MGE detailed information
MGE type: Genomic_island MGE length: 12975 bp
Accession: NZ_CP023645 Location: 3526795..3539769 Organism: Shigella sonnei strain CFSAN030807 Replicon: chromosome
Accession: NZ_CP023645 Location: 3526795..3539769 Organism: Shigella sonnei strain CFSAN030807 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT852_RS19680 (3521953) | 3521953..3523008 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| AT852_RS19685 (3523079) | 3523079..3523864 | - | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| AT852_RS19690 (3523836) | 3523836..3525548 | + | 1713 | Protein_3537 | flagellar biosynthesis protein FlhA | - |
| AT852_RS19695 (3525671) | 3525671..3526168 | - | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| AT852_RS28345 (3526239) | 3526239..3526367 | - | 129 | Protein_3539 | ISAs1 family transposase | - |
| AT852_RS19705 (3526422) | 3526422..3527119 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| AT852_RS19710 (3527408) | 3527408..3528181 | - | 774 | WP_127148796.1 | hypothetical protein | VF |
| AT852_RS19715 (3528367) | 3528367..3528627 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| AT852_RS19720 (3528630) | 3528630..3528908 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| AT852_RS19725 (3529064) | 3529064..3529804 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AT852_RS19730 (3529775) | 3529775..3530542 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AT852_RS19735 (3530748) | 3530748..3531326 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AT852_RS19740 (3531566) | 3531566..3534010 | + | 2445 | WP_000973074.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| AT852_RS19745 (3534053) | 3534053..3534499 | - | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| AT852_RS19750 (3534680) | 3534680..3535450 | + | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| AT852_RS19755 (3535492) | 3535492..3536628 | - | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| AT852_RS19760 (3537097) | 3537097..3537474 | - | 378 | WP_001077737.1 | hypothetical protein | - |
| AT852_RS19765 (3537474) | 3537474..3537884 | - | 411 | WP_162772774.1 | hypothetical protein | - |
| AT852_RS19770 (3537922) | 3537922..3539058 | - | 1137 | Protein_3553 | ISAs1 family transposase ISEc1 | Transposase |
| AT852_RS19775 (3539320) | 3539320..3539769 | - | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| AT852_RS19780 (3539781) | 3539781..3543989 | - | 4209 | WP_000508696.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|