MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP023632 Location: 3794919..3801282 Organism: Mycobacterium tuberculosis strain TBDM2189 Replicon: chromosome
Accession: NZ_CP023632 Location: 3794919..3801282 Organism: Mycobacterium tuberculosis strain TBDM2189 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP489_RS18470 () | 3789975..3790628 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| CP489_RS18475 () | 3790667..3792172 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| CP489_RS18480 () | 3792177..3793067 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| CP489_RS18485 () | 3793076..3794876 | - | 1801 | Protein_3494 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CP489_RS18500 () | 3796267..3797256 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CP489_RS18505 () | 3797256..3798308 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| CP489_RS18510 () | 3799062..3799454 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CP489_RS18515 () | 3799454..3799729 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CP489_RS18520 () | 3799941..3801282 | + | 1342 | Protein_3500 | ISNCY family transposase ISRjo3 | Transposase |
| CP489_RS18525 () | 3801472..3803667 | + | 2196 | WP_010886168.1 | PE family protein | - |
| CP489_RS18530 () | 3803738..3804610 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| CP489_RS18535 () | 3804684..3805394 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |