MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 214673 bp
Accession: NZ_CP023646 Location: 1..214673 Organism: Shigella sonnei strain CFSAN030807 Replicon: plasmid pCFSAN030807_1
Accession: NZ_CP023646 Location: 1..214673 Organism: Shigella sonnei strain CFSAN030807 Replicon: plasmid pCFSAN030807_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT852_RS26450 (AT852_26450) | 537..668 | + | 132 | Protein_1 | IS1 family transposase | - |
| AT852_RS26455 (AT852_26455) | 694..2841 | + | 2148 | WP_050899818.1 | type IV conjugative transfer system coupling protein TraD | - |
| AT852_RS26460 (AT852_26460) | 2850..3248 | - | 399 | WP_000911318.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AT852_RS26465 (AT852_26465) | 3248..3475 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| AT852_RS26470 (AT852_26470) | 3557..7828 | + | 4272 | Protein_5 | Multifunctional conjugation protein TraI | Relaxase |
| AT852_RS26475 (AT852_26475) | 7897..9053 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| AT852_RS26480 (AT852_26480) | 9099..10094 | + | 996 | Protein_7 | Multifunctional conjugation protein TraI | Relaxase |
| AT852_RS26485 (AT852_26485) | 10114..10861 | + | 748 | Protein_8 | conjugal transfer pilus acetylase TraX | - |
| AT852_RS26490 (AT852_26490) | 10916..11476 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| AT852_RS26495 (AT852_26495) | 11606..11818 | + | 213 | WP_004971339.1 | ANR family transcriptional regulator | - |
| AT852_RS26500 (AT852_26500) | 12062..12523 | + | 462 | WP_001233865.1 | thermonuclease family protein | - |
| AT852_RS26505 (AT852_26505) | 12569..12778 | + | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| AT852_RS26510 (AT852_26510) | 12817..13062 | + | 246 | Protein_13 | hypothetical protein | - |
| AT852_RS26525 (AT852_26525) | 13831..14184 | + | 354 | Protein_15 | DUF2726 domain-containing protein | - |
| AT852_RS26530 (AT852_26530) | 14424..14684 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| AT852_RS26540 (AT852_26540) | 14908..14982 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AT852_RS26545 (AT852_26545) | 14975..15832 | + | 858 | WP_000130974.1 | incFII family plasmid replication initiator RepA | - |
| AT852_RS29025 (AT852_26555) | 16532..16723 | + | 192 | WP_000829591.1 | hypothetical protein | - |
| AT852_RS26560 (AT852_26560) | 16796..17047 | + | 252 | WP_001132903.1 | plasmid stabilization protein | Antitoxin Detail |
| AT852_RS26565 (AT852_26565) | 17044..17331 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AT852_RS26570 (AT852_26570) | 17564..18763 | - | 1200 | WP_000947184.1 | IS91 family transposase | - |
| AT852_RS29030 (AT852_26575) | 18773..18961 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| AT852_RS26580 (AT852_26580) | 19083..19241 | + | 159 | Protein_24 | transposase | - |
| AT852_RS26585 (AT852_26585) | 19380..19535 | + | 156 | Protein_25 | IS256 family transposase ISEc39 | Transposase |
| AT852_RS26590 (AT852_26590) | 19565..21292 | - | 1728 | WP_000597732.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| AT852_RS26595 (AT852_26595) | 21682..21901 | - | 220 | Protein_27 | hypothetical protein | - |
| AT852_RS26600 (AT852_26600) | 22058..22155 | - | 98 | Protein_28 | IS1 family transposase | - |
| AT852_RS26605 (AT852_26605) | 22342..23529 | - | 1188 | WP_000937570.1 | IS91 family transposase ISEc37 | Transposase |
| AT852_RS26610 (AT852_26610) | 23529..23714 | - | 186 | WP_000338652.1 | hypothetical protein | - |
| AT852_RS28430 | 24985..25161 | - | 177 | WP_000124109.1 | hypothetical protein | - |
| AT852_RS26620 (AT852_26620) | 25229..25375 | + | 147 | Protein_33 | IS630 family transposase | - |
| AT852_RS26625 (AT852_26625) | 25548..26756 | - | 1209 | WP_000198535.1 | IS91 family transposase | - |
| AT852_RS26630 (AT852_26630) | 26737..27009 | - | 273 | WP_011310366.1 | hypothetical protein | - |
| AT852_RS26635 (AT852_26635) | 27003..27278 | + | 276 | WP_000219641.1 | IS630 family transposase IS630 | Transposase |
| AT852_RS26640 (AT852_26640) | 27627..28733 | + | 1107 | WP_000030546.1 | Wzz/FepE/Etk N-terminal domain-containing protein | - |
| AT852_RS26645 (AT852_26645) | 28802..30082 | + | 1281 | WP_005138823.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| AT852_RS26650 (AT852_26650) | 30175..31200 | + | 1026 | WP_000092504.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| AT852_RS26655 (AT852_26655) | 31289..32569 | + | 1281 | WP_112324963.1 | oligosaccharide flippase family protein | - |
| AT852_RS26660 (AT852_26660) | 32704..33810 | + | 1107 | WP_157699633.1 | O-antigen ligase family protein | - |
| AT852_RS26665 (AT852_26665) | 33907..34938 | + | 1032 | WP_005137849.1 | IS630 family transposase IS630 | Transposase |
| AT852_RS26670 (AT852_26670) | 34971..36215 | + | 1245 | WP_000923778.1 | UDP-GalNAcA C5 epimerase WbgV | - |
| AT852_RS26675 (AT852_26675) | 36208..37194 | + | 987 | WP_001286236.1 | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase | VF |
| AT852_RS26680 (AT852_26680) | 37191..38345 | + | 1155 | WP_000787663.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| AT852_RS26685 (AT852_26685) | 38362..38952 | + | 591 | WP_000821043.1 | UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase | VF |
| AT852_RS26690 (AT852_26690) | 38967..40886 | + | 1920 | WP_005143902.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| AT852_RS26695 (AT852_26695) | 41005..41506 | + | 502 | Protein_48 | aquaporin Z | - |
| AT852_RS26705 (AT852_26705) | 41670..42076 | + | 407 | Protein_49 | IS3 family transposase IS629 | Transposase |
| AT852_RS26710 (AT852_26710) | 42118..42342 | - | 225 | Protein_50 | helix-turn-helix domain-containing protein | - |
| AT852_RS26715 (AT852_26715) | 42531..43718 | - | 1188 | WP_000937570.1 | IS91 family transposase ISEc37 | Transposase |
| AT852_RS26720 (AT852_26720) | 43718..44083 | - | 366 | WP_000124126.1 | hypothetical protein | - |
| AT852_RS26725 (AT852_26725) | 44172..44987 | + | 816 | Protein_53 | IS3 family transposase ISLad1 | Transposase |
| AT852_RS26730 (AT852_26730) | 45011..45703 | - | 693 | WP_000625270.1 | hypothetical protein | VF |
| AT852_RS26735 (AT852_26735) | 45759..45911 | + | 153 | Protein_55 | IS3 family transposase | - |
| AT852_RS26740 (AT852_26740) | 46193..46330 | - | 138 | WP_011378983.1 | hypothetical protein | - |
| AT852_RS26745 (AT852_26745) | 47293..48240 | + | 948 | WP_005000190.1 | Outer membrane protease IcsP | VF |
| AT852_RS26755 (AT852_26755) | 48802..49174 | - | 373 | Protein_58 | integrase core domain-containing protein | - |
| AT852_RS28435 | 49418..49537 | + | 120 | Protein_59 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| AT852_RS26770 (AT852_26770) | 49787..50653 | + | 867 | WP_001046939.1 | hypothetical protein | VF |
| AT852_RS26775 (AT852_26775) | 50982..51722 | + | 741 | WP_000850661.1 | PAP2 family phosphatase PhoN2 | - |
| AT852_RS29280 | 51795..51917 | + | 123 | WP_000537156.1 | IS3 family transposase IS629 | Transposase |
| AT852_RS26780 (AT852_26780) | 52075..52239 | - | 165 | Protein_63 | T3SS effector OspC family protein | - |
| AT852_RS26785 (AT852_26785) | 52340..53371 | + | 1032 | WP_005137849.1 | IS630 family transposase IS630 | Transposase |
| AT852_RS26790 (AT852_26790) | 53392..53868 | - | 477 | Protein_65 | hypothetical protein | VF |
| AT852_RS26800 (AT852_26800) | 54102..55811 | - | 1710 | WP_004976019.1 | hypothetical protein | VF |
| AT852_RS26805 (AT852_26805) | 56243..56962 | - | 720 | WP_001121863.1 | Phosphothreonine lyase OspF | VF |
| AT852_RS26810 (AT852_26810) | 57087..57650 | - | 564 | Protein_68 | ISL3 family transposase ISKox3 | Transposase |
| AT852_RS26815 (AT852_26815) | 57634..57892 | + | 259 | Protein_69 | IS1 family transposase | - |
| AT852_RS26820 (AT852_26820) | 58001..58579 | - | 579 | WP_000868562.1 | hypothetical protein | - |
| AT852_RS29035 | 58633..58891 | - | 259 | Protein_71 | integrase core domain-containing protein | - |
| AT852_RS29040 | 59005..59124 | - | 120 | Protein_72 | AAA family ATPase | - |
| AT852_RS26830 (AT852_26830) | 59241..60272 | + | 1032 | WP_011310406.1 | IS630 family transposase IS630 | Transposase |
| AT852_RS26835 (AT852_26835) | 60290..60397 | - | 108 | Protein_74 | ATP-binding protein | - |
| AT852_RS26840 (AT852_26840) | 60584..61013 | - | 430 | Protein_75 | transposase | - |
| AT852_RS26845 (AT852_26845) | 61061..61246 | - | 186 | WP_000338650.1 | hypothetical protein | - |
| AT852_RS29045 (AT852_26850) | 61409..61690 | + | 282 | Protein_77 | IS66 family transposase ISCro1 | Transposase |
| AT852_RS26855 (AT852_26855) | 61704..62327 | - | 624 | Protein_78 | IS4 family transposase IS4 | Transposase |
| AT852_RS28445 | 62330..62404 | + | 75 | Protein_79 | IS66 family insertion sequence element accessory protein TnpB | - |
| AT852_RS26865 (AT852_26865) | 62404..62751 | + | 348 | WP_000622995.1 | IS66 family transposase ISCro1 | Transposase |
| AT852_RS26870 (AT852_26870) | 62771..63925 | + | 1155 | Protein_81 | IS66 family transposase ISCro1 | Transposase |
| AT852_RS26875 (AT852_26875) | 63929..64088 | + | 160 | Protein_82 | IS3 family transposase | - |
| AT852_RS29285 | 64677..64811 | + | 135 | WP_005064863.1 | IS256 family transposase ISEic2 | Transposase |
| AT852_RS28450 | 64808..64978 | + | 171 | WP_005031035.1 | IS256 family transposase IS1414 | Transposase |
| AT852_RS26880 (AT852_26880) | 65057..65194 | + | 138 | Protein_85 | IS630 family transposase | - |
| AT852_RS26885 (AT852_26885) | 65565..66242 | + | 678 | WP_011310404.1 | hypothetical protein | VF |
| AT852_RS29055 | 66563..66676 | + | 114 | Protein_87 | IS3 family transposase | - |
| AT852_RS29060 | 66754..67068 | + | 315 | WP_011114726.1 | hypothetical protein | - |
| AT852_RS26900 (AT852_26900) | 67351..67917 | + | 567 | WP_011310403.1 | hypothetical protein | VF |
| AT852_RS29065 (AT852_26905) | 68179..68301 | - | 123 | Protein_90 | transposase domain-containing protein | - |
| AT852_RS26910 (AT852_26910) | 68489..69654 | + | 1166 | WP_087880379.1 | IS3 family transposase IS3H | Transposase |
| AT852_RS26915 (AT852_26915) | 69994..70355 | + | 362 | Protein_92 | IS1 family transposase IS1N | Transposase |
| AT852_RS26925 (AT852_26925) | 70442..71446 | + | 1005 | WP_000255972.1 | IS21 family transposase IS100kyp | Transposase |
| AT852_RS26930 (AT852_26930) | 71638..72834 | + | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| AT852_RS26940 (AT852_26940) | 73108..74235 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| AT852_RS26945 (AT852_26945) | 74421..74498 | + | 78 | Protein_96 | hypothetical protein | - |
| AT852_RS26950 (AT852_26950) | 74565..74918 | + | 354 | Protein_97 | IS1 family transposase | - |
| AT852_RS26955 (AT852_26955) | 74932..75066 | + | 135 | Protein_98 | hypothetical protein | - |
| AT852_RS26960 (AT852_26960) | 75240..76439 | + | 1200 | WP_000200287.1 | AAA family ATPase | - |
| AT852_RS26965 (AT852_26965) | 76439..77419 | + | 981 | WP_000431556.1 | ParB family protein | - |
| AT852_RS26970 (AT852_26970) | 77675..78160 | + | 486 | WP_000003222.1 | IS110 family transposase ISSde4 | Transposase |
| AT852_RS26975 (AT852_26975) | 78187..78366 | - | 180 | Protein_102 | transposase domain-containing protein | - |
| AT852_RS29070 | 78449..78976 | - | 528 | WP_107367734.1 | group II intron maturase-specific domain-containing protein | - |
| AT852_RS29075 | 78991..79497 | - | 507 | WP_216084289.1 | reverse transcriptase domain-containing protein | - |
| AT852_RS29080 | 79440..79834 | + | 395 | Protein_105 | hypothetical protein | - |
| AT852_RS26990 (AT852_26990) | 80204..81376 | + | 1173 | WP_000952382.1 | IS21 family transposase IS21 | Transposase |
| AT852_RS26995 (AT852_26995) | 81376..82173 | + | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| AT852_RS27000 (AT852_27000) | 82285..82464 | - | 180 | Protein_108 | transposase | - |
| AT852_RS27010 (AT852_27010) | 82501..83714 | - | 1214 | Protein_109 | IS3 family transposase IS629 | Transposase |
| AT852_RS27015 (AT852_27015) | 83768..84067 | - | 300 | Protein_110 | DDE-type integrase/transposase/recombinase | - |
| AT852_RS29085 (AT852_27020) | 84183..84371 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| AT852_RS27025 (AT852_27025) | 84381..85580 | + | 1200 | WP_000947184.1 | IS91 family transposase | - |
| AT852_RS29090 | 85753..85839 | + | 87 | Protein_113 | IS21 family transposase IS100 | Transposase |
| AT852_RS27035 (AT852_27035) | 85835..86623 | - | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| AT852_RS27040 (AT852_27040) | 87122..88249 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| AT852_RS27050 (AT852_27050) | 88572..88970 | + | 399 | Protein_116 | integrase core domain-containing protein | - |
| AT852_RS27055 (AT852_27055) | 89152..89418 | + | 267 | WP_000957713.1 | hypothetical protein | VF |
| AT852_RS27060 (AT852_27060) | 89789..90895 | - | 1107 | Protein_118 | IS110 family transposase ISSfl4 | Transposase |
| AT852_RS27065 (AT852_27065) | 90974..91246 | + | 273 | WP_011310366.1 | hypothetical protein | - |
| AT852_RS27070 (AT852_27070) | 91227..92435 | + | 1209 | WP_000198535.1 | IS91 family transposase | - |
| AT852_RS27075 (AT852_27075) | 92606..92758 | + | 153 | WP_000994090.1 | hypothetical protein | - |
| AT852_RS27080 (AT852_27080) | 92827..92889 | - | 63 | Protein_122 | IS66 family insertion sequence element accessory protein TnpB | - |
| AT852_RS27085 (AT852_27085) | 93340..94752 | + | 1413 | WP_001026853.1 | hypothetical protein | VF |
| AT852_RS27090 (AT852_27090) | 94856..95005 | - | 150 | Protein_124 | IS1 family transposase | - |
| AT852_RS27095 (AT852_27095) | 95081..96778 | + | 1698 | WP_011310400.1 | hypothetical protein | VF |
| AT852_RS27105 (AT852_27105) | 96949..97898 | - | 950 | Protein_126 | IS3 family transposase ISSd1 | Transposase |
| AT852_RS27110 (AT852_27110) | 97937..98404 | + | 468 | WP_011310398.1 | CFA/I fimbrial subunit D | VF |
| AT852_RS27115 (AT852_27115) | 98556..98818 | + | 263 | Protein_128 | recombinase family protein | - |
| AT852_RS27120 (AT852_27120) | 98844..99709 | + | 866 | WP_094099912.1 | IS5 family transposase ISSfl7 | Transposase |
| AT852_RS27125 (AT852_27125) | 99824..100855 | + | 1032 | WP_005136263.1 | IS630 family transposase IS630 | Transposase |
| AT852_RS29095 | 100878..100970 | - | 93 | Protein_131 | hypothetical protein | - |
| AT852_RS27135 (AT852_27135) | 101049..101747 | + | 699 | Protein_132 | IS1 family transposase | - |
| AT852_RS27140 (AT852_27140) | 101764..101943 | - | 180 | Protein_133 | transposase | - |
| AT852_RS27145 (AT852_27145) | 102272..103969 | + | 1698 | WP_011310397.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| AT852_RS27150 (AT852_27150) | 104397..106121 | + | 1725 | WP_011310396.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| AT852_RS27155 (AT852_27155) | 106173..107386 | + | 1214 | Protein_136 | IS3 family transposase IS629 | Transposase |
| AT852_RS29100 (AT852_27165) | 107741..107929 | + | 189 | WP_000957853.1 | hypothetical protein | - |
| AT852_RS27170 (AT852_27170) | 107939..109138 | + | 1200 | WP_000947184.1 | IS91 family transposase | - |
| AT852_RS27175 (AT852_27175) | 109316..110160 | + | 845 | WP_086021023.1 | IS5-like element ISSfl7 family transposase | - |
| AT852_RS27180 (AT852_27180) | 110309..111763 | - | 1455 | WP_000701109.1 | hypothetical protein | VF |
| AT852_RS27185 (AT852_27185) | 112188..112451 | + | 264 | Protein_141 | IS5 family transposase | - |
| AT852_RS27200 (AT852_27200) | 112513..113210 | + | 698 | WP_094096600.1 | IS1 family transposase IS1S | Transposase |
| AT852_RS27205 (AT852_27205) | 113294..113656 | + | 363 | WP_000336830.1 | transposase | - |
| AT852_RS27210 (AT852_27210) | 113821..115029 | - | 1209 | WP_000198534.1 | IS91 family transposase | - |
| AT852_RS27215 (AT852_27215) | 115010..115282 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| AT852_RS27220 (AT852_27220) | 115365..115889 | - | 525 | Protein_146 | IS66 family transposase ISSfl3 | Transposase |
| AT852_RS27225 (AT852_27225) | 116305..117759 | + | 1455 | WP_000701114.1 | hypothetical protein | VF |
| AT852_RS27235 (AT852_27235) | 118097..119253 | + | 1157 | WP_094096726.1 | IS3 family transposase IS600 | Transposase |
| AT852_RS27240 (AT852_27240) | 119294..120097 | + | 804 | Protein_149 | IS3 family transposase ISKpn38 | Transposase |
| AT852_RS27245 (AT852_27245) | 120212..120553 | + | 342 | Protein_150 | IS21 family transposase ISEc62 | Transposase |
| AT852_RS27250 (AT852_27250) | 120511..120994 | + | 484 | Protein_151 | IS4 family transposase ISEc13 | Transposase |
| AT852_RS27265 (AT852_27265) | 122484..123680 | - | 1197 | WP_000140459.1 | IS110 family transposase ISEc20 | Transposase |
| AT852_RS27270 (AT852_27270) | 123872..124876 | - | 1005 | WP_000255972.1 | IS21 family transposase IS100kyp | Transposase |
| AT852_RS29105 | 125223..126032 | + | 810 | Protein_155 | IS110 family transposase | - |
| AT852_RS27285 (AT852_27285) | 126229..127008 | + | 780 | WP_005059304.1 | Cysteine protease IpaJ | VF |
| AT852_RS27295 (AT852_27295) | 127954..128883 | - | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| AT852_RS27300 (AT852_27300) | 129100..129336 | - | 237 | WP_000588812.1 | Acyl carrier protein | VF |
| AT852_RS27305 (AT852_27305) | 129340..131241 | - | 1902 | WP_005142044.1 | Invasin IpaA | VF |
| AT852_RS27310 (AT852_27310) | 131250..132248 | - | 999 | WP_001028033.1 | Invasin IpaD | VF |
| AT852_RS27315 (AT852_27315) | 132299..133390 | - | 1092 | WP_000405478.1 | Invasin IpaC | VF |
| AT852_RS27320 (AT852_27320) | 133410..135152 | - | 1743 | WP_000552060.1 | Invasin IpaB | VF |
| AT852_RS27325 (AT852_27325) | 135158..135625 | - | 468 | WP_000055835.1 | Chaperone protein IpgC | VF |
| AT852_RS27330 (AT852_27330) | 135683..136309 | - | 627 | WP_001166525.1 | hypothetical protein | VF |
| AT852_RS27335 (AT852_27335) | 136325..136714 | - | 390 | WP_010921664.1 | hypothetical protein | VF |
| AT852_RS27340 (AT852_27340) | 136727..138211 | - | 1485 | WP_000601047.1 | hypothetical protein | VF |
| AT852_RS27350 (AT852_27350) | 138525..140141 | + | 1617 | WP_000548325.1 | Inositol phosphate phosphatase IpgD | VF |
| AT852_RS27355 (AT852_27355) | 140151..140513 | + | 363 | WP_000389732.1 | Chaperone protein IpgE | VF |
| AT852_RS27360 (AT852_27360) | 140513..140971 | + | 459 | WP_000086108.1 | hypothetical protein | VF |
| AT852_RS27365 (AT852_27365) | 140980..142095 | + | 1116 | WP_001287353.1 | Protein MxiG | VF |
| AT852_RS27370 (AT852_27370) | 142103..142354 | + | 252 | WP_010921669.1 | Protein MxiH | VF |
| AT852_RS27375 (AT852_27375) | 142367..142660 | + | 294 | WP_001106823.1 | hypothetical protein | VF |
| AT852_RS27380 (AT852_27380) | 142666..143391 | + | 726 | WP_000621940.1 | Lipoprotein PrgK | VF |
| AT852_RS27385 (AT852_27385) | 143388..143915 | + | 528 | WP_000620627.1 | Oxygen-regulated invasion protein OrgA | VF |
| AT852_RS27390 (AT852_27390) | 143857..144552 | + | 696 | WP_011310390.1 | Oxygen-regulated invasion protein OrgB | VF |
| AT852_RS27395 (AT852_27395) | 144545..144952 | + | 408 | WP_000609862.1 | hypothetical protein | VF |
| AT852_RS27400 (AT852_27400) | 144936..145364 | + | 429 | WP_001346200.1 | Lipoprotein MxiM | VF |
| AT852_RS27405 (AT852_27405) | 145494..146126 | + | 633 | WP_000398259.1 | Invasion protein InvF | VF |
| AT852_RS27410 (AT852_27410) | 146113..147813 | + | 1701 | WP_050899888.1 | Outer membrane protein MxiD | VF |
| AT852_RS27415 (AT852_27415) | 147832..148899 | + | 1068 | WP_000887828.1 | Protein MxiC | VF |
| AT852_RS27420 (AT852_27420) | 148912..150972 | + | 2061 | WP_000616104.1 | Protein MxiA | VF |
| AT852_RS27425 (AT852_27425) | 150985..151386 | + | 402 | WP_000065501.1 | Surface presentation of antigens protein SpaK | VF |
| AT852_RS27430 (AT852_27430) | 151390..152682 | + | 1293 | WP_000122615.1 | putative ATP synthase SpaL/MxiB | VF |
| AT852_RS27435 (AT852_27435) | 152775..153113 | + | 339 | WP_000387670.1 | hypothetical protein | VF |
| AT852_RS27440 (AT852_27440) | 153100..153978 | + | 879 | WP_001162455.1 | Surface presentation of antigens protein SpaN | VF |
| AT852_RS27445 (AT852_27445) | 153972..154853 | + | 882 | WP_000944309.1 | Surface presentation of antigens protein SpaO | VF |
| AT852_RS27450 (AT852_27450) | 154858..155508 | + | 651 | WP_000947540.1 | Surface presentation of antigens protein SpaP | VF |
| AT852_RS27455 (AT852_27455) | 155523..155783 | + | 261 | WP_001280545.1 | hypothetical protein | VF |
| AT852_RS27460 (AT852_27460) | 155783..156553 | + | 771 | WP_000355395.1 | Surface presentation of antigens protein SpaR | VF |
| AT852_RS27465 (AT852_27465) | 156560..157588 | + | 1029 | WP_001284685.1 | Surface presentation of antigens protein SpaS | VF |
| AT852_RS27470 (AT852_27470) | 157610..157843 | + | 234 | WP_000538708.1 | biofilm/acid-resistance regulator YmgB/AriR | - |
| AT852_RS27475 (AT852_27475) | 158450..159483 | - | 1034 | Protein_192 | IS3 family transposase ISSfl11 | Transposase |
| AT852_RS27480 (AT852_27480) | 159772..161307 | + | 1536 | WP_059309805.1 | IS21 family transposase ISSso4 | Transposase |
| AT852_RS27485 (AT852_27485) | 161324..162079 | + | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| AT852_RS27490 (AT852_27490) | 162193..162402 | + | 210 | Protein_195 | IS3 family transposase IS600 | Transposase |
| AT852_RS27495 (AT852_27495) | 162444..163078 | - | 635 | Protein_196 | IS3 family transposase IS3H | Transposase |
| AT852_RS29110 (AT852_27500) | 163141..163545 | - | 405 | WP_011114759.1 | hypothetical protein | - |
| AT852_RS27505 (AT852_27505) | 163735..163863 | - | 129 | Protein_198 | IS630 family transposase ISSpu2 | Transposase |
| AT852_RS27510 (AT852_27510) | 164097..164813 | - | 717 | WP_005142026.1 | hypothetical protein | - |
| AT852_RS27525 (AT852_27525) | 165398..165799 | - | 402 | Protein_200 | transposase | - |
| AT852_RS27530 (AT852_27530) | 165829..166290 | - | 462 | Protein_201 | ISL3 family transposase ISKox3 | Transposase |
| AT852_RS27535 (AT852_27535) | 166343..167091 | + | 749 | Protein_202 | IS3 family transposase IS629 | Transposase |
| AT852_RS27540 (AT852_27540) | 167195..168367 | + | 1173 | WP_000952382.1 | IS21 family transposase IS21 | Transposase |
| AT852_RS27545 (AT852_27545) | 168367..169164 | + | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| AT852_RS27550 (AT852_27550) | 169217..169690 | + | 474 | Protein_205 | IS3 family transposase IS629 | Transposase |
| AT852_RS27555 (AT852_27555) | 169717..169866 | - | 150 | Protein_206 | transposase | - |
| AT852_RS27560 (AT852_27560) | 170047..170476 | - | 430 | Protein_207 | IS91 family transposase IS91 | Transposase |
| AT852_RS27565 (AT852_27565) | 170524..170889 | - | 366 | WP_000124084.1 | hypothetical protein | - |
| AT852_RS29115 | 171642..172040 | - | 399 | Protein_209 | reverse transcriptase/maturase family protein | - |
| AT852_RS27580 (AT852_27580) | 172043..172409 | - | 367 | Protein_210 | IS3 family transposase IS3F | Transposase |
| AT852_RS27585 (AT852_27585) | 172411..173098 | - | 688 | Protein_211 | IS3 family transposase IS629 | Transposase |
| AT852_RS27590 (AT852_27590) | 173277..174479 | - | 1203 | WP_001195010.1 | Cysteine protease-like VirA | VF |
| AT852_RS27595 (AT852_27595) | 175008..178316 | + | 3309 | WP_001071791.1 | Outer membrane protein IcsA autotransporter | VF |
| AT852_RS27600 (AT852_27600) | 178460..178778 | + | 319 | Protein_214 | Outer membrane usher protein PapC | VF |
| AT852_RS27605 (AT852_27605) | 178951..180154 | + | 1204 | Protein_215 | IS3 family transposase IS629 | Transposase |
| AT852_RS27610 (AT852_27610) | 180495..182147 | + | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| AT852_RS27615 (AT852_27615) | 182158..182328 | - | 171 | Protein_217 | transposase | - |
| AT852_RS29120 (AT852_27620) | 182461..182580 | - | 120 | Protein_218 | transposase domain-containing protein | - |
| AT852_RS29125 | 182654..182956 | - | 303 | WP_225620366.1 | group II intron maturase-specific domain-containing protein | - |
| AT852_RS27630 (AT852_27630) | 183265..184607 | - | 1343 | Protein_220 | group II intron reverse transcriptase/maturase | - |
| AT852_RS29130 | 184638..184853 | - | 216 | Protein_221 | IS3 family transposase ISSfl10 | Transposase |
| AT852_RS27640 (AT852_27640) | 186278..186547 | - | 270 | Protein_223 | IS3 family transposase ISEc48 | Transposase |
| AT852_RS29135 | 186662..187300 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| AT852_RS27650 (AT852_27650) | 187459..187929 | - | 471 | Protein_225 | IS1 family transposase IS1N | Transposase |
| AT852_RS27655 (AT852_27655) | 188265..188450 | + | 186 | Protein_226 | IS21 family transposase IS100 | Transposase |
| AT852_RS27660 (AT852_27660) | 188550..188759 | - | 210 | Protein_227 | peptidoglycan-binding protein | - |
| AT852_RS27665 (AT852_27665) | 188809..189060 | - | 252 | WP_000433928.1 | transporter | - |
| AT852_RS27680 (AT852_27680) | 189566..190263 | + | 698 | WP_237158204.1 | IS1 family transposase IS1S | Transposase |
| AT852_RS27685 (AT852_27685) | 190273..190818 | + | 546 | Protein_230 | IS66 family transposase ISEc49 | Transposase |
| AT852_RS27690 (AT852_27690) | 190893..191690 | - | 798 | WP_000544833.1 | IS21 family transposase IS21 | Transposase |
| AT852_RS27695 (AT852_27695) | 191690..192805 | - | 1116 | WP_041031495.1 | IS21 family transposase IS21 | Transposase |
| AT852_RS27700 (AT852_27700) | 192873..194029 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| AT852_RS27710 (AT852_27710) | 194232..194663 | + | 432 | Protein_234 | IS66 family transposase ISEc49 | Transposase |
| AT852_RS27720 (AT852_27720) | 195406..197043 | + | 1638 | WP_000936807.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| AT852_RS27725 (AT852_27725) | 197251..197520 | + | 270 | WP_000079956.1 | type II toxin-antitoxin system antitoxin YacA | - |
| AT852_RS29140 | 197520..197689 | + | 170 | Protein_237 | type II toxin-antitoxin system toxin YacB | - |
| AT852_RS27730 (AT852_27730) | 197772..198362 | + | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| AT852_RS29145 (AT852_27740) | 198719..198985 | + | 267 | Protein_239 | IS66 family transposase ISCro1 | Transposase |
| AT852_RS27745 (AT852_27745) | 199048..200394 | + | 1347 | WP_000483769.1 | IS4 family transposase IS4 | Transposase |
| AT852_RS29150 (AT852_27750) | 200408..200599 | - | 192 | Protein_241 | IS66 family insertion sequence element accessory protein TnpB | - |
| AT852_RS27755 (AT852_27755) | 200597..200921 | + | 325 | Protein_242 | IS3 family transposase | - |
| AT852_RS27760 (AT852_27760) | 200951..203863 | - | 2913 | WP_011310378.1 | ankyrin repeat domain-containing protein | - |
| AT852_RS27770 (AT852_27770) | 204186..205342 | + | 1157 | WP_087879933.1 | IS3 family transposase IS600 | Transposase |
| AT852_RS27775 (AT852_27775) | 205613..206455 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| AT852_RS27780 (AT852_27780) | 206458..207546 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| AT852_RS27785 (AT852_27785) | 207551..208501 | + | 951 | WP_004970430.1 | virulence factor VirK | - |
| AT852_RS27790 (AT852_27790) | 208566..209510 | + | 945 | WP_004996485.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| AT852_RS27795 (AT852_27795) | 209664..210695 | - | 1032 | WP_005143225.1 | IS630 family transposase IS630 | Transposase |
| AT852_RS27800 (AT852_27800) | 210896..211378 | + | 483 | Protein_250 | IS66 family transposase ISCro1 | Transposase |
| AT852_RS27805 (AT852_27805) | 211634..212293 | - | 660 | Protein_251 | group II intron reverse transcriptase/maturase | - |
| AT852_RS27810 (AT852_27810) | 212247..213029 | + | 783 | Protein_252 | IS4 family transposase IS421 | Transposase |
| AT852_RS29155 (AT852_27820) | 213607..213945 | + | 339 | Protein_253 | antirestriction protein | - |
| AT852_RS26445 (AT852_26445) | 214011..214673 | + | 663 | WP_087879933.1 | IS3-like element IS600 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|