MGE detailed information
MGE type: Genomic_island MGE length: 23056 bp
Accession: NZ_CP023641 Location: 1297424..1320479 Organism: Pseudomonas mendocina strain MAE1-K Replicon: chromosome
Accession: NZ_CP023641 Location: 1297424..1320479 Organism: Pseudomonas mendocina strain MAE1-K Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO724_RS06200 () | 1293227..1294192 | - | 966 | WP_004424499.1 | 2-hydroxyacid dehydrogenase | - |
| CO724_RS06205 () | 1294272..1294901 | + | 630 | WP_004424497.1 | LysE family transporter | - |
| CO724_RS06210 () | 1294969..1296144 | - | 1176 | WP_096825624.1 | acetyl-CoA C-acyltransferase | - |
| CO724_RS06215 () | 1296336..1296845 | + | 510 | Protein_1232 | AMP-binding protein | - |
| CO724_RS06220 () | 1296951..1297349 | - | 399 | WP_003089120.1 | Hg(II)-responsive transcriptional regulator | - |
| CO724_RS06225 () | 1297424..1297741 | + | 318 | WP_087835822.1 | mercury transporter MerT | - |
| CO724_RS06230 () | 1297738..1298295 | - | 558 | WP_003100847.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CO724_RS06235 () | 1298289..1298660 | - | 372 | WP_003100853.1 | hypothetical protein | - |
| CO724_RS06240 () | 1298657..1299157 | - | 501 | WP_003100856.1 | hypothetical protein | - |
| CO724_RS06245 () | 1299154..1299480 | - | 327 | WP_003100858.1 | hypothetical protein | - |
| CO724_RS06250 () | 1299735..1300091 | - | 357 | WP_003465043.1 | cupin domain-containing protein | - |
| CO724_RS06255 () | 1300328..1300714 | - | 387 | WP_003100872.1 | DUF86 domain-containing protein | - |
| CO724_RS06260 () | 1300711..1301001 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| CO724_RS06270 () | 1301307..1302320 | - | 1014 | WP_096825625.1 | IS91 family transposase ISAzo26 | Transposase |
| CO724_RS06275 () | 1302565..1302645 | + | 81 | Protein_1243 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| CO724_RS06280 () | 1302756..1302923 | + | 168 | WP_090240746.1 | rubredoxin | - |
| CO724_RS06285 () | 1303241..1303408 | + | 168 | WP_096825626.1 | rubredoxin | - |
| CO724_RS06290 () | 1303473..1304621 | + | 1149 | WP_096825627.1 | FAD-dependent oxidoreductase | - |
| CO724_RS24320 () | 1304808..1304885 | + | 78 | Protein_1247 | integration host factor | - |
| CO724_RS06295 () | 1305455..1306366 | - | 912 | WP_096825628.1 | LysR family transcriptional regulator | - |
| CO724_RS06300 () | 1306472..1307434 | + | 963 | WP_029615472.1 | IS30 family transposase ISPsme1 | Transposase |
| CO724_RS06305 () | 1307553..1308500 | + | 948 | WP_198402251.1 | hypothetical protein | - |
| CO724_RS06310 () | 1308648..1311677 | - | 3030 | WP_096825629.1 | Tn3 family transposase ISPsy42 | Transposase |
| CO724_RS06315 () | 1311661..1312263 | - | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| CO724_RS06320 () | 1312455..1312832 | + | 378 | WP_003151133.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO724_RS06325 () | 1312813..1313148 | + | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CO724_RS06330 () | 1313163..1313497 | + | 335 | Protein_1255 | transposase | - |
| CO724_RS06335 () | 1313521..1313847 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| CO724_RS06340 () | 1313844..1314224 | + | 381 | WP_001054412.1 | hypothetical protein | - |
| CO724_RS06345 () | 1314342..1314677 | + | 336 | WP_096825630.1 | DUF3391 domain-containing protein | - |
| CO724_RS06350 () | 1314724..1315638 | + | 915 | WP_001736514.1 | HD domain-containing protein | - |
| CO724_RS06355 () | 1316048..1316287 | + | 240 | WP_034011918.1 | ribbon-helix-helix domain-containing protein | - |
| CO724_RS06360 () | 1316287..1316697 | + | 411 | WP_034011919.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| CO724_RS06365 () | 1316701..1319693 | + | 2993 | Protein_1262 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| CO724_RS06370 () | 1319742..1320479 | - | 738 | WP_034011920.1 | carbonic anhydrase | - |
| CO724_RS06375 () | 1320652..1321815 | + | 1164 | Protein_1264 | long-chain-fatty-acid--CoA ligase | - |
| CO724_RS06380 () | 1322033..1323826 | + | 1794 | WP_096825631.1 | DUF1302 domain-containing protein | - |
| CO724_RS06385 () | 1323859..1325226 | + | 1368 | WP_096827719.1 | DUF1329 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|