MGE detailed information
MGE type: Genomic_island MGE length: 70290 bp
Accession: NZ_CP023673 Location: 3890962..3961251 Organism: Escherichia coli strain SMN013SH2 Replicon: chromosome
Accession: NZ_CP023673 Location: 3890962..3961251 Organism: Escherichia coli strain SMN013SH2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP957_RS21320 () | 3886518..3887213 | - | 696 | WP_001364640.1 | lactate utilization protein C | - |
| CP957_RS21325 () | 3887206..3888633 | - | 1428 | WP_000023907.1 | iron-sulfur cluster-binding protein | - |
| CP957_RS21330 () | 3888644..3889363 | - | 720 | WP_001102129.1 | (Fe-S)-binding protein | - |
| CP957_RS21335 () | 3889882..3890736 | - | 855 | WP_000339589.1 | DNA-binding transcriptional regulator RclR | - |
| CP957_RS21340 () | 3890962..3892281 | + | 1320 | Protein_3911 | pyridine nucleotide-disulfide oxidoreductase | - |
| CP957_RS21345 () | 3892396..3892632 | + | 237 | WP_000474077.1 | DUF1471 domain-containing protein | - |
| CP957_RS21350 () | 3892644..3893237 | + | 594 | WP_096851651.1 | reactive chlorine species resistance protein RclC | - |
| CP957_RS21355 () | 3893397..3894266 | - | 870 | WP_001299025.1 | aldo/keto reductase | - |
| CP957_RS21360 () | 3894515..3895372 | + | 858 | WP_122994995.1 | Right origin-binding protein | VF |
| CP957_RS21365 () | 3895493..3899746 | - | 4254 | WP_024230918.1 | Invasin | VF |
| CP957_RS21370 () | 3900312..3901163 | + | 852 | WP_001174461.1 | aldo/keto reductase | - |
| CP957_RS21375 () | 3901190..3902179 | + | 990 | WP_001172290.1 | aldo/keto reductase | - |
| CP957_RS21380 () | 3902211..3903104 | - | 894 | WP_062881659.1 | HTH-type transcriptional regulator PgrR | VF |
| CP957_RS21385 () | 3903567..3903668 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| CP957_RS21395 () | 3904032..3904295 | + | 264 | WP_000803999.1 | type B 50S ribosomal protein L31 | - |
| CP957_RS21400 () | 3904295..3904435 | + | 141 | WP_024226489.1 | type B 50S ribosomal protein L36 | - |
| CP957_RS21405 () | 3904470..3904697 | - | 228 | WP_001147277.1 | hypothetical protein | - |
| CP957_RS29170 () | 3905520..3905639 | + | 120 | Protein_3924 | helix-turn-helix transcriptional regulator | - |
| CP957_RS21425 () | 3906408..3906836 | + | 429 | Protein_3926 | ECP biosynthesis operon DNA-binding transcriptional regulator EcpR | - |
| CP957_RS21430 () | 3906862..3907497 | + | 636 | WP_000150119.1 | Common pilus major fimbrillin subunit EcpA | VF |
| CP957_RS21435 () | 3907555..3908223 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| CP957_RS21440 () | 3908367..3908513 | - | 147 | Protein_3929 | AlpA family phage regulatory protein | - |
| CP957_RS21450 () | 3908942..3910156 | - | 1215 | WP_000772643.1 | Prophage integrase IntS ; Integrase | Integrase |
| CP957_RS21460 () | 3910533..3911852 | + | 1320 | WP_000144685.1 | Prophage integrase IntA ; Integrase | Integrase |
| CP957_RS21465 () | 3911945..3912793 | - | 849 | WP_001280444.1 | DUF4942 domain-containing protein | - |
| CP957_RS21475 () | 3913076..3914095 | - | 1020 | WP_000875212.1 | IS110 family transposase ISEc66 | Transposase |
| CP957_RS21480 () | 3914309..3914506 | - | 198 | WP_000839232.1 | DUF957 domain-containing protein | - |
| CP957_RS21485 () | 3914518..3915006 | - | 489 | WP_000761703.1 | hypothetical protein | - |
| CP957_RS21490 () | 3915003..3915380 | - | 378 | WP_001094440.1 | TA system toxin CbtA family protein | Toxin Detail |
| CP957_RS21495 () | 3915427..3915804 | - | 378 | WP_024166067.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CP957_RS21500 () | 3915879..3916100 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CP957_RS21505 () | 3916187..3916663 | - | 477 | WP_001367144.1 | RadC family protein | - |
| CP957_RS21510 () | 3916679..3917158 | - | 480 | WP_001449312.1 | antirestriction protein | - |
| CP957_RS21515 () | 3917252..3917497 | - | 246 | WP_000680583.1 | hypothetical protein | - |
| CP957_RS21520 () | 3917497..3918315 | - | 819 | WP_001234621.1 | DUF945 domain-containing protein | - |
| CP957_RS21530 () | 3918536..3918946 | - | 411 | WP_000846706.1 | hypothetical protein | - |
| CP957_RS21535 () | 3918962..3919645 | - | 684 | WP_000775504.1 | hypothetical protein | - |
| CP957_RS21540 () | 3919779..3920849 | - | 1071 | WP_000102618.1 | hypothetical protein | VF |
| CP957_RS21545 () | 3920846..3921751 | - | 906 | WP_000203548.1 | chemotaxis protein | - |
| CP957_RS21550 () | 3921748..3924132 | - | 2385 | WP_000544649.1 | dynamin family protein | - |
| CP957_RS21555 () | 3924350..3925194 | - | 845 | Protein_3948 | GTPase family protein | - |
| CP957_RS21560 () | 3925518..3926105 | + | 588 | WP_000521941.1 | hypothetical protein | - |
| CP957_RS21565 () | 3926437..3927063 | + | 627 | WP_000721150.1 | hypothetical protein | - |
| CP957_RS21570 () | 3927520..3927945 | + | 426 | WP_000422746.1 | IS66 family transposase ISEc23 | Transposase |
| CP957_RS21575 () | 3927942..3928292 | + | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| CP957_RS21580 () | 3928323..3929588 | + | 1266 | Protein_3953 | IS66 family transposase ISEc23 | Transposase |
| CP957_RS21585 () | 3929703..3930083 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CP957_RS21590 () | 3930080..3930427 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CP957_RS21595 () | 3930477..3932015 | + | 1539 | WP_000998072.1 | IS66 family transposase ISEc8 | Transposase |
| CP957_RS21600 () | 3932036..3932386 | + | 351 | Protein_3957 | IS66 family transposase ISEc49 | Transposase |
| CP957_RS21605 () | 3932521..3932748 | - | 228 | WP_000333617.1 | hypothetical protein | - |
| CP957_RS21610 () | 3932783..3933286 | - | 504 | WP_000885242.1 | CdiI family contact-dependent growth inhibition immunity protein | - |
| CP957_RS29460 () | 3933286..3933798 | - | 513 | WP_001501160.1 | hypothetical protein | - |
| CP957_RS29465 () | 3933771..3934128 | - | 358 | Protein_3961 | hemagglutinin | - |
| CP957_RS29470 () | 3934159..3934332 | - | 174 | Protein_3962 | VENN motif pre-toxin domain-containing protein | - |
| CP957_RS21620 () | 3934454..3934975 | - | 522 | WP_000017595.1 | DUF2569 domain-containing protein | - |
| CP957_RS21625 () | 3935239..3935514 | - | 276 | WP_000767171.1 | hypothetical protein | - |
| CP957_RS21630 () | 3935483..3936091 | - | 609 | WP_000410312.1 | hypothetical protein | - |
| CP957_RS21635 () | 3936322..3936576 | - | 255 | WP_000792318.1 | hypothetical protein | - |
| CP957_RS21640 () | 3936566..3936814 | - | 249 | WP_000501573.1 | IS91 family transposase ISVsa3 | Transposase |
| CP957_RS21645 () | 3937178..3937372 | + | 195 | WP_000232245.1 | hypothetical protein | - |
| CP957_RS21650 () | 3937362..3938138 | + | 777 | Protein_3969 | efflux RND transporter permease subunit | - |
| CP957_RS21660 () | 3938439..3939254 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| CP957_RS21665 () | 3939341..3939643 | + | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| CP957_RS21680 () | 3940027..3940863 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| CP957_RS21685 () | 3940863..3941666 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| CP957_RS21695 () | 3941952..3943160 | + | 1209 | WP_001303003.1 | IS4 family transposase IS10R | Transposase |
| CP957_RS21700 () | 3943170..3943541 | - | 372 | WP_035689358.1 | Transposon Tn10 TetD protein | VF |
| CP957_RS21705 () | 3943674..3944267 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CP957_RS21710 () | 3944380..3945585 | - | 1206 | WP_001089072.1 | Tetracycline resistance protein, class B | ARG |
| CP957_RS21715 () | 3945667..3946290 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| CP957_RS21720 () | 3946268..3946954 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CP957_RS21725 () | 3946962..3947348 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| CP957_RS21730 () | 3947341..3947661 | - | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CP957_RS21735 () | 3948105..3949310 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CP957_RS21740 () | 3949541..3949660 | + | 120 | Protein_3983 | LysR family transcriptional regulator | - |
| CP957_RS21745 () | 3949676..3950884 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CP957_RS21750 () | 3950988..3951125 | - | 138 | WP_000015617.1 | hypothetical protein | - |
| CP957_RS21755 () | 3951164..3951394 | - | 231 | WP_000765181.1 | hypothetical protein | - |
| CP957_RS21760 () | 3951391..3951879 | - | 489 | WP_000266539.1 | hypothetical protein | - |
| CP957_RS21765 () | 3952111..3952566 | - | 456 | WP_000990243.1 | hypothetical protein | - |
| CP957_RS21770 () | 3952571..3953080 | - | 510 | WP_001303001.1 | hypothetical protein | - |
| CP957_RS21775 () | 3953103..3953360 | - | 258 | WP_000877779.1 | hypothetical protein | - |
| CP957_RS21780 () | 3953357..3954691 | - | 1335 | Protein_3991 | VENN motif pre-toxin domain-containing protein | - |
| CP957_RS21785 () | 3954738..3955001 | - | 264 | WP_000118523.1 | hypothetical protein | - |
| CP957_RS21790 () | 3954998..3955852 | - | 855 | WP_001258566.1 | VENN motif pre-toxin domain-containing protein | - |
| CP957_RS29185 () | 3955922..3956335 | - | 414 | WP_000832132.1 | hypothetical protein | - |
| CP957_RS21795 () | 3956345..3956794 | - | 450 | WP_000912479.1 | hypothetical protein | - |
| CP957_RS21805 () | 3956977..3957354 | - | 378 | WP_001003689.1 | hypothetical protein | - |
| CP957_RS21810 () | 3957406..3958059 | - | 654 | WP_001477171.1 | Putative ribonuclease YeeF | VF |
| CP957_RS21820 () | 3958569..3959012 | - | 444 | WP_001449592.1 | hypothetical protein | - |
| CP957_RS21830 () | 3959425..3960282 | - | 858 | WP_001310368.1 | hypothetical protein | - |
| CP957_RS21835 () | 3960279..3960479 | - | 201 | WP_001449593.1 | VENN motif pre-toxin domain-containing protein | - |
| CP957_RS21840 () | 3960712..3961251 | - | 540 | WP_000779468.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|