MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 36748 bp
Accession: NZ_CP023673 Location: 3105476..3142223 Organism: Escherichia coli strain SMN013SH2 Replicon: chromosome
Accession: NZ_CP023673 Location: 3105476..3142223 Organism: Escherichia coli strain SMN013SH2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP957_RS17115 () | 3100865..3101137 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| CP957_RS17125 () | 3101393..3101608 | - | 216 | WP_024182511.1 | class II holin family protein | - |
| CP957_RS17130 () | 3101611..3103101 | - | 1491 | Protein_3147 | DUF1737 domain-containing protein | - |
| CP957_RS17135 () | 3103267..3104492 | + | 1226 | WP_101974181.1 | IS3-like element IS2 family transposase | - |
| CP957_RS17155 () | 3105132..3105434 | - | 303 | Protein_3149 | AraC family transcriptional regulator | - |
| CP957_RS17165 () | 3107082..3107855 | - | 774 | WP_062881813.1 | alpha/beta hydrolase | - |
| CP957_RS17170 () | 3108460..3108615 | + | 156 | WP_000813263.1 | type I toxin-antitoxin system toxin HokD | - |
| CP957_RS17175 () | 3108783..3109061 | + | 279 | WP_074433979.1 | hypothetical protein | - |
| CP957_RS17180 () | 3109063..3110112 | + | 1050 | WP_001265133.1 | DUF968 domain-containing protein | - |
| CP957_RS17185 () | 3110125..3110496 | + | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CP957_RS17190 () | 3110486..3110857 | + | 372 | WP_000090265.1 | antitermination protein | - |
| CP957_RS17195 () | 3111009..3111827 | + | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| CP957_RS17200 () | 3112114..3112311 | + | 198 | WP_000917737.1 | hypothetical protein | - |
| CP957_RS29410 () | 3112446..3112871 | + | 426 | WP_176465538.1 | hypothetical protein | - |
| CP957_RS17210 () | 3112858..3112953 | - | 96 | Protein_3160 | Rha family transcriptional regulator | - |
| CP957_RS17215 () | 3112937..3113209 | - | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| CP957_RS17220 () | 3113318..3113719 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| CP957_RS17225 () | 3113747..3113938 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| CP957_RS17230 () | 3113938..3114225 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP957_RS17235 () | 3114502..3114657 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CP957_RS17245 () | 3114799..3115188 | + | 390 | WP_032205089.1 | hypothetical protein | - |
| CP957_RS17250 () | 3115375..3115560 | - | 186 | WP_032205087.1 | hypothetical protein | - |
| CP957_RS17260 () | 3116134..3116322 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| CP957_RS17265 () | 3116319..3116510 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| CP957_RS17270 () | 3116604..3119054 | + | 2451 | WP_009448824.1 | exonuclease | - |
| CP957_RS17275 () | 3119122..3119364 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| CP957_RS17280 () | 3119342..3120361 | + | 1020 | WP_001299351.1 | hypothetical protein ; Integrase | Integrase |
| CP957_RS17285 () | 3120769..3121428 | + | 660 | WP_062882278.1 | FtsH protease modulator YccA | - |
| CP957_RS17290 () | 3121519..3121848 | + | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| CP957_RS17295 () | 3121845..3122123 | - | 279 | WP_000048252.1 | acylphosphatase | - |
| CP957_RS17300 () | 3122218..3123408 | + | 1191 | WP_062882280.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| CP957_RS17305 () | 3123466..3123783 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| CP957_RS17310 () | 3123828..3124241 | - | 414 | WP_001343235.1 | CoA-binding protein | - |
| CP957_RS17315 () | 3124414..3125076 | + | 663 | WP_060616790.1 | DUF2057 family protein | - |
| CP957_RS17320 () | 3125172..3125630 | + | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| CP957_RS17325 () | 3125662..3127716 | - | 2055 | WP_000420537.1 | DNA helicase IV | - |
| CP957_RS17330 () | 3127839..3128285 | + | 447 | WP_062882281.1 | YccF domain-containing protein | - |
| CP957_RS17335 () | 3128295..3130457 | + | 2163 | WP_074434046.1 | TIGR01666 family membrane protein | - |
| CP957_RS17340 () | 3130420..3131049 | - | 630 | WP_032186268.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| CP957_RS17345 () | 3131268..3131777 | + | 510 | WP_000288710.1 | cell division inhibitor SulA | - |
| CP957_RS17355 () | 3132134..3133174 | + | 1041 | WP_062882317.1 | Outer membrane protein A | VF |
| CP957_RS17360 () | 3133250..3133702 | - | 453 | WP_000877161.1 | macrodomain Ter protein MatP | - |
| CP957_RS17365 () | 3133888..3135648 | + | 1761 | WP_062882282.1 | Lon protease family protein | - |
| CP957_RS17370 () | 3135717..3136235 | + | 519 | WP_000227927.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| CP957_RS17375 () | 3136305..3136472 | - | 168 | WP_000828648.1 | ribosome modulation factor | - |
| CP957_RS17380 () | 3136728..3137291 | - | 564 | WP_000759129.1 | membrane integrity-associated transporter subunit PqiC | - |
| CP957_RS17385 () | 3137288..3138928 | - | 1641 | WP_000445561.1 | Paraquat-inducible protein B | VF |
| CP957_RS17390 () | 3138933..3140186 | - | 1254 | WP_062882283.1 | membrane integrity-associated transporter subunit PqiA | - |
| CP957_RS17395 () | 3140316..3142223 | - | 1908 | WP_062882284.1 | ABC transporter ATP-binding protein uup | VF |
| CP957_RS17400 () | 3142235..3144343 | - | 2109 | WP_096851640.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| CP957_RS17405 () | 3144587..3145696 | + | 1110 | WP_000224288.1 | 6-N-hydroxylaminopurine resistance protein YcbX | - |
| CP957_RS17410 () | 3145693..3146235 | - | 543 | WP_001295353.1 | cell division protein ZapC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|