MGE detailed information
MGE type: Prophage MGE length: 29413 bp
Accession: NZ_CP023621 Location: 3547412..3576824 Organism: Mycobacterium tuberculosis strain LN2900 Replicon: chromosome
Accession: NZ_CP023621 Location: 3547412..3576824 Organism: Mycobacterium tuberculosis strain LN2900 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP477_RS17360 () | 3542654..3544141 | + | 1488 | WP_003416624.1 | amidase | - |
| CP477_RS17365 () | 3544138..3545094 | - | 957 | WP_003416627.1 | epoxide hydrolase MesT | - |
| CP477_RS17370 () | 3545241..3546101 | + | 861 | WP_003416628.1 | alpha/beta hydrolase | - |
| CP477_RS17375 () | 3546076..3546591 | + | 516 | WP_003899950.1 | nitroreductase family deazaflavin-dependent oxidoreductase | - |
| CP477_RS17385 () | 3546831..3547124 | + | 294 | WP_003416635.1 | hypothetical protein | - |
| CP477_RS17390 () | 3547412..3548701 | + | 1290 | WP_070171107.1 | ATP-binding protein | - |
| CP477_RS17395 () | 3549048..3549482 | - | 435 | WP_003899952.1 | type II toxin-antitoxin system VapC family toxin | - |
| CP477_RS17400 () | 3549485..3549937 | - | 453 | WP_003899953.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CP477_RS17405 () | 3550168..3550512 | + | 345 | WP_003899954.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CP477_RS17410 () | 3550509..3550838 | + | 330 | WP_003899955.1 | XRE family transcriptional regulator | Antitoxin Detail |
| CP477_RS17415 () | 3551075..3552336 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP477_RS17420 () | 3552558..3553819 | + | 1262 | WP_087902221.1 | IS3 family transposase IS987 | Transposase |
| CP477_RS17425 () | 3554092..3554439 | + | 348 | WP_003899956.1 | DUF2384 domain-containing protein | - |
| CP477_RS17430 () | 3554436..3555056 | + | 621 | WP_003899957.1 | RES family NAD+ phosphorylase | - |
| CP477_RS17435 () | 3555216..3556481 | - | 1266 | WP_003902423.1 | hypothetical protein | - |
| CP477_RS17440 () | 3556649..3556858 | + | 210 | WP_003416778.1 | hypothetical protein | - |
| CP477_RS21925 () | 3556893..3557078 | + | 186 | WP_003908177.1 | hypothetical protein | - |
| CP477_RS17450 () | 3557105..3558139 | - | 1035 | WP_003416786.1 | IS30 family transposase ISLxc3 | Transposase |
| CP477_RS17455 () | 3558423..3558647 | - | 225 | WP_003416790.1 | hypothetical protein | - |
| CP477_RS17470 () | 3559354..3559818 | + | 465 | WP_003913440.1 | LLM class flavin-dependent oxidoreductase | - |
| CP477_RS17475 () | 3559988..3562966 | - | 2979 | WP_070171108.1 | UPF0182 family protein | - |
| CP477_RS17480 () | 3563058..3564080 | - | 1023 | WP_003416799.1 | PDZ domain-containing protein | - |
| CP477_RS17485 () | 3564158..3565570 | + | 1413 | Protein_3306 | zinc-dependent metalloprotease | - |
| CP477_RS17490 () | 3565609..3566475 | + | 867 | WP_021082912.1 | hypothetical protein | - |
| CP477_RS17495 () | 3566484..3566657 | - | 174 | WP_015456486.1 | hypothetical protein | - |
| CP477_RS17500 () | 3566812..3568155 | + | 1344 | WP_003416815.1 | AarF/ABC1/UbiB kinase family protein | - |
| CP477_RS17505 () | 3568189..3568467 | - | 279 | WP_003899963.1 | transcriptional regulator WhiB7 | - |
| CP477_RS17510 () | 3568897..3570999 | - | 2103 | WP_003416822.1 | ATP-dependent DNA helicase UvrD2 | - |
| CP477_RS17515 () | 3571123..3571377 | + | 255 | WP_003416827.1 | mycoredoxin Mrx1 | - |
| CP477_RS17520 () | 3571390..3572331 | - | 942 | WP_003899965.1 | NAD(+) diphosphatase | - |
| CP477_RS17525 () | 3572390..3573457 | - | 1068 | WP_003899966.1 | potassium channel family protein | - |
| CP477_RS17530 () | 3573519..3576824 | - | 3306 | WP_003416833.1 | ATP-dependent DNA helicase AdnB | - |
| CP477_RS17535 () | 3576821..3579988 | - | 3168 | WP_003899967.1 | ATP-dependent DNA helicase AdnA | - |
| CP477_RS17540 () | 3580074..3580283 | + | 210 | WP_003907005.1 | hypothetical protein | - |
| CP477_RS17545 () | 3580314..3581099 | + | 786 | WP_003899968.1 | lipase LipV | - |
| CP477_RS17550 () | 3581102..3581407 | + | 306 | WP_003416847.1 | MGMT family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA127 | NC_000962 | 3547618..3580495 | 0.003 |