MGE detailed information
MGE type: Prophage MGE length: 52692 bp
Accession: NZ_CP023673 Location: 2397210..2449901 Organism: Escherichia coli strain SMN013SH2 Replicon: chromosome
Accession: NZ_CP023673 Location: 2397210..2449901 Organism: Escherichia coli strain SMN013SH2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP957_RS13135 () | 2393109..2394329 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| CP957_RS13140 () | 2394454..2395149 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| CP957_RS13145 () | 2395102..2396394 | - | 1293 | Protein_2407 | voltage-gated ClC-type chloride channel ClcB | - |
| CP957_RS13150 () | 2396553..2397167 | - | 615 | WP_062881713.1 | Tat proofreading chaperone DmsD | - |
| CP957_RS13155 () | 2397210..2398064 | - | 855 | WP_000526488.1 | dimethyl sulfoxide reductase anchor subunit | - |
| CP957_RS13160 () | 2398066..2398683 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| CP957_RS13165 () | 2398694..2401117 | - | 2424 | WP_096851557.1 | dimethyl sulfoxide reductase subunit A | - |
| CP957_RS13170 () | 2401178..2403604 | - | 2427 | Protein_2412 | dimethyl sulfoxide reductase subunit A | - |
| CP957_RS13175 () | 2403803..2404108 | - | 306 | WP_062881712.1 | DUF1161 domain-containing protein | - |
| CP957_RS13180 () | 2404216..2404926 | + | 711 | WP_074433968.1 | YnfC family lipoprotein | - |
| CP957_RS13185 () | 2404929..2405489 | - | 561 | WP_062881710.1 | spermidine N1-acetyltransferase | - |
| CP957_RS13190 () | 2405524..2405865 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| CP957_RS13195 () | 2406000..2406326 | + | 327 | WP_001364742.1 | YnfA family protein | - |
| CP957_RS13205 () | 2406532..2407746 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CP957_RS13210 () | 2407758..2408342 | + | 585 | Protein_2419 | Zn-dependent oxidoreductase | - |
| CP957_RS13215 () | 2408434..2408814 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CP957_RS13220 () | 2408811..2409158 | + | 348 | WP_000612594.1 | IS66 family transposase ISEc8 | Transposase |
| CP957_RS13225 () | 2409208..2410341 | + | 1134 | Protein_2422 | hypothetical protein | VF |
| CP957_RS29320 () | 2410336..2410434 | + | 99 | Protein_2423 | hypothetical protein | VF |
| CP957_RS13235 () | 2411208..2411609 | + | 402 | Protein_2425 | type III secretion system effector kinase NleH1-2 | - |
| CP957_RS13240 () | 2411675..2412244 | + | 570 | WP_000938103.1 | Effector protein NleF | VF |
| CP957_RS13245 () | 2412291..2412925 | - | 635 | Protein_2427 | IS256 family transposase ISEic2 | Transposase |
| CP957_RS13250 () | 2413411..2413689 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| CP957_RS13255 () | 2414117..2414263 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| CP957_RS13260 () | 2414400..2415047 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| CP957_RS13265 () | 2415231..2415821 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| CP957_RS13270 () | 2416040..2417101 | - | 1062 | Protein_2432 | IS630 family transposase | - |
| CP957_RS29325 () | 2417333..2417983 | + | 651 | WP_169301324.1 | hypothetical protein | VF |
| CP957_RS13280 () | 2418154..2418389 | + | 236 | Protein_2434 | IS3 family transposase | - |
| CP957_RS13290 () | 2419209..2419286 | + | 78 | Protein_2435 | DUF551 domain-containing protein | - |
| CP957_RS13295 () | 2419402..2419506 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| CP957_RS13305 () | 2419753..2419908 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CP957_RS13310 () | 2420076..2420354 | + | 279 | WP_072184779.1 | hypothetical protein | - |
| CP957_RS13315 () | 2420356..2421405 | + | 1050 | WP_001265156.1 | DUF968 domain-containing protein | - |
| CP957_RS13320 () | 2421418..2421777 | + | 360 | WP_096851745.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CP957_RS13325 () | 2421774..2422463 | + | 690 | WP_096851746.1 | antiterminator | - |
| CP957_RS13330 () | 2422676..2422873 | + | 198 | WP_000917733.1 | hypothetical protein | - |
| CP957_RS13335 () | 2423025..2424082 | + | 1058 | Protein_2443 | site-specific DNA-methyltransferase | - |
| CP957_RS13345 () | 2424565..2424957 | + | 393 | Protein_2444 | tellurite resistance TerB family protein | - |
| CP957_RS28975 () | 2424954..2425206 | + | 253 | Protein_2445 | DUF3927 family protein | - |
| CP957_RS13355 () | 2425529..2427182 | + | 1654 | Protein_2446 | DUF1737 domain-containing protein | - |
| CP957_RS29330 () | 2427220..2427369 | + | 150 | WP_199770268.1 | hypothetical protein | - |
| CP957_RS13360 () | 2427357..2427937 | - | 581 | Protein_2448 | IS3 family transposase IS2 | Transposase |
| CP957_RS13365 () | 2428542..2430182 | + | 1641 | Protein_2449 | Methyl-accepting chemotaxis protein III | VF |
| CP957_RS13375 () | 2430220..2431143 | - | 924 | WP_000414564.1 | LysR family transcriptional regulator | - |
| CP957_RS13380 () | 2431360..2432703 | + | 1344 | WP_062881679.1 | VOC family protein | - |
| CP957_RS13390 () | 2432928..2434583 | + | 1656 | WP_062881680.1 | glucan biosynthesis protein OpgD | - |
| CP957_RS13400 () | 2434723..2434947 | + | 225 | WP_001296778.1 | YdcH family protein | - |
| CP957_RS13405 () | 2435010..2435546 | + | 537 | WP_000140884.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
| CP957_RS13410 () | 2435541..2436521 | - | 981 | WP_062881681.1 | LbetaH domain-containing protein | - |
| CP957_RS13415 () | 2436645..2437637 | + | 993 | WP_074433957.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| CP957_RS13420 () | 2437634..2438227 | + | 594 | WP_000586728.1 | tellurite resistance methyltransferase TehB | - |
| CP957_RS13425 () | 2438530..2439198 | + | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| CP957_RS13430 () | 2439216..2439722 | - | 507 | Protein_2459 | IS200-IS605 family transposase IS609 | Transposase |
| CP957_RS13435 () | 2439730..2440938 | + | 1209 | WP_074433958.1 | IS200-IS605 family transposase IS609 | Transposase |
| CP957_RS13440 () | 2440978..2442192 | - | 1215 | WP_071796541.1 | BenE family transporter YdcO | - |
| CP957_RS13445 () | 2442245..2442781 | + | 537 | WP_062881684.1 | DNA-binding transcriptional regulator SutR | - |
| CP957_RS13450 () | 2442854..2444815 | + | 1962 | WP_024177737.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| CP957_RS13455 () | 2444907..2445137 | - | 231 | WP_000494244.1 | YncJ family protein | - |
| CP957_RS13460 () | 2445359..2445535 | + | 177 | WP_032195248.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| CP957_RS13465 () | 2445581..2445997 | + | 417 | WP_077879189.1 | type II toxin-antitoxin system antitoxin HicB | Antitoxin Detail |
| CP957_RS13470 () | 2446076..2447482 | + | 1407 | WP_000760615.1 | PLP-dependent aminotransferase family protein | - |
| CP957_RS13475 () | 2447727..2448872 | + | 1146 | WP_000047456.1 | ABC transporter substrate-binding protein | - |
| CP957_RS13480 () | 2448924..2449901 | + | 978 | WP_095585825.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CP957_RS13485 () | 2449902..2450843 | + | 942 | WP_001251313.1 | ABC transporter permease | - |
| CP957_RS13490 () | 2450833..2451626 | + | 794 | Protein_2471 | ABC transporter permease | - |
| CP957_RS13495 () | 2451648..2453072 | + | 1425 | WP_062881687.1 | aminobutyraldehyde dehydrogenase | - |
| CP957_RS13500 () | 2453282..2454091 | + | 810 | WP_000867982.1 | CatB-related O-acetyltransferase | - |
| CP957_RS13505 () | 2454493..2454588 | - | 96 | WP_001303494.1 | stress response membrane protein YncL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|