase family protein | - |
| A6768_RS24910 () | 5350282..5351349 | + | 1068 | WP_097384385.1 | phage portal protein | - |
| A6768_RS24920 () | 5353336..5354403 | - | 1068 | WP_097385357.1 | hypothetical protein | - |
| A6768_RS24925 () | 5354478..5356712 | - | 2235 | WP_097385358.1 | hypothetical protein | VF |
| A6768_RS24930 () | 5356716..5357414 | - | 699 | WP_097385359.1 | hypothetical protein | VF |
| A6768_RS24935 () | 5357411..5358739 | - | 1329 | WP_097385360.1 | O-antigen ligase family protein | - |
| A6768_RS26380 () | 5358896..5359168 | - | 273 | WP_172438741.1 | hypothetical protein | - |
| A6768_RS24940 () | 5359158..5360165 | + | 1008 | WP_172438742.1 | M48 family metalloprotease | - |
| A6768_RS24945 () | 5360162..5360392 | + | 231 | WP_097385361.1 | hypothetical protein | - |
| A6768_RS24950 () | 5360401..5361117 | - | 717 | WP_172438743.1 | hypothetical protein | VF |
| A6768_RS26075 () | 5361259..5361531 | + | 273 | WP_150131288.1 | hypothetical protein | - |
| A6768_RS24955 () | 5362395..5362901 | + | 507 | WP_097385816.1 | MucR family transcriptional regulator | - |
| A6768_RS24960 () | 5363395..5363925 | - | 531 | WP_150131290.1 | hypothetical protein | - |
| A6768_RS24965 () | 5364087..5365778 | - | 1692 | WP_172438744.1 | response regulator | - |
| A6768_RS24970 () | 5365765..5367111 | - | 1347 | WP_172438745.1 | EAL domain-containing protein | - |
| A6768_RS24975 () | 5367283..5368053 | - | 771 | WP_097385366.1 | serine/threonine protein phosphatase | - |
| A6768_RS24980 () | 5368047..5369159 | - | 1113 | WP_097385367.1 | acyltransferase | - |
| A6768_RS24985 () | 5369568..5370863 | + | 1296 | WP_172438746.1 | hypothetical protein | VF |
| A6768_RS24990 () | 5370936..5371823 | + | 888 | WP_097385817.1 | Bifunctional protein GlmU | VF |
| A6768_RS24995 () | 5372021..5372461 | + | 441 | WP_143560265.1 | winged helix-turn-helix domain-containing protein | - |
| A6768_RS25000 () | 5372481..5374004 | - | 1524 | WP_097385370.1 | hypothetical protein | - |
| A6768_RS25005 () | 5374001..5374504 | - | 504 | WP_097385371.1 | serine acetyltransferase | - |
| A6768_RS25010 () | 5374501..5375670 | - | 1170 | WP_097385372.1 | glycosyltransferase | - |
| A6768_RS25015 () | 5375702..5376928 | - | 1227 | WP_172438747.1 | oligosaccharide flippase family protein | - |
| A6768_RS25020 () | 5377013..5378035 | - | 1023 | WP_097385374.1 | GDP-mannose 4,6-dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|