MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP023620 Location: 3794876..3801239 Organism: Mycobacterium tuberculosis strain LN1856 Replicon: chromosome
Accession: NZ_CP023620 Location: 3794876..3801239 Organism: Mycobacterium tuberculosis strain LN1856 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP476_RS18480 () | 3789932..3790585 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| CP476_RS18485 () | 3790624..3792129 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| CP476_RS18490 () | 3792134..3793024 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| CP476_RS18495 () | 3793033..3794833 | - | 1801 | Protein_3498 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| CP476_RS18510 () | 3796224..3797213 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CP476_RS18515 () | 3797213..3798265 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| CP476_RS18520 () | 3799019..3799411 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CP476_RS18525 () | 3799411..3799686 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CP476_RS18530 () | 3799898..3801239 | + | 1342 | Protein_3504 | ISNCY family transposase ISRjo3 | Transposase |
| CP476_RS18535 () | 3801429..3803624 | + | 2196 | WP_096863753.1 | PE family protein | - |
| CP476_RS18540 () | 3803695..3804567 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| CP476_RS18545 () | 3804641..3805351 | + | 711 | WP_003417932.1 | phosphoglycerate mutase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |