MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 156471 bp
Accession: NZ_CP023737 Location: 2816443..2972913 Organism: Methylosinus trichosporium OB3b Replicon: chromosome
Accession: NZ_CP023737 Location: 2816443..2972913 Organism: Methylosinus trichosporium OB3b Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQW49_RS13485 () | 2811799..2812737 | + | 939 | WP_003608971.1 | GTPase Era | - |
| CQW49_RS13490 () | 2812828..2814321 | - | 1494 | WP_003608969.1 | ABC transporter permease subunit | - |
| CQW49_RS13495 () | 2814318..2815076 | - | 759 | WP_003608968.1 | ATP-binding cassette domain-containing protein | - |
| CQW49_RS13500 () | 2815207..2816076 | - | 870 | WP_003608966.1 | right-handed parallel beta-helix repeat-containing protein | - |
| CQW49_RS13505 () | 2816276..2816965 | + | 690 | WP_024749706.1 | histidine biosynthesis protein | - |
| CQW49_RS13510 () | 2817029..2817520 | - | 492 | WP_193787568.1 | formaldehyde-activating enzyme | - |
| CQW49_RS13515 () | 2817850..2818356 | - | 507 | WP_003608959.1 | formaldehyde-activating enzyme | - |
| CQW49_RS13520 () | 2818495..2819358 | - | 864 | WP_003608957.1 | triphosphoribosyl-dephospho-CoA synthase | - |
| CQW49_RS13525 () | 2819351..2820316 | - | 966 | WP_003608955.1 | RimK family alpha-L-glutamate ligase | - |
| CQW49_RS13530 () | 2820270..2821247 | - | 978 | WP_003608953.1 | methenyltetrahydromethanopterin cyclohydrolase | - |
| CQW49_RS13535 () | 2821764..2822249 | + | 486 | WP_155931266.1 | hypothetical protein | - |
| CQW49_RS13540 () | 2822952..2823476 | - | 525 | WP_003608950.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CQW49_RS13545 () | 2823473..2823748 | - | 276 | WP_003608948.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CQW49_RS13550 () | 2823901..2825124 | - | 1224 | WP_003608946.1 | alpha/beta hydrolase | - |
| CQW49_RS13555 () | 2825282..2825854 | + | 573 | WP_003608944.1 | L,D-transpeptidase | - |
| CQW49_RS13560 () | 2826239..2827024 | + | 786 | WP_099831891.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| CQW49_RS13565 () | 2827021..2828007 | + | 987 | WP_003608940.1 | ferrochelatase | - |
| CQW49_RS13570 () | 2828011..2828799 | - | 789 | WP_024749702.1 | uracil-DNA glycosylase | - |
| CQW49_RS13575 () | 2828951..2829697 | + | 747 | WP_003615250.1 | ABC transporter ATP-binding protein | - |
| CQW49_RS13580 () | 2829694..2830512 | + | 819 | WP_003615248.1 | ABC transporter permease | - |
| CQW49_RS13585 () | 2830529..2831962 | + | 1434 | WP_003615246.1 | DNA photolyase family protein | - |
| CQW49_RS13590 () | 2832000..2832689 | + | 690 | WP_003615245.1 | hypothetical protein | - |
| CQW49_RS13595 () | 2832735..2834972 | - | 2238 | WP_003615243.1 | TonB-dependent siderophore receptor | - |
| CQW49_RS13600 () | 2835050..2835463 | - | 414 | WP_003615241.1 | hypothetical protein | - |
| CQW49_RS13605 () | 2835710..2836402 | + | 693 | WP_003615238.1 | Transcriptional regulatory protein BasR | VF |
| CQW49_RS13610 () | 2836399..2837775 | + | 1377 | WP_003615237.1 | HAMP domain-containing histidine kinase | - |
| CQW49_RS13615 () | 2837995..2839230 | - | 1236 | WP_003615235.1 | tetracycline resistance MFS efflux pump | - |
| CQW49_RS13625 () | 2839550..2850373 | - | 10824 | WP_081735699.1 | Tyrocidine synthase 3 | VF |
| CQW49_RS13630 () | 2850788..2852197 | - | 1410 | WP_024749699.1 | Swarming motility regulation sensor protein RssA | VF |
| CQW49_RS13635 () | 2852200..2852871 | - | 672 | WP_003613619.1 | Transcriptional activator protein CzcR | VF |
| CQW49_RS13640 () | 2853096..2854265 | - | 1170 | WP_003613618.1 | GTP-binding protein | - |
| CQW49_RS13645 () | 2854262..2855668 | - | 1407 | WP_099831792.1 | serine hydrolase | - |
| CQW49_RS13650 () | 2855875..2856249 | - | 375 | WP_003613616.1 | hypothetical protein | - |
| CQW49_RS13655 () | 2856350..2857099 | + | 750 | WP_003613614.1 | Protein RhsC | VF |
| CQW49_RS13660 () | 2857102..2857341 | + | 240 | WP_003613613.1 | hypothetical protein | - |
| CQW49_RS13665 () | 2857772..2858101 | + | 330 | WP_024749697.1 | transposase | - |
| CQW49_RS13670 () | 2858074..2858439 | - | 366 | WP_003613612.1 | hypothetical protein | - |
| CQW49_RS13675 () | 2858568..2861822 | - | 3255 | WP_003613611.1 | efflux RND transporter permease subunit | - |
| CQW49_RS13680 () | 2861819..2864941 | - | 3123 | WP_003613610.1 | efflux RND transporter permease subunit | - |
| CQW49_RS13685 () | 2864980..2866236 | - | 1257 | WP_003613609.1 | Multidrug resistance protein MdtA | VF |
| CQW49_RS13695 () | 2866619..2869096 | - | 2478 | WP_024749695.1 | TonB-dependent receptor | - |
| CQW49_RS13700 () | 2869257..2870186 | - | 930 | WP_003613603.1 | FecR family protein | - |
| CQW49_RS13705 () | 2870295..2870795 | - | 501 | WP_003613600.1 | sigma-70 family RNA polymerase sigma factor | - |
| CQW49_RS13710 () | 2870939..2871334 | - | 396 | WP_155931265.1 | hypothetical protein | - |
| CQW49_RS13720 () | 2871638..2874526 | - | 2889 | WP_003613595.1 | AMP-binding protein | - |
| CQW49_RS13725 () | 2874529..2875551 | - | 1023 | WP_024749692.1 | hypothetical protein | - |
| CQW49_RS13730 () | 2875533..2875712 | - | 180 | WP_003613590.1 | hypothetical protein | - |
| CQW49_RS13735 () | 2875839..2876816 | + | 978 | WP_210201044.1 | hypothetical protein | - |
| CQW49_RS13740 () | 2876941..2877372 | + | 432 | WP_003613588.1 | tail fiber domain-containing protein | - |
| CQW49_RS13745 () | 2877511..2878494 | + | 984 | WP_003613587.1 | hypothetical protein | - |
| CQW49_RS13750 () | 2878481..2881003 | + | 2523 | WP_003613586.1 | AMP-binding protein | - |
| CQW49_RS13755 () | 2881022..2881462 | - | 441 | WP_024749691.1 | protein TolR | - |
| CQW49_RS13760 () | 2881443..2882180 | - | 738 | WP_003616203.1 | MotA/TolQ/ExbB proton channel family protein | - |
| CQW49_RS13765 () | 2882223..2882981 | - | 759 | WP_155931264.1 | hypothetical protein | VF |
| CQW49_RS13770 () | 2883101..2883844 | - | 744 | WP_004448515.1 | cytochrome b/b6 domain-containing protein | - |
| CQW49_RS13775 () | 2883860..2884357 | - | 498 | WP_004448513.1 | cytochrome c | - |
| CQW49_RS13780 () | 2884383..2884949 | - | 567 | WP_004448511.1 | peroxiredoxin | - |
| CQW49_RS13785 () | 2884946..2885446 | - | 501 | WP_024749688.1 | sulfurtransferase | - |
| CQW49_RS13790 () | 2885491..2886381 | - | 891 | WP_004448507.1 | dienelactone hydrolase family protein | - |
| CQW49_RS13795 () | 2886399..2886812 | - | 414 | WP_051418704.1 | hypothetical protein | - |
| CQW49_RS13800 () | 2886952..2888403 | - | 1452 | WP_004448504.1 | DUF1501 domain-containing protein | - |
| CQW49_RS13805 () | 2888433..2890766 | - | 2334 | WP_004448502.1 | DUF1549 and DUF1553 domain-containing protein | - |
| CQW49_RS13810 () | 2891419..2891652 | + | 234 | WP_004448500.1 | TonB-dependent receptor | - |
| CQW49_RS13815 () | 2891897..2894008 | - | 2112 | WP_040567161.1 | glycosyltransferase family 41 protein | - |
| CQW49_RS13820 () | 2894513..2895373 | + | 861 | WP_004448496.1 | substrate-binding domain-containing protein | - |
| CQW49_RS13825 () | 2895427..2896317 | + | 891 | WP_004448495.1 | substrate-binding domain-containing protein | - |
| CQW49_RS13830 () | 2896486..2899770 | + | 3285 | WP_162150811.1 | hypothetical protein | VF |
| CQW49_RS13835 () | 2899847..2901571 | + | 1725 | WP_004448493.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| CQW49_RS13840 () | 2901629..2902339 | + | 711 | WP_004448492.1 | energy transducer TonB | - |
| CQW49_RS13845 () | 2902385..2902885 | - | 501 | WP_004448491.1 | DUF2852 domain-containing protein | - |
| CQW49_RS13850 () | 2903085..2904695 | + | 1611 | WP_004448490.1 | H(+)/Cl(-) exchange transporter ClcA | - |
| CQW49_RS13855 () | 2904716..2905216 | - | 501 | WP_004448488.1 | hypothetical protein | - |
| CQW49_RS13865 () | 2905728..2907074 | + | 1347 | WP_003616184.1 | IS1380 family transposase ISNha3 | Transposase |
| CQW49_RS13870 () | 2907241..2909088 | + | 1848 | Protein_2707 | acetate--CoA ligase | - |
| CQW49_RS13875 () | 2909069..2910316 | - | 1248 | WP_004448484.1 | acyltransferase | - |
| CQW49_RS13885 () | 2910688..2911581 | + | 894 | WP_004448482.1 | methylenetetrahydromethanopterin dehydrogenase | - |
| CQW49_RS13890 () | 2911761..2912780 | + | 1020 | WP_004448481.1 | H4MPT-linked C1 transfer pathway protein | - |
| CQW49_RS13895 () | 2913051..2914217 | - | 1167 | WP_051418702.1 | IS4 family transposase ISSysp3 | Transposase |
| CQW49_RS13900 () | 2914351..2914740 | - | 390 | WP_051418700.1 | ISAs1 family transposase ISRce1 | Transposase |
| CQW49_RS13905 () | 2914747..2915334 | - | 588 | WP_051418699.1 | ISAs1 family transposase ISAzs5 | Transposase |
| CQW49_RS13910 () | 2915389..2915715 | - | 327 | WP_024749684.1 | hypothetical protein | - |
| CQW49_RS13915 () | 2916545..2917753 | + | 1209 | WP_065083618.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CQW49_RS13920 () | 2917836..2920100 | - | 2265 | WP_003612131.1 | hypothetical protein | - |
| CQW49_RS13925 () | 2920097..2922648 | - | 2552 | Protein_2717 | hypothetical protein | - |
| CQW49_RS13930 () | 2922645..2923967 | - | 1323 | WP_003612128.1 | AAA family ATPase | - |
| CQW49_RS13935 () | 2923971..2924444 | - | 474 | WP_003612127.1 | hypothetical protein | - |
| CQW49_RS13940 () | 2924554..2926986 | - | 2433 | WP_003612126.1 | WD40 repeat domain-containing protein | - |
| CQW49_RS13945 () | 2927033..2927824 | - | 792 | WP_024749681.1 | hypothetical protein | - |
| CQW49_RS13955 () | 2928595..2931645 | + | 3051 | WP_003612121.1 | ATP-binding protein | - |
| CQW49_RS13960 () | 2931677..2932126 | + | 450 | WP_040567152.1 | hypothetical protein | - |
| CQW49_RS13965 () | 2932143..2935094 | + | 2952 | WP_003612117.1 | DUF1156 domain-containing protein | - |
| CQW49_RS13970 () | 2935091..2938237 | + | 3147 | WP_003612116.1 | DEAD/DEAH box helicase family protein | - |
| CQW49_RS13975 () | 2938343..2939305 | - | 963 | WP_003612113.1 | winged helix-turn-helix domain-containing protein | - |
| CQW49_RS24200 () | 2939306..2939971 | - | 666 | WP_003612111.1 | YqcI/YcgG family protein | - |
| CQW49_RS13980 () | 2939973..2940599 | - | 627 | WP_003612109.1 | HD domain-containing protein | - |
| CQW49_RS13985 () | 2940615..2942486 | - | 1872 | WP_003612108.1 | purine or other phosphorylase family 1 | - |
| CQW49_RS13990 () | 2942483..2943208 | - | 726 | WP_003612107.1 | methyltransferase domain-containing protein | - |
| CQW49_RS13995 () | 2943290..2943712 | - | 423 | WP_003612105.1 | hypothetical protein | - |
| CQW49_RS14000 () | 2943996..2945192 | + | 1197 | WP_099831794.1 | DUF932 domain-containing protein | - |
| CQW49_RS14005 () | 2945363..2947474 | + | 2112 | WP_003612103.1 | ParB/RepB/Spo0J family partition protein | - |
| CQW49_RS14010 () | 2947709..2952034 | + | 4326 | WP_003612100.1 | strawberry notch family protein | - |
| CQW49_RS14015 () | 2952036..2953097 | + | 1062 | WP_003612097.1 | toprim domain-containing protein | - |
| CQW49_RS14020 () | 2953426..2954364 | + | 939 | WP_003612094.1 | DUF2493 domain-containing protein | - |
| CQW49_RS14025 () | 2954439..2954671 | - | 233 | Protein_2737 | hypothetical protein | - |
| CQW49_RS25135 () | 2954952..2955125 | + | 174 | WP_003612090.1 | hypothetical protein | - |
| CQW49_RS14030 () | 2955268..2955708 | + | 441 | WP_003612088.1 | hypothetical protein | - |
| CQW49_RS14040 () | 2956296..2956622 | + | 327 | WP_003612087.1 | DUF736 domain-containing protein | - |
| CQW49_RS24645 () | 2956846..2957811 | + | 966 | WP_003612085.1 | hypothetical protein | - |
| CQW49_RS14045 () | 2957851..2958519 | - | 669 | WP_003612082.1 | DUF1353 domain-containing protein | - |
| CQW49_RS14050 () | 2958855..2959082 | - | 228 | WP_003612080.1 | helix-turn-helix transcriptional regulator | - |
| CQW49_RS14055 () | 2959310..2959573 | + | 264 | WP_003612077.1 | DUF2285 domain-containing protein | - |
| CQW49_RS14060 () | 2959712..2959921 | + | 210 | WP_003612076.1 | hypothetical protein | - |
| CQW49_RS14065 () | 2960091..2960495 | + | 405 | WP_003612075.1 | DUF2285 domain-containing protein | - |
| CQW49_RS14070 () | 2960668..2960952 | + | 285 | WP_003612074.1 | helix-turn-helix domain-containing protein | - |
| CQW49_RS14075 () | 2960965..2962131 | + | 1167 | WP_003612073.1 | replication initiator protein A | - |
| CQW49_RS14080 () | 2962128..2962766 | + | 639 | WP_003612072.1 | Iron-sulfur cluster carrier protein | VF |
| CQW49_RS14085 () | 2962822..2963076 | + | 255 | WP_003612071.1 | hypothetical protein | - |
| CQW49_RS14090 () | 2963073..2963591 | + | 519 | WP_003612069.1 | DUF2840 domain-containing protein | - |
| CQW49_RS14095 () | 2963588..2964133 | + | 546 | WP_003612067.1 | S26 family signal peptidase | - |
| CQW49_RS14100 () | 2964169..2964504 | + | 336 | WP_003612065.1 | DUF736 domain-containing protein | - |
| CQW49_RS14105 () | 2964509..2965285 | + | 777 | WP_003612064.1 | Membrane-bound lytic murein transglycosylase C | VF |
| CQW49_RS14110 () | 2965656..2967413 | + | 1758 | WP_003612062.1 | VirD2 family relaxase/mobilization nuclease | - |
| CQW49_RS14115 () | 2967560..2969539 | + | 1980 | WP_003612059.1 | hypothetical protein | VF |
| CQW49_RS14120 () | 2969549..2969992 | + | 444 | WP_003612056.1 | ribbon-helix-helix domain-containing protein | - |
| CQW49_RS14125 () | 2970130..2971116 | + | 987 | WP_024749676.1 | hypothetical protein | VF |
| CQW49_RS14130 () | 2971113..2971445 | + | 333 | WP_003612052.1 | TrbC/VirB2 family protein | - |
| CQW49_RS14135 () | 2971445..2971723 | + | 279 | WP_003612050.1 | VirB3 family type IV secretion system protein | - |
| CQW49_RS14140 () | 2971731..2974166 | + | 2436 | WP_003612048.1 | conjugal transfer protein TrbE | - |
| CQW49_RS14145 () | 2974166..2974909 | + | 744 | WP_003612047.1 | P-type conjugative transfer protein TrbJ | - |
| CQW49_RS14150 () | 2974918..2975232 | + | 315 | WP_003612046.1 | putative entry exclusion protein TrbK-alt | - |
| CQW49_RS14155 () | 2975229..2976566 | + | 1338 | WP_024749675.1 | P-type conjugative transfer protein TrbL | - |
| CQW49_RS14160 () | 2976570..2977253 | + | 684 | WP_003611952.1 | conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|